Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
Clp1Q99LI9 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Clp1Q99LI9 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Clp1Q99LI9 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Clp1Q99LI9 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC5.77□□□□□ -1.49
Clp1Q99LI9 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC5.77□□□□□ -1.49
Clp1Q99LI9 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC5.77□□□□□ -1.49
Clp1Q99LI9 AC113059.3-201ENSMUST00000217423 2777 ntBASIC5.77□□□□□ -1.49
Clp1Q99LI9 Gm38128-201ENSMUST00000192085 3250 ntBASIC5.77□□□□□ -1.49
Clp1Q99LI9 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Clp1Q99LI9 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Clp1Q99LI9 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC5.76□□□□□ -1.49
Clp1Q99LI9 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Clp1Q99LI9 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC5.76□□□□□ -1.49
Clp1Q99LI9 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Clp1Q99LI9 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Clp1Q99LI9 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Clp1Q99LI9 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Clp1Q99LI9 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
Clp1Q99LI9 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Clp1Q99LI9 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC5.76□□□□□ -1.49
Clp1Q99LI9 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Clp1Q99LI9 Gm24889-201ENSMUST00000104388 132 ntBASIC5.76□□□□□ -1.49
Clp1Q99LI9 Mir669g-201ENSMUST00000116809 123 ntBASIC5.76□□□□□ -1.49
Clp1Q99LI9 Gm11346-201ENSMUST00000118346 704 ntBASIC5.76□□□□□ -1.49
Clp1Q99LI9 Gm11813-201ENSMUST00000118586 291 ntBASIC5.76□□□□□ -1.49
Clp1Q99LI9 Gm11227-201ENSMUST00000119774 471 ntBASIC5.76□□□□□ -1.49
Clp1Q99LI9 Gm11556-201ENSMUST00000120751 288 ntBASIC5.76□□□□□ -1.49
Clp1Q99LI9 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC5.76□□□□□ -1.49
Clp1Q99LI9 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC5.76□□□□□ -1.49
Clp1Q99LI9 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC5.76□□□□□ -1.49
Clp1Q99LI9 Gm24857-201ENSMUST00000158061 310 ntBASIC5.76□□□□□ -1.49
Clp1Q99LI9 Gm22725-201ENSMUST00000158092 110 ntBASIC5.76□□□□□ -1.49
Clp1Q99LI9 Gm26170-201ENSMUST00000158419 148 ntBASIC5.76□□□□□ -1.49
Clp1Q99LI9 Gm7925-201ENSMUST00000166690 401 ntBASIC5.76□□□□□ -1.49
Clp1Q99LI9 Gm17183-201ENSMUST00000171170 493 ntBASIC5.76□□□□□ -1.49
Clp1Q99LI9 Gm22569-201ENSMUST00000175545 124 ntBASIC5.76□□□□□ -1.49
Clp1Q99LI9 Gm25671-201ENSMUST00000178612 105 ntBASIC5.76□□□□□ -1.49
Clp1Q99LI9 Gm23307-201ENSMUST00000179167 105 ntBASIC5.76□□□□□ -1.49
Clp1Q99LI9 Gm25286-201ENSMUST00000179790 105 ntBASIC5.76□□□□□ -1.49
Clp1Q99LI9 Gm24968-201ENSMUST00000179817 107 ntBASIC5.76□□□□□ -1.49
Clp1Q99LI9 Mir6943-201ENSMUST00000185186 66 ntBASIC5.76□□□□□ -1.49
Clp1Q99LI9 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC5.76□□□□□ -1.49
Clp1Q99LI9 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC5.76□□□□□ -1.49
Clp1Q99LI9 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC5.76□□□□□ -1.49
Clp1Q99LI9 Gm20203-201ENSMUST00000192352 332 ntBASIC5.76□□□□□ -1.49
Clp1Q99LI9 Gm42663-201ENSMUST00000199883 351 ntBASIC5.76□□□□□ -1.49
Clp1Q99LI9 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Clp1Q99LI9 Gm2607-201ENSMUST00000212389 627 ntBASIC5.76□□□□□ -1.49
Clp1Q99LI9 AC183268.2-201ENSMUST00000214513 446 ntBASIC5.76□□□□□ -1.49
Clp1Q99LI9 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC5.76□□□□□ -1.49
Clp1Q99LI9 AC154335.2-201ENSMUST00000225916 638 ntBASIC5.76□□□□□ -1.49
Clp1Q99LI9 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Clp1Q99LI9 Gm23972-201ENSMUST00000083322 165 ntBASIC5.76□□□□□ -1.49
Clp1Q99LI9 Gm25579-201ENSMUST00000083407 106 ntBASIC5.76□□□□□ -1.49
Clp1Q99LI9 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Clp1Q99LI9 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Clp1Q99LI9 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Clp1Q99LI9 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC5.76□□□□□ -1.49
Clp1Q99LI9 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Clp1Q99LI9 Gm43834-201ENSMUST00000197097 4830 ntBASIC5.76□□□□□ -1.49
Clp1Q99LI9 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC5.76□□□□□ -1.49
Clp1Q99LI9 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Clp1Q99LI9 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Clp1Q99LI9 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Clp1Q99LI9 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Clp1Q99LI9 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Clp1Q99LI9 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
Clp1Q99LI9 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Clp1Q99LI9 Gp6-202ENSMUST00000206928 5900 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Clp1Q99LI9 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
Clp1Q99LI9 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Clp1Q99LI9 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Clp1Q99LI9 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC5.75□□□□□ -1.49
Clp1Q99LI9 AL591843.1-201ENSMUST00000223686 3082 ntBASIC5.75□□□□□ -1.49
Clp1Q99LI9 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Clp1Q99LI9 Gm42992-201ENSMUST00000197043 6836 ntBASIC5.75□□□□□ -1.49
Clp1Q99LI9 Mir592-201ENSMUST00000102113 96 ntBASIC5.75□□□□□ -1.49
Clp1Q99LI9 Gm13085-201ENSMUST00000118356 171 ntBASIC5.75□□□□□ -1.49
Clp1Q99LI9 Gm13228-201ENSMUST00000118937 634 ntBASIC5.75□□□□□ -1.49
Clp1Q99LI9 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC5.75□□□□□ -1.49
Clp1Q99LI9 Gm14765-201ENSMUST00000121954 326 ntBASIC5.75□□□□□ -1.49
Clp1Q99LI9 Gm22940-201ENSMUST00000158560 155 ntBASIC5.75□□□□□ -1.49
Clp1Q99LI9 Gm22633-201ENSMUST00000179834 107 ntBASIC5.75□□□□□ -1.49
Clp1Q99LI9 Gm8816-201ENSMUST00000182280 1163 ntBASIC5.75□□□□□ -1.49
Clp1Q99LI9 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC5.75□□□□□ -1.49
Clp1Q99LI9 Gm27551-201ENSMUST00000184258 77 ntBASIC5.75□□□□□ -1.49
Clp1Q99LI9 Mir6926-201ENSMUST00000184562 68 ntBASIC5.75□□□□□ -1.49
Clp1Q99LI9 Gm38167-201ENSMUST00000195704 1178 ntBASIC5.75□□□□□ -1.49
Clp1Q99LI9 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC5.75□□□□□ -1.49
Clp1Q99LI9 AC153553.1-201ENSMUST00000218257 684 ntBASIC5.75□□□□□ -1.49
Clp1Q99LI9 Gm7540-201ENSMUST00000219764 926 ntBASIC5.75□□□□□ -1.49
Clp1Q99LI9 AC124420.1-201ENSMUST00000219779 791 ntBASIC5.75□□□□□ -1.49
Clp1Q99LI9 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC5.75□□□□□ -1.49
Clp1Q99LI9 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Clp1Q99LI9 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Clp1Q99LI9 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Clp1Q99LI9 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Clp1Q99LI9 Snord42a-201ENSMUST00000082606 65 ntBASIC5.75□□□□□ -1.49
Clp1Q99LI9 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 107.7 ms