Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC3.25□□□□□ -1.89
Cdx1P18111 Gm45392-201ENSMUST00000210441 214 ntBASIC3.25□□□□□ -1.89
Cdx1P18111 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC3.25□□□□□ -1.89
Cdx1P18111 AC099578.1-201ENSMUST00000220147 435 ntBASIC3.25□□□□□ -1.89
Cdx1P18111 CR974429.1-201ENSMUST00000220877 827 ntBASIC3.25□□□□□ -1.89
Cdx1P18111 AC126043.1-201ENSMUST00000221304 1141 ntBASIC3.25□□□□□ -1.89
Cdx1P18111 AC127270.2-201ENSMUST00000221337 247 ntBASIC3.25□□□□□ -1.89
Cdx1P18111 AC125379.1-201ENSMUST00000221928 111 ntBASIC3.25□□□□□ -1.89
Cdx1P18111 AC134596.2-201ENSMUST00000222158 171 ntBASIC3.25□□□□□ -1.89
Cdx1P18111 AC115878.1-201ENSMUST00000227247 334 ntBASIC3.25□□□□□ -1.89
Cdx1P18111 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Cdx1P18111 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Cdx1P18111 Gm23846-201ENSMUST00000083835 107 ntBASIC3.25□□□□□ -1.89
Cdx1P18111 n-R5s168-201ENSMUST00000083948 104 ntBASIC3.25□□□□□ -1.89
Cdx1P18111 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Cdx1P18111 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Cdx1P18111 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.25□□□□□ -1.89
Cdx1P18111 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Cdx1P18111 Gm11284-201ENSMUST00000121910 1887 ntBASIC3.24□□□□□ -1.89
Cdx1P18111 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC3.24□□□□□ -1.89
Cdx1P18111 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Cdx1P18111 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC3.24□□□□□ -1.89
Cdx1P18111 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.24□□□□□ -1.89
Cdx1P18111 Gm23697-201ENSMUST00000103897 110 ntBASIC3.24□□□□□ -1.89
Cdx1P18111 Gm26367-201ENSMUST00000104165 132 ntBASIC3.24□□□□□ -1.89
Cdx1P18111 Gm9432-201ENSMUST00000117810 759 ntBASIC3.24□□□□□ -1.89
Cdx1P18111 Gm15377-201ENSMUST00000119594 246 ntBASIC3.24□□□□□ -1.89
Cdx1P18111 Gm14656-201ENSMUST00000120342 502 ntBASIC3.24□□□□□ -1.89
Cdx1P18111 Gm16458-201ENSMUST00000121428 502 ntBASIC3.24□□□□□ -1.89
Cdx1P18111 Gm13131-201ENSMUST00000122228 321 ntBASIC3.24□□□□□ -1.89
Cdx1P18111 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.24□□□□□ -1.89
Cdx1P18111 Ugt2a2-202ENSMUST00000144144 929 ntTSL 2 BASIC3.24□□□□□ -1.89
Cdx1P18111 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC3.24□□□□□ -1.89
Cdx1P18111 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC3.24□□□□□ -1.89
Cdx1P18111 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Cdx1P18111 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC3.24□□□□□ -1.89
Cdx1P18111 Gm5929-201ENSMUST00000166883 487 ntBASIC3.24□□□□□ -1.89
Cdx1P18111 Gm29492-201ENSMUST00000187124 457 ntBASIC3.24□□□□□ -1.89
Cdx1P18111 Gm29524-201ENSMUST00000190819 699 ntBASIC3.24□□□□□ -1.89
Cdx1P18111 Gm43604-201ENSMUST00000199799 705 ntBASIC3.24□□□□□ -1.89
Cdx1P18111 Gm44076-201ENSMUST00000203072 520 ntBASIC3.24□□□□□ -1.89
Cdx1P18111 Gm44054-201ENSMUST00000203814 372 ntBASIC3.24□□□□□ -1.89
Cdx1P18111 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Cdx1P18111 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Cdx1P18111 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC3.24□□□□□ -1.89
Cdx1P18111 AC153526.4-201ENSMUST00000217713 379 ntBASIC3.24□□□□□ -1.89
Cdx1P18111 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC3.24□□□□□ -1.89
Cdx1P18111 Gm9616-201ENSMUST00000221154 781 ntBASIC3.24□□□□□ -1.89
Cdx1P18111 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC3.24□□□□□ -1.89
Cdx1P18111 AC132315.1-201ENSMUST00000221771 390 ntBASIC3.24□□□□□ -1.89
Cdx1P18111 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Cdx1P18111 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Cdx1P18111 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Cdx1P18111 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
Cdx1P18111 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Cdx1P18111 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.24□□□□□ -1.89
Cdx1P18111 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Cdx1P18111 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Cdx1P18111 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Cdx1P18111 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Cdx1P18111 Gm43201-201ENSMUST00000195925 3416 ntBASIC3.23□□□□□ -1.89
Cdx1P18111 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Cdx1P18111 AC134596.1-201ENSMUST00000222016 1922 ntBASIC3.23□□□□□ -1.89
Cdx1P18111 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Cdx1P18111 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC3.23□□□□□ -1.89
Cdx1P18111 Gm14537-201ENSMUST00000117464 599 ntBASIC3.23□□□□□ -1.89
Cdx1P18111 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC3.23□□□□□ -1.89
Cdx1P18111 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC3.23□□□□□ -1.89
Cdx1P18111 Gm6591-201ENSMUST00000121063 434 ntBASIC3.23□□□□□ -1.89
Cdx1P18111 Gm12087-201ENSMUST00000121878 258 ntBASIC3.23□□□□□ -1.89
Cdx1P18111 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC3.23□□□□□ -1.89
Cdx1P18111 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC3.23□□□□□ -1.89
Cdx1P18111 Gm25341-201ENSMUST00000157461 268 ntBASIC3.23□□□□□ -1.89
Cdx1P18111 Gm26000-201ENSMUST00000157991 107 ntBASIC3.23□□□□□ -1.89
Cdx1P18111 Gm23312-201ENSMUST00000158774 102 ntBASIC3.23□□□□□ -1.89
Cdx1P18111 Gm16055-201ENSMUST00000161366 626 ntTSL 2 BASIC3.23□□□□□ -1.89
Cdx1P18111 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC3.23□□□□□ -1.89
Cdx1P18111 Gm13249-201ENSMUST00000177803 345 ntBASIC3.23□□□□□ -1.89
Cdx1P18111 Gm13144-201ENSMUST00000179385 345 ntBASIC3.23□□□□□ -1.89
Cdx1P18111 Gm11394-201ENSMUST00000181421 517 ntBASIC3.23□□□□□ -1.89
Cdx1P18111 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Cdx1P18111 Gm38270-201ENSMUST00000192721 407 ntBASIC3.23□□□□□ -1.89
Cdx1P18111 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC3.23□□□□□ -1.89
Cdx1P18111 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC3.23□□□□□ -1.89
Cdx1P18111 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC3.23□□□□□ -1.89
Cdx1P18111 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Cdx1P18111 Gm17737-201ENSMUST00000210183 1147 ntBASIC3.23□□□□□ -1.89
Cdx1P18111 Gm18320-201ENSMUST00000211304 595 ntBASIC3.23□□□□□ -1.89
Cdx1P18111 Gm6842-201ENSMUST00000211361 390 ntBASIC3.23□□□□□ -1.89
Cdx1P18111 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC3.23□□□□□ -1.89
Cdx1P18111 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Cdx1P18111 AC119241.1-201ENSMUST00000223651 534 ntBASIC3.23□□□□□ -1.89
Cdx1P18111 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Cdx1P18111 AC156790.5-201ENSMUST00000227075 231 ntBASIC3.23□□□□□ -1.89
Cdx1P18111 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Cdx1P18111 Olfr1301-201ENSMUST00000080094 939 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Cdx1P18111 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Cdx1P18111 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Cdx1P18111 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
Cdx1P18111 AC154323.3-201ENSMUST00000226927 1660 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 116.6 ms