Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm21599-201ENSMUST00000178249 498 ntBASIC6.16□□□□□ -1.42
Trim47Q8C0E3 Gm21914-201ENSMUST00000178452 498 ntBASIC6.16□□□□□ -1.42
Trim47Q8C0E3 Gm21723-201ENSMUST00000178692 498 ntBASIC6.16□□□□□ -1.42
Trim47Q8C0E3 Gm21916-201ENSMUST00000178771 498 ntBASIC6.16□□□□□ -1.42
Trim47Q8C0E3 Gm21801-201ENSMUST00000178865 498 ntBASIC6.16□□□□□ -1.42
Trim47Q8C0E3 Gm21633-201ENSMUST00000178941 498 ntBASIC6.16□□□□□ -1.42
Trim47Q8C0E3 Gm21821-201ENSMUST00000179646 498 ntBASIC6.16□□□□□ -1.42
Trim47Q8C0E3 Gm21588-201ENSMUST00000180074 498 ntBASIC6.16□□□□□ -1.42
Trim47Q8C0E3 Gm21780-201ENSMUST00000180128 498 ntBASIC6.16□□□□□ -1.42
Trim47Q8C0E3 Gm21572-201ENSMUST00000180134 498 ntBASIC6.16□□□□□ -1.42
Trim47Q8C0E3 Gm21529-201ENSMUST00000180175 498 ntBASIC6.16□□□□□ -1.42
Trim47Q8C0E3 Gm27521-201ENSMUST00000184022 64 ntBASIC6.16□□□□□ -1.42
Trim47Q8C0E3 Gm29370-202ENSMUST00000187476 499 ntBASIC6.16□□□□□ -1.42
Trim47Q8C0E3 Gm29014-201ENSMUST00000191422 326 ntBASIC6.16□□□□□ -1.42
Trim47Q8C0E3 Gm18791-201ENSMUST00000204611 726 ntBASIC6.16□□□□□ -1.42
Trim47Q8C0E3 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC6.16□□□□□ -1.42
Trim47Q8C0E3 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Trim47Q8C0E3 Gm29785-201ENSMUST00000217033 383 ntBASIC6.16□□□□□ -1.42
Trim47Q8C0E3 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC6.16□□□□□ -1.42
Trim47Q8C0E3 AC139758.1-201ENSMUST00000226573 930 ntBASIC6.16□□□□□ -1.42
Trim47Q8C0E3 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Trim47Q8C0E3 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Trim47Q8C0E3 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC6.16□□□□□ -1.42
Trim47Q8C0E3 Gm25792-201ENSMUST00000083289 100 ntBASIC6.16□□□□□ -1.42
Trim47Q8C0E3 Gm15583-201ENSMUST00000116191 3510 ntBASIC6.16□□□□□ -1.42
Trim47Q8C0E3 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Trim47Q8C0E3 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Trim47Q8C0E3 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC6.16□□□□□ -1.42
Trim47Q8C0E3 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trim47Q8C0E3 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Trim47Q8C0E3 Olfr364-ps1-201ENSMUST00000104995 1766 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Trim47Q8C0E3 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trim47Q8C0E3 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trim47Q8C0E3 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Trim47Q8C0E3 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trim47Q8C0E3 LOC102637012-201ENSMUST00000217248 2562 ntBASIC6.15□□□□□ -1.42
Trim47Q8C0E3 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Trim47Q8C0E3 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Trim47Q8C0E3 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Trim47Q8C0E3 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Trim47Q8C0E3 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Trim47Q8C0E3 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Trim47Q8C0E3 Gm24605-201ENSMUST00000104772 96 ntBASIC6.15□□□□□ -1.42
Trim47Q8C0E3 Gm14628-201ENSMUST00000117508 635 ntBASIC6.15□□□□□ -1.42
Trim47Q8C0E3 Gm25824-201ENSMUST00000157092 121 ntBASIC6.15□□□□□ -1.42
Trim47Q8C0E3 Gm16569-201ENSMUST00000160526 314 ntBASIC6.15□□□□□ -1.42
Trim47Q8C0E3 Gm17511-201ENSMUST00000172206 342 ntBASIC6.15□□□□□ -1.42
Trim47Q8C0E3 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC6.15□□□□□ -1.42
Trim47Q8C0E3 Gm25749-201ENSMUST00000175485 111 ntBASIC6.15□□□□□ -1.42
Trim47Q8C0E3 Gm20630-201ENSMUST00000177387 551 ntBASIC6.15□□□□□ -1.42
Trim47Q8C0E3 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC6.15□□□□□ -1.42
Trim47Q8C0E3 Gm18964-201ENSMUST00000193013 563 ntBASIC6.15□□□□□ -1.42
Trim47Q8C0E3 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC6.15□□□□□ -1.42
Trim47Q8C0E3 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC6.15□□□□□ -1.42
Trim47Q8C0E3 Gm21937-201ENSMUST00000222825 218 ntBASIC6.15□□□□□ -1.42
Trim47Q8C0E3 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Trim47Q8C0E3 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Trim47Q8C0E3 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Trim47Q8C0E3 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC6.15□□□□□ -1.42
Trim47Q8C0E3 Mir134-201ENSMUST00000083492 71 ntBASIC6.15□□□□□ -1.42
Trim47Q8C0E3 Gm7676-201ENSMUST00000084055 319 ntBASIC6.15□□□□□ -1.42
Trim47Q8C0E3 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Trim47Q8C0E3 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Trim47Q8C0E3 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC6.15□□□□□ -1.43
Trim47Q8C0E3 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Trim47Q8C0E3 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Trim47Q8C0E3 Gm37248-201ENSMUST00000193576 3174 ntBASIC6.15□□□□□ -1.43
Trim47Q8C0E3 Gm37880-201ENSMUST00000192216 3257 ntBASIC6.15□□□□□ -1.43
Trim47Q8C0E3 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC6.15□□□□□ -1.43
Trim47Q8C0E3 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Trim47Q8C0E3 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Trim47Q8C0E3 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Trim47Q8C0E3 Serpinb5-202ENSMUST00000112729 2531 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Trim47Q8C0E3 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Trim47Q8C0E3 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Trim47Q8C0E3 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC6.14□□□□□ -1.43
Trim47Q8C0E3 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Trim47Q8C0E3 Olfr1295-203ENSMUST00000217772 5539 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Trim47Q8C0E3 Gm43359-201ENSMUST00000197944 2200 ntBASIC6.14□□□□□ -1.43
Trim47Q8C0E3 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Trim47Q8C0E3 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
Trim47Q8C0E3 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC6.14□□□□□ -1.43
Trim47Q8C0E3 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Trim47Q8C0E3 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Trim47Q8C0E3 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC6.14□□□□□ -1.43
Trim47Q8C0E3 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC6.14□□□□□ -1.43
Trim47Q8C0E3 AC112142.1-203ENSMUST00000228670 2472 ntBASIC6.14□□□□□ -1.43
Trim47Q8C0E3 Gm37846-201ENSMUST00000191840 3774 ntBASIC6.14□□□□□ -1.43
Trim47Q8C0E3 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC6.14□□□□□ -1.43
Trim47Q8C0E3 Gm14831-201ENSMUST00000120253 409 ntBASIC6.14□□□□□ -1.43
Trim47Q8C0E3 Gm14049-201ENSMUST00000121009 636 ntBASIC6.14□□□□□ -1.43
Trim47Q8C0E3 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC6.14□□□□□ -1.43
Trim47Q8C0E3 Gm3027-201ENSMUST00000167579 451 ntBASIC6.14□□□□□ -1.43
Trim47Q8C0E3 Gm3104-201ENSMUST00000171004 473 ntBASIC6.14□□□□□ -1.43
Trim47Q8C0E3 Mir3066-201ENSMUST00000175296 83 ntBASIC6.14□□□□□ -1.43
Trim47Q8C0E3 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Trim47Q8C0E3 Gm22307-201ENSMUST00000180019 107 ntBASIC6.14□□□□□ -1.43
Trim47Q8C0E3 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC6.14□□□□□ -1.43
Trim47Q8C0E3 Gm9022-202ENSMUST00000183285 483 ntBASIC6.14□□□□□ -1.43
Trim47Q8C0E3 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC6.14□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms