Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Pcdh1F7BJK1 Gm15581-201ENSMUST00000131334 5640 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Pcdh1F7BJK1 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC4.69□□□□□ -1.66
Pcdh1F7BJK1 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC4.69□□□□□ -1.66
Pcdh1F7BJK1 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
Pcdh1F7BJK1 Olfr497-202ENSMUST00000213521 2396 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
Pcdh1F7BJK1 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 n-R5s16-201ENSMUST00000104555 119 ntBASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 Gm13085-201ENSMUST00000118356 171 ntBASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 Gm13228-201ENSMUST00000118937 634 ntBASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 Gm4853-201ENSMUST00000119359 394 ntBASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 Gm11862-201ENSMUST00000119678 659 ntBASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 Olfr1191-ps1-201ENSMUST00000120598 4677 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 Gm23318-201ENSMUST00000158000 108 ntBASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 Gm25907-201ENSMUST00000158486 125 ntBASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 Gm5731-201ENSMUST00000190969 481 ntBASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 Gm28408-201ENSMUST00000191557 463 ntBASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 Gm37757-201ENSMUST00000193072 210 ntBASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 Gm38008-201ENSMUST00000195333 518 ntBASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 Gm44161-201ENSMUST00000203532 253 ntBASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 Crs-ps-201ENSMUST00000203723 760 ntBASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 Gm44959-201ENSMUST00000209127 231 ntBASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 Gm2446-201ENSMUST00000220144 772 ntBASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 Gm8785-201ENSMUST00000220259 487 ntBASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 Gm3800-201ENSMUST00000221086 554 ntBASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 AC113031.3-201ENSMUST00000226552 190 ntBASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 AC134420.1-201ENSMUST00000227027 289 ntBASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 Gm16335-201ENSMUST00000077495 309 ntBASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 n-R5s205-201ENSMUST00000083149 125 ntBASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 Gm26743-201ENSMUST00000180913 1726 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 Gm28710-202ENSMUST00000211738 2987 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 Gm37226-201ENSMUST00000191644 3255 ntBASIC4.68□□□□□ -1.66
Pcdh1F7BJK1 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC4.67□□□□□ -1.66
Pcdh1F7BJK1 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
Pcdh1F7BJK1 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Pcdh1F7BJK1 AC160115.1-201ENSMUST00000224678 1574 ntBASIC4.67□□□□□ -1.66
Pcdh1F7BJK1 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
Pcdh1F7BJK1 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC4.67□□□□□ -1.66
Pcdh1F7BJK1 Gm37363-201ENSMUST00000192336 2233 ntBASIC4.67□□□□□ -1.66
Pcdh1F7BJK1 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC4.67□□□□□ -1.66
Pcdh1F7BJK1 Gm26078-201ENSMUST00000104067 128 ntBASIC4.67□□□□□ -1.66
Pcdh1F7BJK1 Gm23744-201ENSMUST00000104231 149 ntBASIC4.67□□□□□ -1.66
Pcdh1F7BJK1 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC4.67□□□□□ -1.66
Pcdh1F7BJK1 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Pcdh1F7BJK1 Gm8424-201ENSMUST00000117716 988 ntBASIC4.67□□□□□ -1.66
Pcdh1F7BJK1 Gm14428-201ENSMUST00000120408 822 ntBASIC4.67□□□□□ -1.66
Pcdh1F7BJK1 Mrpl24-203ENSMUST00000121048 1234 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Pcdh1F7BJK1 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC4.67□□□□□ -1.66
Pcdh1F7BJK1 Gm25294-201ENSMUST00000122791 104 ntBASIC4.67□□□□□ -1.66
Pcdh1F7BJK1 Gm24719-201ENSMUST00000157520 110 ntBASIC4.67□□□□□ -1.66
Pcdh1F7BJK1 Gm22210-201ENSMUST00000158101 144 ntBASIC4.67□□□□□ -1.66
Pcdh1F7BJK1 Gm23579-201ENSMUST00000158528 103 ntBASIC4.67□□□□□ -1.66
Pcdh1F7BJK1 Gm3076-201ENSMUST00000161613 451 ntBASIC4.67□□□□□ -1.66
Pcdh1F7BJK1 Gm18199-201ENSMUST00000173820 835 ntBASIC4.67□□□□□ -1.66
Pcdh1F7BJK1 Mir3066-201ENSMUST00000175296 83 ntBASIC4.67□□□□□ -1.66
Pcdh1F7BJK1 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC4.67□□□□□ -1.66
Pcdh1F7BJK1 Mir7220-201ENSMUST00000183978 60 ntBASIC4.67□□□□□ -1.66
Pcdh1F7BJK1 Rhoay-ps2-201ENSMUST00000186362 581 ntBASIC4.67□□□□□ -1.66
Pcdh1F7BJK1 Gm2325-201ENSMUST00000186637 581 ntBASIC4.67□□□□□ -1.66
Pcdh1F7BJK1 Gm38015-201ENSMUST00000193048 188 ntBASIC4.67□□□□□ -1.66
Pcdh1F7BJK1 Gm5285-201ENSMUST00000193089 666 ntBASIC4.67□□□□□ -1.66
Pcdh1F7BJK1 Gm43456-201ENSMUST00000202519 457 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 90.8 ms