Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Clp1Q99LI9 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Clp1Q99LI9 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Clp1Q99LI9 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Clp1Q99LI9 AC121960.2-201ENSMUST00000227349 3446 ntBASIC5.75□□□□□ -1.49
Clp1Q99LI9 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Clp1Q99LI9 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Clp1Q99LI9 Gm38190-201ENSMUST00000192350 4755 ntBASIC5.75□□□□□ -1.49
Clp1Q99LI9 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Clp1Q99LI9 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Clp1Q99LI9 Gm40020-201ENSMUST00000215677 1635 ntBASIC5.74□□□□□ -1.49
Clp1Q99LI9 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Clp1Q99LI9 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Clp1Q99LI9 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Clp1Q99LI9 Mir599-201ENSMUST00000102378 88 ntBASIC5.74□□□□□ -1.49
Clp1Q99LI9 Gm22266-201ENSMUST00000104011 138 ntBASIC5.74□□□□□ -1.49
Clp1Q99LI9 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC5.74□□□□□ -1.49
Clp1Q99LI9 Gm14046-201ENSMUST00000119389 509 ntBASIC5.74□□□□□ -1.49
Clp1Q99LI9 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC5.74□□□□□ -1.49
Clp1Q99LI9 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC5.74□□□□□ -1.49
Clp1Q99LI9 Gm23499-201ENSMUST00000157736 268 ntBASIC5.74□□□□□ -1.49
Clp1Q99LI9 Gm25865-201ENSMUST00000158247 104 ntBASIC5.74□□□□□ -1.49
Clp1Q99LI9 Gm16038-201ENSMUST00000159317 193 ntBASIC5.74□□□□□ -1.49
Clp1Q99LI9 Gm15914-201ENSMUST00000161922 309 ntBASIC5.74□□□□□ -1.49
Clp1Q99LI9 Gm17148-201ENSMUST00000164702 249 ntBASIC5.74□□□□□ -1.49
Clp1Q99LI9 Gm20673-201ENSMUST00000177167 430 ntBASIC5.74□□□□□ -1.49
Clp1Q99LI9 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Clp1Q99LI9 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Clp1Q99LI9 Gm38040-201ENSMUST00000193505 225 ntBASIC5.74□□□□□ -1.49
Clp1Q99LI9 Gm42776-201ENSMUST00000198031 406 ntBASIC5.74□□□□□ -1.49
Clp1Q99LI9 Gm18924-201ENSMUST00000211929 316 ntBASIC5.74□□□□□ -1.49
Clp1Q99LI9 AL450317.1-201ENSMUST00000213941 291 ntBASIC5.74□□□□□ -1.49
Clp1Q99LI9 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Clp1Q99LI9 AC123064.1-201ENSMUST00000218950 406 ntBASIC5.74□□□□□ -1.49
Clp1Q99LI9 AC117588.2-201ENSMUST00000228340 311 ntBASIC5.74□□□□□ -1.49
Clp1Q99LI9 n-R5s88-201ENSMUST00000083173 118 ntBASIC5.74□□□□□ -1.49
Clp1Q99LI9 Gm6177-201ENSMUST00000085589 465 ntBASIC5.74□□□□□ -1.49
Clp1Q99LI9 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Clp1Q99LI9 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Clp1Q99LI9 AC117769.3-201ENSMUST00000225814 1664 ntBASIC5.74□□□□□ -1.49
Clp1Q99LI9 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Clp1Q99LI9 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC5.74□□□□□ -1.49
Clp1Q99LI9 Gm4855-201ENSMUST00000192270 1967 ntBASIC5.74□□□□□ -1.49
Clp1Q99LI9 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Clp1Q99LI9 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Clp1Q99LI9 Gm21122-201ENSMUST00000191548 3452 ntBASIC5.74□□□□□ -1.49
Clp1Q99LI9 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Clp1Q99LI9 Gm43175-201ENSMUST00000198450 3810 ntBASIC5.74□□□□□ -1.49
Clp1Q99LI9 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
Clp1Q99LI9 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC5.74□□□□□ -1.49
Clp1Q99LI9 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Clp1Q99LI9 Btbd35f2-201ENSMUST00000179991 1949 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Clp1Q99LI9 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Clp1Q99LI9 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Clp1Q99LI9 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Clp1Q99LI9 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Clp1Q99LI9 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Clp1Q99LI9 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC5.73□□□□□ -1.49
Clp1Q99LI9 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
Clp1Q99LI9 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Clp1Q99LI9 Gm43260-201ENSMUST00000197378 2430 ntBASIC5.73□□□□□ -1.49
Clp1Q99LI9 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Clp1Q99LI9 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Clp1Q99LI9 Gm14857-201ENSMUST00000117862 3185 ntBASIC5.73□□□□□ -1.49
Clp1Q99LI9 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Clp1Q99LI9 Gm43527-201ENSMUST00000198749 3178 ntBASIC5.73□□□□□ -1.49
Clp1Q99LI9 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Clp1Q99LI9 Gm25418-201ENSMUST00000104214 129 ntBASIC5.73□□□□□ -1.49
Clp1Q99LI9 Gm22021-201ENSMUST00000104353 107 ntBASIC5.73□□□□□ -1.49
Clp1Q99LI9 Gm11430-201ENSMUST00000121317 217 ntBASIC5.73□□□□□ -1.49
Clp1Q99LI9 n-R5s174-201ENSMUST00000122638 121 ntBASIC5.73□□□□□ -1.49
Clp1Q99LI9 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC5.73□□□□□ -1.49
Clp1Q99LI9 Gm22870-201ENSMUST00000157501 112 ntBASIC5.73□□□□□ -1.49
Clp1Q99LI9 Gm23631-201ENSMUST00000175291 123 ntBASIC5.73□□□□□ -1.49
Clp1Q99LI9 Gm26430-201ENSMUST00000178054 107 ntBASIC5.73□□□□□ -1.49
Clp1Q99LI9 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Clp1Q99LI9 Gm21978-201ENSMUST00000179696 377 ntBASIC5.73□□□□□ -1.49
Clp1Q99LI9 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Clp1Q99LI9 Gm27148-201ENSMUST00000185086 160 ntBASIC5.73□□□□□ -1.49
Clp1Q99LI9 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC5.73□□□□□ -1.49
Clp1Q99LI9 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC5.73□□□□□ -1.49
Clp1Q99LI9 Gm37732-201ENSMUST00000194377 316 ntBASIC5.73□□□□□ -1.49
Clp1Q99LI9 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC5.73□□□□□ -1.49
Clp1Q99LI9 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC5.73□□□□□ -1.49
Clp1Q99LI9 Gm44092-201ENSMUST00000204470 258 ntBASIC5.73□□□□□ -1.49
Clp1Q99LI9 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC5.73□□□□□ -1.49
Clp1Q99LI9 Gm45032-201ENSMUST00000205375 520 ntBASIC5.73□□□□□ -1.49
Clp1Q99LI9 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC5.73□□□□□ -1.49
Clp1Q99LI9 Gm44959-201ENSMUST00000209127 231 ntBASIC5.73□□□□□ -1.49
Clp1Q99LI9 AC123064.2-201ENSMUST00000217758 193 ntBASIC5.73□□□□□ -1.49
Clp1Q99LI9 AL672194.1-201ENSMUST00000224841 603 ntBASIC5.73□□□□□ -1.49
Clp1Q99LI9 AC154788.1-201ENSMUST00000225003 340 ntBASIC5.73□□□□□ -1.49
Clp1Q99LI9 AC126439.1-201ENSMUST00000226772 2104 ntBASIC5.73□□□□□ -1.49
Clp1Q99LI9 n-R5s65-201ENSMUST00000082614 117 ntBASIC5.73□□□□□ -1.49
Clp1Q99LI9 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Clp1Q99LI9 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Clp1Q99LI9 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Clp1Q99LI9 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Clp1Q99LI9 Gm45179-201ENSMUST00000208452 4337 ntBASIC5.73□□□□□ -1.49
Clp1Q99LI9 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms