Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm9239-201ENSMUST00000186942 2557 ntBASIC9.64□□□□□ -0.87
Trim41Q5NCC3 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim41Q5NCC3 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trim41Q5NCC3 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim41Q5NCC3 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim41Q5NCC3 Gm45424-201ENSMUST00000210575 3300 ntBASIC9.63□□□□□ -0.87
Trim41Q5NCC3 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trim41Q5NCC3 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC9.63□□□□□ -0.87
Trim41Q5NCC3 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim41Q5NCC3 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trim41Q5NCC3 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC9.63□□□□□ -0.87
Trim41Q5NCC3 Gm7953-201ENSMUST00000168278 469 ntBASIC9.63□□□□□ -0.87
Trim41Q5NCC3 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC9.63□□□□□ -0.87
Trim41Q5NCC3 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC9.63□□□□□ -0.87
Trim41Q5NCC3 Gm44431-201ENSMUST00000203500 413 ntBASIC9.63□□□□□ -0.87
Trim41Q5NCC3 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC9.63□□□□□ -0.87
Trim41Q5NCC3 Gm7034-201ENSMUST00000218638 645 ntBASIC9.63□□□□□ -0.87
Trim41Q5NCC3 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim41Q5NCC3 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
Trim41Q5NCC3 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC9.63□□□□□ -0.87
Trim41Q5NCC3 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC9.63□□□□□ -0.87
Trim41Q5NCC3 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim41Q5NCC3 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim41Q5NCC3 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim41Q5NCC3 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trim41Q5NCC3 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trim41Q5NCC3 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trim41Q5NCC3 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trim41Q5NCC3 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC9.63□□□□□ -0.87
Trim41Q5NCC3 Dnm3os-201ENSMUST00000139662 7928 ntBASIC9.63□□□□□ -0.87
Trim41Q5NCC3 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trim41Q5NCC3 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Trim41Q5NCC3 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trim41Q5NCC3 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Trim41Q5NCC3 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trim41Q5NCC3 Specc1-201ENSMUST00000049836 6091 ntTSL 5 BASIC9.62□□□□□ -0.87
Trim41Q5NCC3 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC9.62□□□□□ -0.87
Trim41Q5NCC3 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trim41Q5NCC3 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Trim41Q5NCC3 Gm13149-201ENSMUST00000122071 339 ntBASIC9.62□□□□□ -0.87
Trim41Q5NCC3 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC9.62□□□□□ -0.87
Trim41Q5NCC3 Gm27254-201ENSMUST00000183926 517 ntBASIC9.62□□□□□ -0.87
Trim41Q5NCC3 Gm29062-201ENSMUST00000186032 694 ntBASIC9.62□□□□□ -0.87
Trim41Q5NCC3 Gm2914-201ENSMUST00000186120 328 ntBASIC9.62□□□□□ -0.87
Trim41Q5NCC3 Gm28255-201ENSMUST00000187101 694 ntBASIC9.62□□□□□ -0.87
Trim41Q5NCC3 Gm44157-201ENSMUST00000204720 410 ntBASIC9.62□□□□□ -0.87
Trim41Q5NCC3 AC152979.3-201ENSMUST00000217720 479 ntBASIC9.62□□□□□ -0.87
Trim41Q5NCC3 AC144819.1-201ENSMUST00000227015 620 ntBASIC9.62□□□□□ -0.87
Trim41Q5NCC3 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC9.62□□□□□ -0.87
Trim41Q5NCC3 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC9.61□□□□□ -0.87
Trim41Q5NCC3 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trim41Q5NCC3 Gm43180-201ENSMUST00000197541 2886 ntBASIC9.61□□□□□ -0.87
Trim41Q5NCC3 Dnah5-201ENSMUST00000067048 15637 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Trim41Q5NCC3 Snord66-201ENSMUST00000104051 75 ntBASIC9.61□□□□□ -0.87
Trim41Q5NCC3 Gm14163-201ENSMUST00000117342 217 ntBASIC9.61□□□□□ -0.87
Trim41Q5NCC3 Gm15377-201ENSMUST00000119594 246 ntBASIC9.61□□□□□ -0.87
Trim41Q5NCC3 Gm13692-201ENSMUST00000120774 371 ntBASIC9.61□□□□□ -0.87
Trim41Q5NCC3 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC9.61□□□□□ -0.87
Trim41Q5NCC3 Gm26041-201ENSMUST00000158148 108 ntBASIC9.61□□□□□ -0.87
Trim41Q5NCC3 Gm22411-201ENSMUST00000175462 126 ntBASIC9.61□□□□□ -0.87
Trim41Q5NCC3 Gm22002-201ENSMUST00000175622 125 ntBASIC9.61□□□□□ -0.87
Trim41Q5NCC3 Gm9022-202ENSMUST00000183285 483 ntBASIC9.61□□□□□ -0.87
Trim41Q5NCC3 Gm27747-201ENSMUST00000184707 85 ntBASIC9.61□□□□□ -0.87
Trim41Q5NCC3 Gm18384-201ENSMUST00000195974 808 ntBASIC9.61□□□□□ -0.87
Trim41Q5NCC3 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC9.61□□□□□ -0.87
Trim41Q5NCC3 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC9.61□□□□□ -0.87
Trim41Q5NCC3 Gm45215-201ENSMUST00000206407 395 ntBASIC9.61□□□□□ -0.87
Trim41Q5NCC3 Gm18213-201ENSMUST00000207850 178 ntBASIC9.61□□□□□ -0.87
Trim41Q5NCC3 AL450317.1-201ENSMUST00000213941 291 ntBASIC9.61□□□□□ -0.87
Trim41Q5NCC3 Gm9068-201ENSMUST00000217393 455 ntBASIC9.61□□□□□ -0.87
Trim41Q5NCC3 AC074315.1-201ENSMUST00000228801 214 ntBASIC9.61□□□□□ -0.87
Trim41Q5NCC3 n-R5s65-201ENSMUST00000082614 117 ntBASIC9.61□□□□□ -0.87
Trim41Q5NCC3 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trim41Q5NCC3 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC9.61□□□□□ -0.87
Trim41Q5NCC3 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC9.61□□□□□ -0.87
Trim41Q5NCC3 Gm42537-201ENSMUST00000198260 2574 ntBASIC9.61□□□□□ -0.87
Trim41Q5NCC3 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trim41Q5NCC3 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trim41Q5NCC3 Gm43891-201ENSMUST00000205132 3112 ntBASIC9.6□□□□□ -0.87
Trim41Q5NCC3 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trim41Q5NCC3 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trim41Q5NCC3 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC9.6□□□□□ -0.87
Trim41Q5NCC3 Gm11270-201ENSMUST00000117685 471 ntBASIC9.6□□□□□ -0.87
Trim41Q5NCC3 Gm3267-201ENSMUST00000118671 473 ntBASIC9.6□□□□□ -0.87
Trim41Q5NCC3 Gm15803-201ENSMUST00000120118 394 ntBASIC9.6□□□□□ -0.87
Trim41Q5NCC3 Gm11229-201ENSMUST00000121993 437 ntBASIC9.6□□□□□ -0.87
Trim41Q5NCC3 Gm21842-201ENSMUST00000177552 498 ntBASIC9.6□□□□□ -0.87
Trim41Q5NCC3 Gm21626-201ENSMUST00000177791 498 ntBASIC9.6□□□□□ -0.87
Trim41Q5NCC3 Gm21562-201ENSMUST00000177888 498 ntBASIC9.6□□□□□ -0.87
Trim41Q5NCC3 Gm21539-201ENSMUST00000177925 498 ntBASIC9.6□□□□□ -0.87
Trim41Q5NCC3 Gm21599-201ENSMUST00000178249 498 ntBASIC9.6□□□□□ -0.87
Trim41Q5NCC3 Gm21914-201ENSMUST00000178452 498 ntBASIC9.6□□□□□ -0.87
Trim41Q5NCC3 Gm21723-201ENSMUST00000178692 498 ntBASIC9.6□□□□□ -0.87
Trim41Q5NCC3 Gm21916-201ENSMUST00000178771 498 ntBASIC9.6□□□□□ -0.87
Trim41Q5NCC3 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Trim41Q5NCC3 Gm21801-201ENSMUST00000178865 498 ntBASIC9.6□□□□□ -0.87
Trim41Q5NCC3 Gm21633-201ENSMUST00000178941 498 ntBASIC9.6□□□□□ -0.87
Trim41Q5NCC3 Gm21821-201ENSMUST00000179646 498 ntBASIC9.6□□□□□ -0.87
Trim41Q5NCC3 Gm21588-201ENSMUST00000180074 498 ntBASIC9.6□□□□□ -0.87
Trim41Q5NCC3 Gm21780-201ENSMUST00000180128 498 ntBASIC9.6□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms