Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Mir6344-201ENSMUST00000183462 104 ntBASIC5.09□□□□□ -1.59
Ccdc9Q8VC31 Gm28061-201ENSMUST00000189085 807 ntBASIC5.09□□□□□ -1.59
Ccdc9Q8VC31 4930548G14Rik-202ENSMUST00000190364 1185 ntTSL 2 BASIC5.09□□□□□ -1.59
Ccdc9Q8VC31 Gm38261-201ENSMUST00000192608 316 ntBASIC5.09□□□□□ -1.59
Ccdc9Q8VC31 Gm37404-201ENSMUST00000195726 359 ntBASIC5.09□□□□□ -1.59
Ccdc9Q8VC31 Gm43238-201ENSMUST00000196463 359 ntBASIC5.09□□□□□ -1.59
Ccdc9Q8VC31 Gm42982-201ENSMUST00000198574 687 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Ccdc9Q8VC31 Gm3816-201ENSMUST00000209803 433 ntBASIC5.09□□□□□ -1.59
Ccdc9Q8VC31 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Ccdc9Q8VC31 Gm5917-201ENSMUST00000217638 721 ntBASIC5.09□□□□□ -1.59
Ccdc9Q8VC31 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Ccdc9Q8VC31 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Ccdc9Q8VC31 AC164567.4-201ENSMUST00000219708 483 ntBASIC5.09□□□□□ -1.59
Ccdc9Q8VC31 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC5.09□□□□□ -1.59
Ccdc9Q8VC31 AC154657.1-201ENSMUST00000226394 775 ntBASIC5.09□□□□□ -1.59
Ccdc9Q8VC31 CT572983.1-201ENSMUST00000226895 514 ntBASIC5.09□□□□□ -1.59
Ccdc9Q8VC31 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Ccdc9Q8VC31 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Ccdc9Q8VC31 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Ccdc9Q8VC31 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Ccdc9Q8VC31 Olfr1206-201ENSMUST00000077302 924 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Ccdc9Q8VC31 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Ccdc9Q8VC31 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
Ccdc9Q8VC31 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Ccdc9Q8VC31 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Ccdc9Q8VC31 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
Ccdc9Q8VC31 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Ccdc9Q8VC31 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC5.08□□□□□ -1.6
Ccdc9Q8VC31 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC5.08□□□□□ -1.6
Ccdc9Q8VC31 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
Ccdc9Q8VC31 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
Ccdc9Q8VC31 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Ccdc9Q8VC31 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC5.08□□□□□ -1.6
Ccdc9Q8VC31 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC5.08□□□□□ -1.6
Ccdc9Q8VC31 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC5.08□□□□□ -1.6
Ccdc9Q8VC31 Gm14989-201ENSMUST00000120497 207 ntBASIC5.08□□□□□ -1.6
Ccdc9Q8VC31 Gm13339-201ENSMUST00000120651 510 ntBASIC5.08□□□□□ -1.6
Ccdc9Q8VC31 Gm16254-201ENSMUST00000131528 730 ntBASIC5.08□□□□□ -1.6
Ccdc9Q8VC31 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Ccdc9Q8VC31 Gm23467-201ENSMUST00000157127 159 ntBASIC5.08□□□□□ -1.6
Ccdc9Q8VC31 Gm24393-201ENSMUST00000158135 97 ntBASIC5.08□□□□□ -1.6
Ccdc9Q8VC31 Gm24724-201ENSMUST00000158230 107 ntBASIC5.08□□□□□ -1.6
Ccdc9Q8VC31 Gm25520-201ENSMUST00000158389 118 ntBASIC5.08□□□□□ -1.6
Ccdc9Q8VC31 Gm23022-201ENSMUST00000158768 180 ntBASIC5.08□□□□□ -1.6
Ccdc9Q8VC31 Gm16490-201ENSMUST00000165299 351 ntBASIC5.08□□□□□ -1.6
Ccdc9Q8VC31 Gm25534-201ENSMUST00000175365 125 ntBASIC5.08□□□□□ -1.6
Ccdc9Q8VC31 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC5.08□□□□□ -1.6
Ccdc9Q8VC31 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC5.08□□□□□ -1.6
Ccdc9Q8VC31 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC5.08□□□□□ -1.6
Ccdc9Q8VC31 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC5.08□□□□□ -1.6
Ccdc9Q8VC31 Gm26933-201ENSMUST00000182320 827 ntBASIC5.08□□□□□ -1.6
Ccdc9Q8VC31 Gm29073-201ENSMUST00000185563 664 ntBASIC5.08□□□□□ -1.6
Ccdc9Q8VC31 Gm28661-201ENSMUST00000188231 681 ntBASIC5.08□□□□□ -1.6
Ccdc9Q8VC31 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Ccdc9Q8VC31 Gm29165-201ENSMUST00000190655 664 ntBASIC5.08□□□□□ -1.6
Ccdc9Q8VC31 Gm29211-201ENSMUST00000191470 664 ntBASIC5.08□□□□□ -1.6
Ccdc9Q8VC31 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Ccdc9Q8VC31 Serpinb10-203ENSMUST00000194951 1194 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Ccdc9Q8VC31 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC5.08□□□□□ -1.6
Ccdc9Q8VC31 Igkv2-107-201ENSMUST00000196000 313 ntBASIC5.08□□□□□ -1.6
Ccdc9Q8VC31 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC5.08□□□□□ -1.6
Ccdc9Q8VC31 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Ccdc9Q8VC31 Amd-ps5-201ENSMUST00000198406 989 ntBASIC5.08□□□□□ -1.6
Ccdc9Q8VC31 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC5.08□□□□□ -1.6
Ccdc9Q8VC31 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC5.08□□□□□ -1.6
Ccdc9Q8VC31 AC166358.6-201ENSMUST00000221834 1206 ntBASIC5.08□□□□□ -1.6
Ccdc9Q8VC31 Gm6988-201ENSMUST00000222676 375 ntBASIC5.08□□□□□ -1.6
Ccdc9Q8VC31 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Ccdc9Q8VC31 AC125539.2-201ENSMUST00000228339 753 ntBASIC5.08□□□□□ -1.6
Ccdc9Q8VC31 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Ccdc9Q8VC31 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Ccdc9Q8VC31 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Ccdc9Q8VC31 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Ccdc9Q8VC31 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Ccdc9Q8VC31 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Ccdc9Q8VC31 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ccdc9Q8VC31 Serpinb7-201ENSMUST00000086690 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ccdc9Q8VC31 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ccdc9Q8VC31 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ccdc9Q8VC31 Cd53-201ENSMUST00000038845 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ccdc9Q8VC31 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Ccdc9Q8VC31 Gm14995-201ENSMUST00000117135 391 ntBASIC5.07□□□□□ -1.6
Ccdc9Q8VC31 Gm15916-201ENSMUST00000118355 736 ntBASIC5.07□□□□□ -1.6
Ccdc9Q8VC31 Gm12994-201ENSMUST00000119601 447 ntBASIC5.07□□□□□ -1.6
Ccdc9Q8VC31 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC5.07□□□□□ -1.6
Ccdc9Q8VC31 Gm24840-201ENSMUST00000122603 147 ntBASIC5.07□□□□□ -1.6
Ccdc9Q8VC31 Gm16359-201ENSMUST00000124511 289 ntBASIC5.07□□□□□ -1.6
Ccdc9Q8VC31 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC5.07□□□□□ -1.6
Ccdc9Q8VC31 Gm3053-201ENSMUST00000161709 616 ntBASIC5.07□□□□□ -1.6
Ccdc9Q8VC31 Gm23186-201ENSMUST00000180078 107 ntBASIC5.07□□□□□ -1.6
Ccdc9Q8VC31 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC5.07□□□□□ -1.6
Ccdc9Q8VC31 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC5.07□□□□□ -1.6
Ccdc9Q8VC31 Gm18181-201ENSMUST00000190670 736 ntBASIC5.07□□□□□ -1.6
Ccdc9Q8VC31 Gm37771-201ENSMUST00000193121 265 ntBASIC5.07□□□□□ -1.6
Ccdc9Q8VC31 Gm8891-201ENSMUST00000198546 832 ntBASIC5.07□□□□□ -1.6
Ccdc9Q8VC31 Gm43578-201ENSMUST00000201250 459 ntBASIC5.07□□□□□ -1.6
Ccdc9Q8VC31 Gm43975-201ENSMUST00000203023 481 ntBASIC5.07□□□□□ -1.6
Ccdc9Q8VC31 Gm18127-201ENSMUST00000208479 725 ntBASIC5.07□□□□□ -1.6
Ccdc9Q8VC31 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC5.07□□□□□ -1.6
Ccdc9Q8VC31 AC091783.4-201ENSMUST00000224940 611 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms