Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC4.22□□□□□ -1.73
NcanP55066 Gm9931-201ENSMUST00000193584 1185 ntBASIC4.22□□□□□ -1.73
NcanP55066 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC4.22□□□□□ -1.73
NcanP55066 AC122464.1-201ENSMUST00000202789 770 ntBASIC4.22□□□□□ -1.73
NcanP55066 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC4.22□□□□□ -1.73
NcanP55066 Gm45200-201ENSMUST00000207434 919 ntBASIC4.22□□□□□ -1.73
NcanP55066 Gm45162-201ENSMUST00000209013 618 ntBASIC4.22□□□□□ -1.73
NcanP55066 AC099578.1-201ENSMUST00000220147 435 ntBASIC4.22□□□□□ -1.73
NcanP55066 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
NcanP55066 Gm23975-201ENSMUST00000082685 106 ntBASIC4.22□□□□□ -1.73
NcanP55066 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
NcanP55066 Olfr774-201ENSMUST00000097164 939 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
NcanP55066 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
NcanP55066 Gm5117-201ENSMUST00000178878 2553 ntBASIC4.22□□□□□ -1.73
NcanP55066 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
NcanP55066 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NcanP55066 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
NcanP55066 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
NcanP55066 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NcanP55066 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
NcanP55066 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
NcanP55066 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
NcanP55066 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
NcanP55066 Gm9343-201ENSMUST00000209016 2609 ntBASIC4.21□□□□□ -1.74
NcanP55066 Gm8569-201ENSMUST00000117630 647 ntBASIC4.21□□□□□ -1.74
NcanP55066 Gm8757-201ENSMUST00000119660 372 ntBASIC4.21□□□□□ -1.74
NcanP55066 Gm11260-201ENSMUST00000121163 942 ntBASIC4.21□□□□□ -1.74
NcanP55066 Gm11575-201ENSMUST00000122243 228 ntBASIC4.21□□□□□ -1.74
NcanP55066 Gm12591-201ENSMUST00000122407 1177 ntBASIC4.21□□□□□ -1.74
NcanP55066 Gm24960-201ENSMUST00000157923 90 ntBASIC4.21□□□□□ -1.74
NcanP55066 Gm25447-201ENSMUST00000158997 128 ntBASIC4.21□□□□□ -1.74
NcanP55066 Gm17194-201ENSMUST00000164610 348 ntBASIC4.21□□□□□ -1.74
NcanP55066 Gm22693-201ENSMUST00000175049 442 ntBASIC4.21□□□□□ -1.74
NcanP55066 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC4.21□□□□□ -1.74
NcanP55066 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NcanP55066 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC4.21□□□□□ -1.74
NcanP55066 Gm29475-201ENSMUST00000190767 312 ntBASIC4.21□□□□□ -1.74
NcanP55066 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC4.21□□□□□ -1.74
NcanP55066 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC4.21□□□□□ -1.74
NcanP55066 Gm44879-201ENSMUST00000207007 503 ntBASIC4.21□□□□□ -1.74
NcanP55066 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC4.21□□□□□ -1.74
NcanP55066 AC151843.1-201ENSMUST00000215960 691 ntBASIC4.21□□□□□ -1.74
NcanP55066 Gm19233-201ENSMUST00000219772 936 ntBASIC4.21□□□□□ -1.74
NcanP55066 CT571256.1-201ENSMUST00000226045 585 ntBASIC4.21□□□□□ -1.74
NcanP55066 AC131068.1-201ENSMUST00000226891 482 ntBASIC4.21□□□□□ -1.74
NcanP55066 CT030662.2-201ENSMUST00000226942 805 ntBASIC4.21□□□□□ -1.74
NcanP55066 CT025548.1-201ENSMUST00000227459 257 ntBASIC4.21□□□□□ -1.74
NcanP55066 AC165106.3-201ENSMUST00000228191 3843 ntBASIC4.21□□□□□ -1.74
NcanP55066 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
NcanP55066 Gm7381-201ENSMUST00000098958 300 ntBASIC4.21□□□□□ -1.74
NcanP55066 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
NcanP55066 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
NcanP55066 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC4.21□□□□□ -1.74
NcanP55066 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NcanP55066 Gm44288-201ENSMUST00000205061 2795 ntBASIC4.21□□□□□ -1.74
NcanP55066 Olfr753-ps1-204ENSMUST00000219487 2956 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
NcanP55066 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
NcanP55066 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
NcanP55066 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
NcanP55066 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
NcanP55066 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NcanP55066 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NcanP55066 Gm11639-203ENSMUST00000212287 17665 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
NcanP55066 Gm44542-201ENSMUST00000208677 4314 ntBASIC4.2□□□□□ -1.74
NcanP55066 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC4.2□□□□□ -1.74
NcanP55066 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NcanP55066 4930419G24Rik-201ENSMUST00000125494 1058 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NcanP55066 Gm15733-201ENSMUST00000132957 242 ntBASIC4.2□□□□□ -1.74
NcanP55066 Gm23380-201ENSMUST00000158448 103 ntBASIC4.2□□□□□ -1.74
NcanP55066 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
NcanP55066 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
NcanP55066 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC4.2□□□□□ -1.74
NcanP55066 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC4.2□□□□□ -1.74
NcanP55066 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC4.2□□□□□ -1.74
NcanP55066 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
NcanP55066 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC4.2□□□□□ -1.74
NcanP55066 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC4.2□□□□□ -1.74
NcanP55066 Gm3933-201ENSMUST00000195391 439 ntBASIC4.2□□□□□ -1.74
NcanP55066 Gm44376-201ENSMUST00000197570 128 ntBASIC4.2□□□□□ -1.74
NcanP55066 Gm44817-201ENSMUST00000205416 453 ntBASIC4.2□□□□□ -1.74
NcanP55066 Gm44773-201ENSMUST00000207374 557 ntBASIC4.2□□□□□ -1.74
NcanP55066 Gm45189-201ENSMUST00000208567 363 ntBASIC4.2□□□□□ -1.74
NcanP55066 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC4.2□□□□□ -1.74
NcanP55066 Gm18585-201ENSMUST00000215197 556 ntBASIC4.2□□□□□ -1.74
NcanP55066 AC144783.2-201ENSMUST00000219089 195 ntBASIC4.2□□□□□ -1.74
NcanP55066 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC4.2□□□□□ -1.74
NcanP55066 AC159263.3-201ENSMUST00000223434 460 ntBASIC4.2□□□□□ -1.74
NcanP55066 AC167192.4-201ENSMUST00000224087 993 ntBASIC4.2□□□□□ -1.74
NcanP55066 Snora70-201ENSMUST00000083047 137 ntBASIC4.2□□□□□ -1.74
NcanP55066 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
NcanP55066 Gm17752-201ENSMUST00000185787 3726 ntBASIC4.2□□□□□ -1.74
NcanP55066 Gm37006-201ENSMUST00000195253 2674 ntBASIC4.2□□□□□ -1.74
NcanP55066 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
NcanP55066 AC167250.1-201ENSMUST00000213739 3813 ntBASIC4.2□□□□□ -1.74
NcanP55066 Olfr1112-202ENSMUST00000216772 1443 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
NcanP55066 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NcanP55066 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NcanP55066 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
NcanP55066 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
NcanP55066 Gm42852-201ENSMUST00000202649 1379 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms