Protein–RNA interactions for Protein: Q9CWY9

Rpain, RPA-interacting protein, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpainQ9CWY9 Gm29818-201ENSMUST00000218070 165 ntBASIC5.18□□□□□ -1.58
RpainQ9CWY9 AC153532.3-201ENSMUST00000218660 3848 ntBASIC5.18□□□□□ -1.58
RpainQ9CWY9 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC5.18□□□□□ -1.58
RpainQ9CWY9 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC5.18□□□□□ -1.58
RpainQ9CWY9 Gm4263-202ENSMUST00000221392 667 ntBASIC5.18□□□□□ -1.58
RpainQ9CWY9 AC174776.1-201ENSMUST00000221509 405 ntBASIC5.18□□□□□ -1.58
RpainQ9CWY9 AC174776.2-201ENSMUST00000222561 405 ntBASIC5.18□□□□□ -1.58
RpainQ9CWY9 AC154335.1-201ENSMUST00000224744 395 ntBASIC5.18□□□□□ -1.58
RpainQ9CWY9 AC165953.1-201ENSMUST00000226386 357 ntBASIC5.18□□□□□ -1.58
RpainQ9CWY9 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
RpainQ9CWY9 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
RpainQ9CWY9 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RpainQ9CWY9 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
RpainQ9CWY9 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC5.18□□□□□ -1.58
RpainQ9CWY9 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RpainQ9CWY9 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
RpainQ9CWY9 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC5.18□□□□□ -1.58
RpainQ9CWY9 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
RpainQ9CWY9 Gm43313-201ENSMUST00000201398 2235 ntBASIC5.17□□□□□ -1.58
RpainQ9CWY9 Gm45129-201ENSMUST00000208444 2224 ntBASIC5.17□□□□□ -1.58
RpainQ9CWY9 Olfr131-202ENSMUST00000172933 1358 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
RpainQ9CWY9 Gm43065-201ENSMUST00000198971 2092 ntBASIC5.17□□□□□ -1.58
RpainQ9CWY9 Gm38032-201ENSMUST00000195052 1589 ntBASIC5.17□□□□□ -1.58
RpainQ9CWY9 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
RpainQ9CWY9 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC5.17□□□□□ -1.58
RpainQ9CWY9 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RpainQ9CWY9 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
RpainQ9CWY9 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RpainQ9CWY9 Gm22266-201ENSMUST00000104011 138 ntBASIC5.17□□□□□ -1.58
RpainQ9CWY9 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
RpainQ9CWY9 Gm24275-201ENSMUST00000116780 146 ntBASIC5.17□□□□□ -1.58
RpainQ9CWY9 Gm14050-201ENSMUST00000117052 346 ntBASIC5.17□□□□□ -1.58
RpainQ9CWY9 Gm12760-201ENSMUST00000117861 482 ntBASIC5.17□□□□□ -1.58
RpainQ9CWY9 Gm14835-201ENSMUST00000119039 315 ntBASIC5.17□□□□□ -1.58
RpainQ9CWY9 Gm12186-201ENSMUST00000119050 945 ntBASIC5.17□□□□□ -1.58
RpainQ9CWY9 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC5.17□□□□□ -1.58
RpainQ9CWY9 n-R5s98-201ENSMUST00000122549 119 ntBASIC5.17□□□□□ -1.58
RpainQ9CWY9 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC5.17□□□□□ -1.58
RpainQ9CWY9 1700061F12Rik-201ENSMUST00000132414 876 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RpainQ9CWY9 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC5.17□□□□□ -1.58
RpainQ9CWY9 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC5.17□□□□□ -1.58
RpainQ9CWY9 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC5.17□□□□□ -1.58
RpainQ9CWY9 Gm25383-201ENSMUST00000157810 144 ntBASIC5.17□□□□□ -1.58
RpainQ9CWY9 Gm23965-201ENSMUST00000157969 142 ntBASIC5.17□□□□□ -1.58
RpainQ9CWY9 Gm25603-201ENSMUST00000158361 105 ntBASIC5.17□□□□□ -1.58
RpainQ9CWY9 Gm22675-201ENSMUST00000158430 104 ntBASIC5.17□□□□□ -1.58
RpainQ9CWY9 Gm15974-201ENSMUST00000159103 531 ntBASIC5.17□□□□□ -1.58
RpainQ9CWY9 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC5.17□□□□□ -1.58
RpainQ9CWY9 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC5.17□□□□□ -1.58
RpainQ9CWY9 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RpainQ9CWY9 Gm22355-201ENSMUST00000175531 96 ntBASIC5.17□□□□□ -1.58
RpainQ9CWY9 Gm25451-201ENSMUST00000177832 121 ntBASIC5.17□□□□□ -1.58
RpainQ9CWY9 Gm5709-201ENSMUST00000177879 1165 ntBASIC5.17□□□□□ -1.58
RpainQ9CWY9 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
RpainQ9CWY9 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC5.17□□□□□ -1.58
RpainQ9CWY9 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC5.17□□□□□ -1.58
RpainQ9CWY9 Gm28141-201ENSMUST00000186676 342 ntBASIC5.17□□□□□ -1.58
RpainQ9CWY9 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC5.17□□□□□ -1.58
RpainQ9CWY9 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC5.17□□□□□ -1.58
RpainQ9CWY9 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC5.17□□□□□ -1.58
RpainQ9CWY9 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC5.17□□□□□ -1.58
RpainQ9CWY9 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC5.17□□□□□ -1.58
RpainQ9CWY9 Gm37070-201ENSMUST00000193272 460 ntBASIC5.17□□□□□ -1.58
RpainQ9CWY9 Gm44468-201ENSMUST00000199516 105 ntBASIC5.17□□□□□ -1.58
RpainQ9CWY9 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC5.17□□□□□ -1.58
RpainQ9CWY9 Gm44060-201ENSMUST00000204440 410 ntBASIC5.17□□□□□ -1.58
RpainQ9CWY9 Gm44523-201ENSMUST00000205616 417 ntBASIC5.17□□□□□ -1.58
RpainQ9CWY9 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC5.17□□□□□ -1.58
RpainQ9CWY9 AC154506.1-201ENSMUST00000225178 621 ntBASIC5.17□□□□□ -1.58
RpainQ9CWY9 AC122448.1-201ENSMUST00000226317 772 ntBASIC5.17□□□□□ -1.58
RpainQ9CWY9 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
RpainQ9CWY9 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
RpainQ9CWY9 Gm16415-201ENSMUST00000080097 489 ntBASIC5.17□□□□□ -1.58
RpainQ9CWY9 Gm10916-201ENSMUST00000080330 483 ntBASIC5.17□□□□□ -1.58
RpainQ9CWY9 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
RpainQ9CWY9 n-R5s13-201ENSMUST00000093707 119 ntBASIC5.17□□□□□ -1.58
RpainQ9CWY9 Gm37767-201ENSMUST00000193239 1834 ntBASIC5.17□□□□□ -1.58
RpainQ9CWY9 Zfp950-207ENSMUST00000180544 2568 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
RpainQ9CWY9 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
RpainQ9CWY9 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RpainQ9CWY9 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RpainQ9CWY9 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
RpainQ9CWY9 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RpainQ9CWY9 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RpainQ9CWY9 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RpainQ9CWY9 Gm43668-201ENSMUST00000197014 5342 ntBASIC5.16□□□□□ -1.58
RpainQ9CWY9 Gm29293-201ENSMUST00000189416 2188 ntBASIC5.16□□□□□ -1.58
RpainQ9CWY9 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RpainQ9CWY9 AC124446.1-201ENSMUST00000221027 2644 ntBASIC5.16□□□□□ -1.58
RpainQ9CWY9 Gm37588-201ENSMUST00000195024 2496 ntBASIC5.16□□□□□ -1.58
RpainQ9CWY9 Vmn2r-ps11-201ENSMUST00000176568 2730 ntBASIC5.16□□□□□ -1.58
RpainQ9CWY9 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC5.16□□□□□ -1.58
RpainQ9CWY9 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
RpainQ9CWY9 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC5.16□□□□□ -1.58
RpainQ9CWY9 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC5.16□□□□□ -1.58
RpainQ9CWY9 Gm13491-201ENSMUST00000118267 235 ntBASIC5.16□□□□□ -1.58
RpainQ9CWY9 Gm9308-201ENSMUST00000119073 448 ntBASIC5.16□□□□□ -1.58
RpainQ9CWY9 Gm2768-201ENSMUST00000121062 250 ntBASIC5.16□□□□□ -1.58
RpainQ9CWY9 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC5.16□□□□□ -1.58
RpainQ9CWY9 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms