Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Gm25088-201ENSMUST00000101803 79 ntBASIC5.83□□□□□ -1.48
Trim56Q80VI1 Mir759-201ENSMUST00000103254 98 ntBASIC5.83□□□□□ -1.48
Trim56Q80VI1 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC5.83□□□□□ -1.48
Trim56Q80VI1 Gm22194-201ENSMUST00000116869 95 ntBASIC5.83□□□□□ -1.48
Trim56Q80VI1 Mir467g-201ENSMUST00000116906 120 ntBASIC5.83□□□□□ -1.48
Trim56Q80VI1 Gm16089-201ENSMUST00000117679 336 ntBASIC5.83□□□□□ -1.48
Trim56Q80VI1 Gm11196-201ENSMUST00000119052 395 ntBASIC5.83□□□□□ -1.48
Trim56Q80VI1 Gm2005-201ENSMUST00000120759 542 ntBASIC5.83□□□□□ -1.48
Trim56Q80VI1 Gm14876-201ENSMUST00000120795 327 ntBASIC5.83□□□□□ -1.48
Trim56Q80VI1 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC5.83□□□□□ -1.48
Trim56Q80VI1 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Trim56Q80VI1 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC5.83□□□□□ -1.48
Trim56Q80VI1 Gm8121-201ENSMUST00000153583 499 ntBASIC5.83□□□□□ -1.48
Trim56Q80VI1 Gm23538-201ENSMUST00000157535 101 ntBASIC5.83□□□□□ -1.48
Trim56Q80VI1 Mir1946b-201ENSMUST00000157853 133 ntBASIC5.83□□□□□ -1.48
Trim56Q80VI1 Gm25335-201ENSMUST00000158043 103 ntBASIC5.83□□□□□ -1.48
Trim56Q80VI1 Gm24217-201ENSMUST00000158260 133 ntBASIC5.83□□□□□ -1.48
Trim56Q80VI1 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Trim56Q80VI1 Gm3531-201ENSMUST00000162698 489 ntBASIC5.83□□□□□ -1.48
Trim56Q80VI1 Gm20415-201ENSMUST00000172877 423 ntBASIC5.83□□□□□ -1.48
Trim56Q80VI1 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC5.83□□□□□ -1.48
Trim56Q80VI1 Gm14527-201ENSMUST00000179300 639 ntBASIC5.83□□□□□ -1.48
Trim56Q80VI1 Mir6401-201ENSMUST00000184499 109 ntBASIC5.83□□□□□ -1.48
Trim56Q80VI1 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC5.83□□□□□ -1.48
Trim56Q80VI1 Gm44409-201ENSMUST00000198810 166 ntBASIC5.83□□□□□ -1.48
Trim56Q80VI1 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC5.83□□□□□ -1.48
Trim56Q80VI1 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC5.83□□□□□ -1.48
Trim56Q80VI1 Gm45023-201ENSMUST00000207951 379 ntBASIC5.83□□□□□ -1.48
Trim56Q80VI1 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC5.83□□□□□ -1.48
Trim56Q80VI1 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC5.83□□□□□ -1.48
Trim56Q80VI1 Gm3816-201ENSMUST00000209803 433 ntBASIC5.83□□□□□ -1.48
Trim56Q80VI1 AC123944.2-201ENSMUST00000215290 382 ntBASIC5.83□□□□□ -1.48
Trim56Q80VI1 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC5.83□□□□□ -1.48
Trim56Q80VI1 Gm5023-201ENSMUST00000217442 587 ntBASIC5.83□□□□□ -1.48
Trim56Q80VI1 Gm4263-201ENSMUST00000220693 1101 ntBASIC5.83□□□□□ -1.48
Trim56Q80VI1 AC125543.1-201ENSMUST00000222778 101 ntBASIC5.83□□□□□ -1.48
Trim56Q80VI1 AC154224.1-201ENSMUST00000224367 403 ntBASIC5.83□□□□□ -1.48
Trim56Q80VI1 CT025689.4-201ENSMUST00000225926 601 ntBASIC5.83□□□□□ -1.48
Trim56Q80VI1 AC133910.1-201ENSMUST00000228128 624 ntBASIC5.83□□□□□ -1.48
Trim56Q80VI1 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Trim56Q80VI1 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Trim56Q80VI1 Gm23404-201ENSMUST00000082543 97 ntBASIC5.83□□□□□ -1.48
Trim56Q80VI1 Gm43281-201ENSMUST00000202522 2704 ntBASIC5.83□□□□□ -1.48
Trim56Q80VI1 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Trim56Q80VI1 AC153494.1-201ENSMUST00000218664 3041 ntBASIC5.83□□□□□ -1.48
Trim56Q80VI1 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC5.83□□□□□ -1.48
Trim56Q80VI1 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Trim56Q80VI1 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Trim56Q80VI1 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Trim56Q80VI1 Gm18913-201ENSMUST00000204311 1789 ntBASIC5.83□□□□□ -1.48
Trim56Q80VI1 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
Trim56Q80VI1 Olfr1238-203ENSMUST00000217237 5761 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Trim56Q80VI1 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Trim56Q80VI1 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Trim56Q80VI1 Gm37099-201ENSMUST00000191902 3451 ntBASIC5.82□□□□□ -1.48
Trim56Q80VI1 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Trim56Q80VI1 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Trim56Q80VI1 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Trim56Q80VI1 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
Trim56Q80VI1 Gm14909-201ENSMUST00000117853 351 ntBASIC5.82□□□□□ -1.48
Trim56Q80VI1 Gm14897-201ENSMUST00000118213 207 ntBASIC5.82□□□□□ -1.48
Trim56Q80VI1 Gm11409-201ENSMUST00000118621 403 ntBASIC5.82□□□□□ -1.48
Trim56Q80VI1 Gm12231-201ENSMUST00000119447 695 ntBASIC5.82□□□□□ -1.48
Trim56Q80VI1 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Trim56Q80VI1 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC5.82□□□□□ -1.48
Trim56Q80VI1 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Trim56Q80VI1 Gm24188-201ENSMUST00000157980 108 ntBASIC5.82□□□□□ -1.48
Trim56Q80VI1 Gm22529-201ENSMUST00000158817 123 ntBASIC5.82□□□□□ -1.48
Trim56Q80VI1 Gm24737-201ENSMUST00000158861 100 ntBASIC5.82□□□□□ -1.48
Trim56Q80VI1 Gm20767-201ENSMUST00000179071 510 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Trim56Q80VI1 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC5.82□□□□□ -1.48
Trim56Q80VI1 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC5.82□□□□□ -1.48
Trim56Q80VI1 Gm43524-201ENSMUST00000197278 298 ntBASIC5.82□□□□□ -1.48
Trim56Q80VI1 Gm43669-201ENSMUST00000198229 436 ntBASIC5.82□□□□□ -1.48
Trim56Q80VI1 Gm44463-201ENSMUST00000198895 137 ntBASIC5.82□□□□□ -1.48
Trim56Q80VI1 Gm43794-201ENSMUST00000200971 692 ntBASIC5.82□□□□□ -1.48
Trim56Q80VI1 Gm43976-201ENSMUST00000203637 235 ntBASIC5.82□□□□□ -1.48
Trim56Q80VI1 Gm43919-201ENSMUST00000204303 364 ntBASIC5.82□□□□□ -1.48
Trim56Q80VI1 Gm44687-201ENSMUST00000204975 235 ntBASIC5.82□□□□□ -1.48
Trim56Q80VI1 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC5.82□□□□□ -1.48
Trim56Q80VI1 Gm45375-201ENSMUST00000210338 280 ntBASIC5.82□□□□□ -1.48
Trim56Q80VI1 Gm45588-201ENSMUST00000211213 630 ntBASIC5.82□□□□□ -1.48
Trim56Q80VI1 AC156950.1-201ENSMUST00000219604 456 ntBASIC5.82□□□□□ -1.48
Trim56Q80VI1 AC124549.1-201ENSMUST00000225912 333 ntBASIC5.82□□□□□ -1.48
Trim56Q80VI1 AC126690.1-201ENSMUST00000228898 397 ntBASIC5.82□□□□□ -1.48
Trim56Q80VI1 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Trim56Q80VI1 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Trim56Q80VI1 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Trim56Q80VI1 Gm22229-201ENSMUST00000082987 108 ntBASIC5.82□□□□□ -1.48
Trim56Q80VI1 Gm26056-201ENSMUST00000083043 104 ntBASIC5.82□□□□□ -1.48
Trim56Q80VI1 Mir134-201ENSMUST00000083492 71 ntBASIC5.82□□□□□ -1.48
Trim56Q80VI1 Olfr1500-201ENSMUST00000067670 2092 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Trim56Q80VI1 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Trim56Q80VI1 Gm43266-201ENSMUST00000201049 1771 ntBASIC5.82□□□□□ -1.48
Trim56Q80VI1 Gm37456-201ENSMUST00000193176 5837 ntBASIC5.82□□□□□ -1.48
Trim56Q80VI1 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Trim56Q80VI1 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Trim56Q80VI1 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Trim56Q80VI1 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Trim56Q80VI1 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms