Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Upf1Q9EPU0 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Upf1Q9EPU0 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Upf1Q9EPU0 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Upf1Q9EPU0 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Upf1Q9EPU0 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC5.72□□□□□ -1.49
Upf1Q9EPU0 Gm4541-201ENSMUST00000208901 1848 ntBASIC5.71□□□□□ -1.49
Upf1Q9EPU0 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC5.71□□□□□ -1.49
Upf1Q9EPU0 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
Upf1Q9EPU0 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
Upf1Q9EPU0 Gm21122-201ENSMUST00000191548 3452 ntBASIC5.71□□□□□ -1.49
Upf1Q9EPU0 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC5.71□□□□□ -1.5
Upf1Q9EPU0 Gm45697-201ENSMUST00000212893 2876 ntBASIC5.71□□□□□ -1.5
Upf1Q9EPU0 Olfr1406-203ENSMUST00000215878 3149 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Upf1Q9EPU0 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Upf1Q9EPU0 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Upf1Q9EPU0 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Upf1Q9EPU0 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Upf1Q9EPU0 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Upf1Q9EPU0 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Upf1Q9EPU0 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Upf1Q9EPU0 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Upf1Q9EPU0 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Upf1Q9EPU0 Gm14706-201ENSMUST00000117744 255 ntBASIC5.71□□□□□ -1.5
Upf1Q9EPU0 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC5.71□□□□□ -1.5
Upf1Q9EPU0 Gm14655-201ENSMUST00000120124 578 ntBASIC5.71□□□□□ -1.5
Upf1Q9EPU0 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC5.71□□□□□ -1.5
Upf1Q9EPU0 Gm25784-201ENSMUST00000122524 81 ntBASIC5.71□□□□□ -1.5
Upf1Q9EPU0 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC5.71□□□□□ -1.5
Upf1Q9EPU0 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Upf1Q9EPU0 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC5.71□□□□□ -1.5
Upf1Q9EPU0 Gm9071-201ENSMUST00000165915 474 ntBASIC5.71□□□□□ -1.5
Upf1Q9EPU0 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC5.71□□□□□ -1.5
Upf1Q9EPU0 Gm27037-201ENSMUST00000182270 960 ntBASIC5.71□□□□□ -1.5
Upf1Q9EPU0 Gm27660-201ENSMUST00000184028 208 ntBASIC5.71□□□□□ -1.5
Upf1Q9EPU0 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC5.71□□□□□ -1.5
Upf1Q9EPU0 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Upf1Q9EPU0 Gm29045-201ENSMUST00000187278 698 ntBASIC5.71□□□□□ -1.5
Upf1Q9EPU0 Gm10193-201ENSMUST00000188288 231 ntBASIC5.71□□□□□ -1.5
Upf1Q9EPU0 Gm36984-201ENSMUST00000192770 235 ntBASIC5.71□□□□□ -1.5
Upf1Q9EPU0 Gm17956-201ENSMUST00000199931 838 ntBASIC5.71□□□□□ -1.5
Upf1Q9EPU0 Gm43505-201ENSMUST00000200579 139 ntBASIC5.71□□□□□ -1.5
Upf1Q9EPU0 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC5.71□□□□□ -1.5
Upf1Q9EPU0 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC5.71□□□□□ -1.5
Upf1Q9EPU0 Gm5917-201ENSMUST00000217638 721 ntBASIC5.71□□□□□ -1.5
Upf1Q9EPU0 Gm10264-201ENSMUST00000220589 429 ntBASIC5.71□□□□□ -1.5
Upf1Q9EPU0 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
Upf1Q9EPU0 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Upf1Q9EPU0 Olfr593-201ENSMUST00000098206 984 ntAPPRIS P2 BASIC5.71□□□□□ -1.5
Upf1Q9EPU0 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Upf1Q9EPU0 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Upf1Q9EPU0 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Upf1Q9EPU0 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Upf1Q9EPU0 Olfr919-203ENSMUST00000217508 1843 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Upf1Q9EPU0 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Upf1Q9EPU0 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Upf1Q9EPU0 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Upf1Q9EPU0 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC5.71□□□□□ -1.5
Upf1Q9EPU0 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Upf1Q9EPU0 Gm4759-201ENSMUST00000183414 6622 ntBASIC5.71□□□□□ -1.5
Upf1Q9EPU0 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Upf1Q9EPU0 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
Upf1Q9EPU0 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Upf1Q9EPU0 Gm38104-201ENSMUST00000195121 1895 ntBASIC5.71□□□□□ -1.5
Upf1Q9EPU0 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Upf1Q9EPU0 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Upf1Q9EPU0 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Upf1Q9EPU0 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Upf1Q9EPU0 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Upf1Q9EPU0 AC133076.2-201ENSMUST00000227678 3532 ntBASIC5.7□□□□□ -1.5
Upf1Q9EPU0 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Upf1Q9EPU0 Zfp26-203ENSMUST00000159569 11276 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Upf1Q9EPU0 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Upf1Q9EPU0 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Upf1Q9EPU0 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Upf1Q9EPU0 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Upf1Q9EPU0 Gm43682-201ENSMUST00000202150 2090 ntBASIC5.7□□□□□ -1.5
Upf1Q9EPU0 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Upf1Q9EPU0 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC5.7□□□□□ -1.5
Upf1Q9EPU0 Gm43466-201ENSMUST00000197836 5214 ntBASIC5.7□□□□□ -1.5
Upf1Q9EPU0 Gm22936-201ENSMUST00000103955 126 ntBASIC5.7□□□□□ -1.5
Upf1Q9EPU0 Rps19-ps7-201ENSMUST00000116122 438 ntBASIC5.7□□□□□ -1.5
Upf1Q9EPU0 Gm12322-201ENSMUST00000121605 389 ntBASIC5.7□□□□□ -1.5
Upf1Q9EPU0 Gm13363-201ENSMUST00000122008 522 ntBASIC5.7□□□□□ -1.5
Upf1Q9EPU0 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC5.7□□□□□ -1.5
Upf1Q9EPU0 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC5.7□□□□□ -1.5
Upf1Q9EPU0 Gm17421-201ENSMUST00000167845 674 ntBASIC5.7□□□□□ -1.5
Upf1Q9EPU0 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC5.7□□□□□ -1.5
Upf1Q9EPU0 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC5.7□□□□□ -1.5
Upf1Q9EPU0 Gm26177-201ENSMUST00000178683 107 ntBASIC5.7□□□□□ -1.5
Upf1Q9EPU0 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Upf1Q9EPU0 Gm28785-201ENSMUST00000187478 379 ntBASIC5.7□□□□□ -1.5
Upf1Q9EPU0 Gm29335-201ENSMUST00000188361 459 ntBASIC5.7□□□□□ -1.5
Upf1Q9EPU0 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Upf1Q9EPU0 Gm38011-201ENSMUST00000193312 279 ntBASIC5.7□□□□□ -1.5
Upf1Q9EPU0 Gm5552-201ENSMUST00000197149 515 ntBASIC5.7□□□□□ -1.5
Upf1Q9EPU0 Gm19418-201ENSMUST00000197436 580 ntBASIC5.7□□□□□ -1.5
Upf1Q9EPU0 Gm43954-201ENSMUST00000204634 544 ntBASIC5.7□□□□□ -1.5
Upf1Q9EPU0 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC5.7□□□□□ -1.5
Upf1Q9EPU0 Gm8423-201ENSMUST00000211387 607 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms