Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trbv4A0A075B5I2 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trbv4A0A075B5I2 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trbv4A0A075B5I2 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trbv4A0A075B5I2 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trbv4A0A075B5I2 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Trbv4A0A075B5I2 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Trbv4A0A075B5I2 Gm10653-202ENSMUST00000139570 835 ntBASIC17.43■□□□□ 0.38
Trbv4A0A075B5I2 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Trbv4A0A075B5I2 Gm10698-201ENSMUST00000182663 604 ntBASIC17.43■□□□□ 0.38
Trbv4A0A075B5I2 Gm10517-202ENSMUST00000192970 758 ntBASIC17.43■□□□□ 0.38
Trbv4A0A075B5I2 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trbv4A0A075B5I2 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.43■□□□□ 0.38
Trbv4A0A075B5I2 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.43■□□□□ 0.38
Trbv4A0A075B5I2 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trbv4A0A075B5I2 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Trbv4A0A075B5I2 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trbv4A0A075B5I2 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trbv4A0A075B5I2 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trbv4A0A075B5I2 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Trbv4A0A075B5I2 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Trbv4A0A075B5I2 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trbv4A0A075B5I2 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trbv4A0A075B5I2 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trbv4A0A075B5I2 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trbv4A0A075B5I2 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.42■□□□□ 0.38
Trbv4A0A075B5I2 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trbv4A0A075B5I2 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Trbv4A0A075B5I2 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trbv4A0A075B5I2 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trbv4A0A075B5I2 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Trbv4A0A075B5I2 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trbv4A0A075B5I2 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trbv4A0A075B5I2 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.42■□□□□ 0.38
Trbv4A0A075B5I2 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.42■□□□□ 0.38
Trbv4A0A075B5I2 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.42■□□□□ 0.38
Trbv4A0A075B5I2 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trbv4A0A075B5I2 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.41■□□□□ 0.38
Trbv4A0A075B5I2 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trbv4A0A075B5I2 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.41■□□□□ 0.38
Trbv4A0A075B5I2 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trbv4A0A075B5I2 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trbv4A0A075B5I2 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Trbv4A0A075B5I2 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Trbv4A0A075B5I2 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trbv4A0A075B5I2 Gm15378-201ENSMUST00000121894 207 ntBASIC17.41■□□□□ 0.38
Trbv4A0A075B5I2 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.41■□□□□ 0.38
Trbv4A0A075B5I2 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.41■□□□□ 0.38
Trbv4A0A075B5I2 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trbv4A0A075B5I2 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trbv4A0A075B5I2 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Trbv4A0A075B5I2 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trbv4A0A075B5I2 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trbv4A0A075B5I2 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trbv4A0A075B5I2 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trbv4A0A075B5I2 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trbv4A0A075B5I2 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.4■□□□□ 0.38
Trbv4A0A075B5I2 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trbv4A0A075B5I2 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.4■□□□□ 0.38
Trbv4A0A075B5I2 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.4■□□□□ 0.38
Trbv4A0A075B5I2 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trbv4A0A075B5I2 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trbv4A0A075B5I2 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.4■□□□□ 0.38
Trbv4A0A075B5I2 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.39■□□□□ 0.38
Trbv4A0A075B5I2 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trbv4A0A075B5I2 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trbv4A0A075B5I2 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trbv4A0A075B5I2 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trbv4A0A075B5I2 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trbv4A0A075B5I2 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trbv4A0A075B5I2 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Trbv4A0A075B5I2 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trbv4A0A075B5I2 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trbv4A0A075B5I2 Gm20760-201ENSMUST00000179197 648 ntBASIC17.39■□□□□ 0.37
Trbv4A0A075B5I2 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trbv4A0A075B5I2 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Trbv4A0A075B5I2 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trbv4A0A075B5I2 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trbv4A0A075B5I2 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trbv4A0A075B5I2 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trbv4A0A075B5I2 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.38■□□□□ 0.37
Trbv4A0A075B5I2 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trbv4A0A075B5I2 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trbv4A0A075B5I2 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.38■□□□□ 0.37
Trbv4A0A075B5I2 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trbv4A0A075B5I2 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trbv4A0A075B5I2 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trbv4A0A075B5I2 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trbv4A0A075B5I2 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Trbv4A0A075B5I2 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.38■□□□□ 0.37
Trbv4A0A075B5I2 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trbv4A0A075B5I2 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.38■□□□□ 0.37
Trbv4A0A075B5I2 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbv4A0A075B5I2 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbv4A0A075B5I2 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbv4A0A075B5I2 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbv4A0A075B5I2 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbv4A0A075B5I2 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.37■□□□□ 0.37
Trbv4A0A075B5I2 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbv4A0A075B5I2 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms