Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Trim28Q62318 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Trim28Q62318 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Trim28Q62318 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Trim28Q62318 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
Trim28Q62318 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Trim28Q62318 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Trim28Q62318 Gm11859-201ENSMUST00000118099 455 ntBASIC5.49□□□□□ -1.53
Trim28Q62318 Gm14366-201ENSMUST00000121970 730 ntBASIC5.49□□□□□ -1.53
Trim28Q62318 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC5.49□□□□□ -1.53
Trim28Q62318 Gm11254-201ENSMUST00000122368 653 ntBASIC5.49□□□□□ -1.53
Trim28Q62318 Gm23867-201ENSMUST00000122649 274 ntBASIC5.49□□□□□ -1.53
Trim28Q62318 Gm23499-201ENSMUST00000157736 268 ntBASIC5.49□□□□□ -1.53
Trim28Q62318 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC5.49□□□□□ -1.53
Trim28Q62318 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC5.49□□□□□ -1.53
Trim28Q62318 Gm8296-201ENSMUST00000185597 524 ntBASIC5.49□□□□□ -1.53
Trim28Q62318 Gm28628-201ENSMUST00000187006 264 ntBASIC5.49□□□□□ -1.53
Trim28Q62318 Gm29064-201ENSMUST00000187014 813 ntBASIC5.49□□□□□ -1.53
Trim28Q62318 Gm19503-201ENSMUST00000187109 241 ntBASIC5.49□□□□□ -1.53
Trim28Q62318 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Trim28Q62318 Gm8403-201ENSMUST00000189712 1298 ntBASIC5.49□□□□□ -1.53
Trim28Q62318 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Trim28Q62318 Gm18291-201ENSMUST00000190791 301 ntBASIC5.49□□□□□ -1.53
Trim28Q62318 Gm38281-201ENSMUST00000192301 315 ntBASIC5.49□□□□□ -1.53
Trim28Q62318 Gm43308-201ENSMUST00000197236 373 ntBASIC5.49□□□□□ -1.53
Trim28Q62318 Mir129b-201ENSMUST00000197461 65 ntBASIC5.49□□□□□ -1.53
Trim28Q62318 Gm43559-201ENSMUST00000198755 466 ntBASIC5.49□□□□□ -1.53
Trim28Q62318 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC5.49□□□□□ -1.53
Trim28Q62318 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC5.49□□□□□ -1.53
Trim28Q62318 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Trim28Q62318 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC5.49□□□□□ -1.53
Trim28Q62318 AC154374.1-201ENSMUST00000215351 351 ntBASIC5.49□□□□□ -1.53
Trim28Q62318 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Trim28Q62318 Olfr753-ps1-204ENSMUST00000219487 2956 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Trim28Q62318 AC115750.1-201ENSMUST00000220441 567 ntBASIC5.49□□□□□ -1.53
Trim28Q62318 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Trim28Q62318 AC167977.1-201ENSMUST00000221384 234 ntBASIC5.49□□□□□ -1.53
Trim28Q62318 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Trim28Q62318 AC165146.1-201ENSMUST00000223777 900 ntBASIC5.49□□□□□ -1.53
Trim28Q62318 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Trim28Q62318 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC5.49□□□□□ -1.53
Trim28Q62318 Gm5548-201ENSMUST00000055878 397 ntBASIC5.49□□□□□ -1.53
Trim28Q62318 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Trim28Q62318 Olfr197-201ENSMUST00000080031 926 ntBASIC5.49□□□□□ -1.53
Trim28Q62318 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC5.49□□□□□ -1.53
Trim28Q62318 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Trim28Q62318 Gm37393-201ENSMUST00000195118 3870 ntBASIC5.49□□□□□ -1.53
Trim28Q62318 Gm5155-201ENSMUST00000072381 2841 ntBASIC5.49□□□□□ -1.53
Trim28Q62318 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Trim28Q62318 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC5.49□□□□□ -1.53
Trim28Q62318 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Trim28Q62318 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Trim28Q62318 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Trim28Q62318 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Trim28Q62318 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Trim28Q62318 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
Trim28Q62318 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
Trim28Q62318 Gm37192-201ENSMUST00000194479 1348 ntBASIC5.48□□□□□ -1.53
Trim28Q62318 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Trim28Q62318 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Trim28Q62318 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Trim28Q62318 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Trim28Q62318 Gm37250-201ENSMUST00000194919 2388 ntBASIC5.48□□□□□ -1.53
Trim28Q62318 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
Trim28Q62318 Gm13310-201ENSMUST00000120962 1381 ntBASIC5.48□□□□□ -1.53
Trim28Q62318 Gm23133-201ENSMUST00000104255 135 ntBASIC5.48□□□□□ -1.53
Trim28Q62318 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC5.48□□□□□ -1.53
Trim28Q62318 Gm12045-201ENSMUST00000122122 573 ntBASIC5.48□□□□□ -1.53
Trim28Q62318 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC5.48□□□□□ -1.53
Trim28Q62318 Gm22755-201ENSMUST00000157143 100 ntBASIC5.48□□□□□ -1.53
Trim28Q62318 Gm22158-201ENSMUST00000158411 126 ntBASIC5.48□□□□□ -1.53
Trim28Q62318 Gm22120-201ENSMUST00000175590 70 ntBASIC5.48□□□□□ -1.53
Trim28Q62318 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC5.48□□□□□ -1.53
Trim28Q62318 Gm5974-201ENSMUST00000181607 986 ntBASIC5.48□□□□□ -1.53
Trim28Q62318 Gm28596-201ENSMUST00000185870 696 ntBASIC5.48□□□□□ -1.53
Trim28Q62318 Gm4854-201ENSMUST00000185902 574 ntBASIC5.48□□□□□ -1.53
Trim28Q62318 Gm18185-201ENSMUST00000186725 667 ntBASIC5.48□□□□□ -1.53
Trim28Q62318 Gm29460-201ENSMUST00000188607 714 ntBASIC5.48□□□□□ -1.53
Trim28Q62318 Gm32295-201ENSMUST00000192558 696 ntBASIC5.48□□□□□ -1.53
Trim28Q62318 Gm31260-201ENSMUST00000193478 696 ntBASIC5.48□□□□□ -1.53
Trim28Q62318 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC5.48□□□□□ -1.53
Trim28Q62318 Gm5001-201ENSMUST00000204361 331 ntBASIC5.48□□□□□ -1.53
Trim28Q62318 Gm8319-201ENSMUST00000205708 641 ntBASIC5.48□□□□□ -1.53
Trim28Q62318 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC5.48□□□□□ -1.53
Trim28Q62318 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC5.48□□□□□ -1.53
Trim28Q62318 Gm45523-201ENSMUST00000210712 799 ntBASIC5.48□□□□□ -1.53
Trim28Q62318 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC5.48□□□□□ -1.53
Trim28Q62318 Gm8106-201ENSMUST00000213123 523 ntBASIC5.48□□□□□ -1.53
Trim28Q62318 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC5.48□□□□□ -1.53
Trim28Q62318 Gm29809-201ENSMUST00000218423 493 ntBASIC5.48□□□□□ -1.53
Trim28Q62318 Gm35558-202ENSMUST00000221819 499 ntBASIC5.48□□□□□ -1.53
Trim28Q62318 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC5.48□□□□□ -1.53
Trim28Q62318 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC5.48□□□□□ -1.53
Trim28Q62318 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Trim28Q62318 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC5.48□□□□□ -1.53
Trim28Q62318 Gm43024-201ENSMUST00000196770 4352 ntBASIC5.48□□□□□ -1.53
Trim28Q62318 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Trim28Q62318 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC5.48□□□□□ -1.53
Trim28Q62318 Gm43200-201ENSMUST00000200385 2161 ntBASIC5.48□□□□□ -1.53
Trim28Q62318 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC5.47□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms