Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Ushbp1Q8R370 Gm32061-201ENSMUST00000207232 3478 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Ushbp1Q8R370 AC160130.1-201ENSMUST00000220734 2735 ntBASIC5.18□□□□□ -1.58
Ushbp1Q8R370 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ushbp1Q8R370 Olfr1377-203ENSMUST00000216101 1990 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
Ushbp1Q8R370 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ushbp1Q8R370 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Ushbp1Q8R370 Gm38278-201ENSMUST00000194715 1365 ntBASIC5.18□□□□□ -1.58
Ushbp1Q8R370 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC5.18□□□□□ -1.58
Ushbp1Q8R370 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ushbp1Q8R370 Gm42483-201ENSMUST00000197556 1742 ntBASIC5.18□□□□□ -1.58
Ushbp1Q8R370 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
Ushbp1Q8R370 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ushbp1Q8R370 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Ushbp1Q8R370 Gm26002-201ENSMUST00000101915 107 ntBASIC5.18□□□□□ -1.58
Ushbp1Q8R370 Gm25726-201ENSMUST00000104529 129 ntBASIC5.18□□□□□ -1.58
Ushbp1Q8R370 Gm14784-201ENSMUST00000121604 663 ntBASIC5.18□□□□□ -1.58
Ushbp1Q8R370 Gm25106-201ENSMUST00000122672 134 ntBASIC5.18□□□□□ -1.58
Ushbp1Q8R370 Gm25806-201ENSMUST00000122782 122 ntBASIC5.18□□□□□ -1.58
Ushbp1Q8R370 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC5.18□□□□□ -1.58
Ushbp1Q8R370 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ushbp1Q8R370 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ushbp1Q8R370 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC5.18□□□□□ -1.58
Ushbp1Q8R370 Gm35667-201ENSMUST00000199122 711 ntTSL 5 BASIC5.18□□□□□ -1.58
Ushbp1Q8R370 Gm42579-201ENSMUST00000200512 734 ntBASIC5.18□□□□□ -1.58
Ushbp1Q8R370 Gm44523-201ENSMUST00000205616 417 ntBASIC5.18□□□□□ -1.58
Ushbp1Q8R370 AC161456.1-201ENSMUST00000206771 887 ntBASIC5.18□□□□□ -1.58
Ushbp1Q8R370 Gm44852-201ENSMUST00000207950 369 ntBASIC5.18□□□□□ -1.58
Ushbp1Q8R370 AC153852.1-201ENSMUST00000217881 567 ntBASIC5.18□□□□□ -1.58
Ushbp1Q8R370 AC154788.1-201ENSMUST00000225003 340 ntBASIC5.18□□□□□ -1.58
Ushbp1Q8R370 AC168881.1-201ENSMUST00000226018 430 ntBASIC5.18□□□□□ -1.58
Ushbp1Q8R370 AC137961.1-201ENSMUST00000227924 734 ntBASIC5.18□□□□□ -1.58
Ushbp1Q8R370 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Ushbp1Q8R370 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Ushbp1Q8R370 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Ushbp1Q8R370 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Ushbp1Q8R370 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Ushbp1Q8R370 Snord22-201ENSMUST00000083153 126 ntBASIC5.18□□□□□ -1.58
Ushbp1Q8R370 Gm25821-201ENSMUST00000093657 133 ntBASIC5.18□□□□□ -1.58
Ushbp1Q8R370 Gm37652-201ENSMUST00000195290 2095 ntBASIC5.18□□□□□ -1.58
Ushbp1Q8R370 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ushbp1Q8R370 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Ushbp1Q8R370 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Ushbp1Q8R370 Gm6215-201ENSMUST00000119297 1386 ntBASIC5.17□□□□□ -1.58
Ushbp1Q8R370 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Ushbp1Q8R370 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC5.17□□□□□ -1.58
Ushbp1Q8R370 Gm7988-201ENSMUST00000196623 2297 ntBASIC5.17□□□□□ -1.58
Ushbp1Q8R370 Gm21037-201ENSMUST00000209086 2608 ntBASIC5.17□□□□□ -1.58
Ushbp1Q8R370 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Ushbp1Q8R370 B930086L07Rik-201ENSMUST00000209529 3738 ntBASIC5.17□□□□□ -1.58
Ushbp1Q8R370 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Ushbp1Q8R370 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Ushbp1Q8R370 Gm24124-201ENSMUST00000104103 132 ntBASIC5.17□□□□□ -1.58
Ushbp1Q8R370 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Ushbp1Q8R370 Gm13728-201ENSMUST00000117471 400 ntBASIC5.17□□□□□ -1.58
Ushbp1Q8R370 Gm12433-201ENSMUST00000119659 255 ntBASIC5.17□□□□□ -1.58
Ushbp1Q8R370 Gm7363-201ENSMUST00000119883 399 ntBASIC5.17□□□□□ -1.58
Ushbp1Q8R370 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Ushbp1Q8R370 Gm16445-201ENSMUST00000120399 714 ntBASIC5.17□□□□□ -1.58
Ushbp1Q8R370 Gm13574-201ENSMUST00000120482 394 ntBASIC5.17□□□□□ -1.58
Ushbp1Q8R370 Gm5646-201ENSMUST00000120568 714 ntBASIC5.17□□□□□ -1.58
Ushbp1Q8R370 Gm24774-201ENSMUST00000157384 134 ntBASIC5.17□□□□□ -1.58
Ushbp1Q8R370 Gm23032-201ENSMUST00000157995 107 ntBASIC5.17□□□□□ -1.58
Ushbp1Q8R370 Gm16588-201ENSMUST00000162889 355 ntBASIC5.17□□□□□ -1.58
Ushbp1Q8R370 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC5.17□□□□□ -1.58
Ushbp1Q8R370 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Ushbp1Q8R370 Gm21070-201ENSMUST00000182425 985 ntBASIC5.17□□□□□ -1.58
Ushbp1Q8R370 Mir7022-201ENSMUST00000183749 61 ntBASIC5.17□□□□□ -1.58
Ushbp1Q8R370 Trbv22-201ENSMUST00000191697 291 ntBASIC5.17□□□□□ -1.58
Ushbp1Q8R370 Gm37095-201ENSMUST00000195421 205 ntBASIC5.17□□□□□ -1.58
Ushbp1Q8R370 Gm18452-201ENSMUST00000202968 1111 ntBASIC5.17□□□□□ -1.58
Ushbp1Q8R370 Gm45367-201ENSMUST00000210171 347 ntBASIC5.17□□□□□ -1.58
Ushbp1Q8R370 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Ushbp1Q8R370 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC5.17□□□□□ -1.58
Ushbp1Q8R370 Olfr1291-ps1-202ENSMUST00000219064 897 ntBASIC5.17□□□□□ -1.58
Ushbp1Q8R370 AC157017.1-201ENSMUST00000220148 364 ntBASIC5.17□□□□□ -1.58
Ushbp1Q8R370 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC5.17□□□□□ -1.58
Ushbp1Q8R370 AC122393.1-201ENSMUST00000226570 319 ntBASIC5.17□□□□□ -1.58
Ushbp1Q8R370 Olfr603-201ENSMUST00000071844 939 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Ushbp1Q8R370 Gm24928-201ENSMUST00000083399 107 ntBASIC5.17□□□□□ -1.58
Ushbp1Q8R370 Mir99a-201ENSMUST00000083596 65 ntBASIC5.17□□□□□ -1.58
Ushbp1Q8R370 Gm25897-201ENSMUST00000083709 107 ntBASIC5.17□□□□□ -1.58
Ushbp1Q8R370 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Ushbp1Q8R370 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Ushbp1Q8R370 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC5.17□□□□□ -1.58
Ushbp1Q8R370 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Ushbp1Q8R370 AC152981.1-201ENSMUST00000218320 2480 ntBASIC5.17□□□□□ -1.58
Ushbp1Q8R370 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Ushbp1Q8R370 Gm44109-201ENSMUST00000204514 1954 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Ushbp1Q8R370 AC101945.4-201ENSMUST00000228464 1976 ntBASIC5.16□□□□□ -1.58
Ushbp1Q8R370 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ushbp1Q8R370 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
Ushbp1Q8R370 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Ushbp1Q8R370 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Ushbp1Q8R370 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Ushbp1Q8R370 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Ushbp1Q8R370 Gm15312-201ENSMUST00000118827 271 ntBASIC5.16□□□□□ -1.58
Ushbp1Q8R370 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC5.16□□□□□ -1.58
Ushbp1Q8R370 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC5.16□□□□□ -1.58
Ushbp1Q8R370 Gm14516-201ENSMUST00000120012 252 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms