Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Gm37385-201ENSMUST00000195223 387 ntBASIC5.69□□□□□ -1.5
Nubp1Q9R060 Gm37089-201ENSMUST00000195616 129 ntBASIC5.69□□□□□ -1.5
Nubp1Q9R060 Gm44324-201ENSMUST00000198517 135 ntBASIC5.69□□□□□ -1.5
Nubp1Q9R060 Gm45513-201ENSMUST00000210228 376 ntBASIC5.69□□□□□ -1.5
Nubp1Q9R060 Olfr628-202ENSMUST00000218266 951 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Nubp1Q9R060 AC123618.1-201ENSMUST00000220174 360 ntBASIC5.69□□□□□ -1.5
Nubp1Q9R060 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC5.69□□□□□ -1.5
Nubp1Q9R060 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Nubp1Q9R060 Mir471-201ENSMUST00000093596 67 ntBASIC5.69□□□□□ -1.5
Nubp1Q9R060 Olfr243-201ENSMUST00000098194 951 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Nubp1Q9R060 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Nubp1Q9R060 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Nubp1Q9R060 Olfr488-202ENSMUST00000211508 4624 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
Nubp1Q9R060 Olfr488-203ENSMUST00000215173 4605 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
Nubp1Q9R060 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Nubp1Q9R060 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Nubp1Q9R060 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Nubp1Q9R060 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Nubp1Q9R060 Gm37255-201ENSMUST00000193302 3060 ntBASIC5.69□□□□□ -1.5
Nubp1Q9R060 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
Nubp1Q9R060 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Nubp1Q9R060 Gm9226-201ENSMUST00000188352 3489 ntBASIC5.69□□□□□ -1.5
Nubp1Q9R060 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Nubp1Q9R060 Olfr432-203ENSMUST00000213381 4533 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Nubp1Q9R060 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Nubp1Q9R060 Trove2-202ENSMUST00000159879 8738 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Nubp1Q9R060 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Nubp1Q9R060 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Nubp1Q9R060 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Nubp1Q9R060 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Nubp1Q9R060 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Nubp1Q9R060 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Nubp1Q9R060 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC5.68□□□□□ -1.5
Nubp1Q9R060 AC165260.6-206ENSMUST00000223884 3698 ntBASIC5.68□□□□□ -1.5
Nubp1Q9R060 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
Nubp1Q9R060 AC141476.1-201ENSMUST00000224988 3387 ntBASIC5.68□□□□□ -1.5
Nubp1Q9R060 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Nubp1Q9R060 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Nubp1Q9R060 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Nubp1Q9R060 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC5.68□□□□□ -1.5
Nubp1Q9R060 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Nubp1Q9R060 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC5.68□□□□□ -1.5
Nubp1Q9R060 Gm15752-201ENSMUST00000117427 394 ntBASIC5.68□□□□□ -1.5
Nubp1Q9R060 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC5.68□□□□□ -1.5
Nubp1Q9R060 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Nubp1Q9R060 Gm12191-201ENSMUST00000118307 348 ntBASIC5.68□□□□□ -1.5
Nubp1Q9R060 Gm9703-201ENSMUST00000119573 343 ntBASIC5.68□□□□□ -1.5
Nubp1Q9R060 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC5.68□□□□□ -1.5
Nubp1Q9R060 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC5.68□□□□□ -1.5
Nubp1Q9R060 Gm12115-201ENSMUST00000119969 447 ntBASIC5.68□□□□□ -1.5
Nubp1Q9R060 Gm16423-201ENSMUST00000120078 947 ntBASIC5.68□□□□□ -1.5
Nubp1Q9R060 Gm12237-201ENSMUST00000120158 470 ntBASIC5.68□□□□□ -1.5
Nubp1Q9R060 Gm13214-201ENSMUST00000122137 408 ntBASIC5.68□□□□□ -1.5
Nubp1Q9R060 Gm3810-201ENSMUST00000122413 476 ntBASIC5.68□□□□□ -1.5
Nubp1Q9R060 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC5.68□□□□□ -1.5
Nubp1Q9R060 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC5.68□□□□□ -1.5
Nubp1Q9R060 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC5.68□□□□□ -1.5
Nubp1Q9R060 Gm22145-201ENSMUST00000157396 148 ntBASIC5.68□□□□□ -1.5
Nubp1Q9R060 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC5.68□□□□□ -1.5
Nubp1Q9R060 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Nubp1Q9R060 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Nubp1Q9R060 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC5.68□□□□□ -1.5
Nubp1Q9R060 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC5.68□□□□□ -1.5
Nubp1Q9R060 Gm27545-201ENSMUST00000184755 202 ntBASIC5.68□□□□□ -1.5
Nubp1Q9R060 Gm43354-201ENSMUST00000196862 346 ntBASIC5.68□□□□□ -1.5
Nubp1Q9R060 Gm42814-201ENSMUST00000199370 460 ntBASIC5.68□□□□□ -1.5
Nubp1Q9R060 AC133650.1-201ENSMUST00000217243 578 ntBASIC5.68□□□□□ -1.5
Nubp1Q9R060 AC153646.2-201ENSMUST00000220516 109 ntBASIC5.68□□□□□ -1.5
Nubp1Q9R060 Gm9269-201ENSMUST00000221661 578 ntBASIC5.68□□□□□ -1.5
Nubp1Q9R060 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC5.68□□□□□ -1.5
Nubp1Q9R060 Gm24454-201ENSMUST00000083349 132 ntBASIC5.68□□□□□ -1.5
Nubp1Q9R060 n-R5s58-201ENSMUST00000093682 119 ntBASIC5.68□□□□□ -1.5
Nubp1Q9R060 Gm10343-201ENSMUST00000096279 348 ntBASIC5.68□□□□□ -1.5
Nubp1Q9R060 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Nubp1Q9R060 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Nubp1Q9R060 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Nubp1Q9R060 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Nubp1Q9R060 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Nubp1Q9R060 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Nubp1Q9R060 AC112142.1-203ENSMUST00000228670 2472 ntBASIC5.68□□□□□ -1.5
Nubp1Q9R060 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Nubp1Q9R060 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Nubp1Q9R060 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Nubp1Q9R060 AC163660.4-201ENSMUST00000224983 2171 ntBASIC5.67□□□□□ -1.5
Nubp1Q9R060 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Nubp1Q9R060 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Nubp1Q9R060 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Nubp1Q9R060 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Nubp1Q9R060 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Nubp1Q9R060 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
Nubp1Q9R060 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Nubp1Q9R060 AC153144.1-201ENSMUST00000221759 3139 ntBASIC5.67□□□□□ -1.5
Nubp1Q9R060 Gm44215-201ENSMUST00000204910 2711 ntBASIC5.67□□□□□ -1.5
Nubp1Q9R060 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Nubp1Q9R060 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Nubp1Q9R060 Gm12901-201ENSMUST00000118690 532 ntBASIC5.67□□□□□ -1.5
Nubp1Q9R060 Gm15786-201ENSMUST00000121079 450 ntBASIC5.67□□□□□ -1.5
Nubp1Q9R060 Gm15244-201ENSMUST00000121122 130 ntBASIC5.67□□□□□ -1.5
Nubp1Q9R060 Gm14846-201ENSMUST00000121868 216 ntBASIC5.67□□□□□ -1.5
Nubp1Q9R060 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC5.67□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms