Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
Clp1Q99LI9 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Clp1Q99LI9 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Clp1Q99LI9 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Clp1Q99LI9 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC5.77□□□□□ -1.49
Clp1Q99LI9 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC5.77□□□□□ -1.49
Clp1Q99LI9 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC5.77□□□□□ -1.49
Clp1Q99LI9 AC113059.3-201ENSMUST00000217423 2777 ntBASIC5.77□□□□□ -1.49
Clp1Q99LI9 Gm38128-201ENSMUST00000192085 3250 ntBASIC5.77□□□□□ -1.49
Clp1Q99LI9 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Clp1Q99LI9 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Clp1Q99LI9 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC5.76□□□□□ -1.49
Clp1Q99LI9 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Clp1Q99LI9 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC5.76□□□□□ -1.49
Clp1Q99LI9 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Clp1Q99LI9 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Clp1Q99LI9 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Clp1Q99LI9 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Clp1Q99LI9 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
Clp1Q99LI9 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Clp1Q99LI9 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC5.76□□□□□ -1.49
Clp1Q99LI9 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Clp1Q99LI9 Gm24889-201ENSMUST00000104388 132 ntBASIC5.76□□□□□ -1.49
Clp1Q99LI9 Mir669g-201ENSMUST00000116809 123 ntBASIC5.76□□□□□ -1.49
Clp1Q99LI9 Gm11346-201ENSMUST00000118346 704 ntBASIC5.76□□□□□ -1.49
Clp1Q99LI9 Gm11813-201ENSMUST00000118586 291 ntBASIC5.76□□□□□ -1.49
Clp1Q99LI9 Gm11227-201ENSMUST00000119774 471 ntBASIC5.76□□□□□ -1.49
Clp1Q99LI9 Gm11556-201ENSMUST00000120751 288 ntBASIC5.76□□□□□ -1.49
Clp1Q99LI9 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC5.76□□□□□ -1.49
Clp1Q99LI9 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC5.76□□□□□ -1.49
Clp1Q99LI9 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC5.76□□□□□ -1.49
Clp1Q99LI9 Gm24857-201ENSMUST00000158061 310 ntBASIC5.76□□□□□ -1.49
Clp1Q99LI9 Gm22725-201ENSMUST00000158092 110 ntBASIC5.76□□□□□ -1.49
Clp1Q99LI9 Gm26170-201ENSMUST00000158419 148 ntBASIC5.76□□□□□ -1.49
Clp1Q99LI9 Gm7925-201ENSMUST00000166690 401 ntBASIC5.76□□□□□ -1.49
Clp1Q99LI9 Gm17183-201ENSMUST00000171170 493 ntBASIC5.76□□□□□ -1.49
Clp1Q99LI9 Gm22569-201ENSMUST00000175545 124 ntBASIC5.76□□□□□ -1.49
Clp1Q99LI9 Gm25671-201ENSMUST00000178612 105 ntBASIC5.76□□□□□ -1.49
Clp1Q99LI9 Gm23307-201ENSMUST00000179167 105 ntBASIC5.76□□□□□ -1.49
Clp1Q99LI9 Gm25286-201ENSMUST00000179790 105 ntBASIC5.76□□□□□ -1.49
Clp1Q99LI9 Gm24968-201ENSMUST00000179817 107 ntBASIC5.76□□□□□ -1.49
Clp1Q99LI9 Mir6943-201ENSMUST00000185186 66 ntBASIC5.76□□□□□ -1.49
Clp1Q99LI9 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC5.76□□□□□ -1.49
Clp1Q99LI9 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC5.76□□□□□ -1.49
Clp1Q99LI9 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC5.76□□□□□ -1.49
Clp1Q99LI9 Gm20203-201ENSMUST00000192352 332 ntBASIC5.76□□□□□ -1.49
Clp1Q99LI9 Gm42663-201ENSMUST00000199883 351 ntBASIC5.76□□□□□ -1.49
Clp1Q99LI9 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Clp1Q99LI9 Gm2607-201ENSMUST00000212389 627 ntBASIC5.76□□□□□ -1.49
Clp1Q99LI9 AC183268.2-201ENSMUST00000214513 446 ntBASIC5.76□□□□□ -1.49
Clp1Q99LI9 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC5.76□□□□□ -1.49
Clp1Q99LI9 AC154335.2-201ENSMUST00000225916 638 ntBASIC5.76□□□□□ -1.49
Clp1Q99LI9 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Clp1Q99LI9 Gm23972-201ENSMUST00000083322 165 ntBASIC5.76□□□□□ -1.49
Clp1Q99LI9 Gm25579-201ENSMUST00000083407 106 ntBASIC5.76□□□□□ -1.49
Clp1Q99LI9 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Clp1Q99LI9 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Clp1Q99LI9 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Clp1Q99LI9 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC5.76□□□□□ -1.49
Clp1Q99LI9 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Clp1Q99LI9 Gm43834-201ENSMUST00000197097 4830 ntBASIC5.76□□□□□ -1.49
Clp1Q99LI9 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC5.76□□□□□ -1.49
Clp1Q99LI9 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Clp1Q99LI9 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Clp1Q99LI9 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Clp1Q99LI9 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Clp1Q99LI9 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Clp1Q99LI9 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
Clp1Q99LI9 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Clp1Q99LI9 Gp6-202ENSMUST00000206928 5900 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Clp1Q99LI9 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
Clp1Q99LI9 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Clp1Q99LI9 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Clp1Q99LI9 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC5.75□□□□□ -1.49
Clp1Q99LI9 AL591843.1-201ENSMUST00000223686 3082 ntBASIC5.75□□□□□ -1.49
Clp1Q99LI9 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Clp1Q99LI9 Gm42992-201ENSMUST00000197043 6836 ntBASIC5.75□□□□□ -1.49
Clp1Q99LI9 Mir592-201ENSMUST00000102113 96 ntBASIC5.75□□□□□ -1.49
Clp1Q99LI9 Gm13085-201ENSMUST00000118356 171 ntBASIC5.75□□□□□ -1.49
Clp1Q99LI9 Gm13228-201ENSMUST00000118937 634 ntBASIC5.75□□□□□ -1.49
Clp1Q99LI9 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC5.75□□□□□ -1.49
Clp1Q99LI9 Gm14765-201ENSMUST00000121954 326 ntBASIC5.75□□□□□ -1.49
Clp1Q99LI9 Gm22940-201ENSMUST00000158560 155 ntBASIC5.75□□□□□ -1.49
Clp1Q99LI9 Gm22633-201ENSMUST00000179834 107 ntBASIC5.75□□□□□ -1.49
Clp1Q99LI9 Gm8816-201ENSMUST00000182280 1163 ntBASIC5.75□□□□□ -1.49
Clp1Q99LI9 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC5.75□□□□□ -1.49
Clp1Q99LI9 Gm27551-201ENSMUST00000184258 77 ntBASIC5.75□□□□□ -1.49
Clp1Q99LI9 Mir6926-201ENSMUST00000184562 68 ntBASIC5.75□□□□□ -1.49
Clp1Q99LI9 Gm38167-201ENSMUST00000195704 1178 ntBASIC5.75□□□□□ -1.49
Clp1Q99LI9 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC5.75□□□□□ -1.49
Clp1Q99LI9 AC153553.1-201ENSMUST00000218257 684 ntBASIC5.75□□□□□ -1.49
Clp1Q99LI9 Gm7540-201ENSMUST00000219764 926 ntBASIC5.75□□□□□ -1.49
Clp1Q99LI9 AC124420.1-201ENSMUST00000219779 791 ntBASIC5.75□□□□□ -1.49
Clp1Q99LI9 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC5.75□□□□□ -1.49
Clp1Q99LI9 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Clp1Q99LI9 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Clp1Q99LI9 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Clp1Q99LI9 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Clp1Q99LI9 Snord42a-201ENSMUST00000082606 65 ntBASIC5.75□□□□□ -1.49
Clp1Q99LI9 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms