Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm37970-201ENSMUST00000193865 1732 ntBASIC6.18□□□□□ -1.42
Trim47Q8C0E3 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trim47Q8C0E3 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Trim47Q8C0E3 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trim47Q8C0E3 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Trim47Q8C0E3 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trim47Q8C0E3 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trim47Q8C0E3 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Trim47Q8C0E3 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Trim47Q8C0E3 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Trim47Q8C0E3 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Trim47Q8C0E3 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Trim47Q8C0E3 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trim47Q8C0E3 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Trim47Q8C0E3 Gm37221-201ENSMUST00000194472 3007 ntBASIC6.17□□□□□ -1.42
Trim47Q8C0E3 Gm7709-201ENSMUST00000199391 1858 ntBASIC6.17□□□□□ -1.42
Trim47Q8C0E3 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC6.17□□□□□ -1.42
Trim47Q8C0E3 Cyp2j12-201ENSMUST00000097972 1675 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Trim47Q8C0E3 Gm43180-201ENSMUST00000197541 2886 ntBASIC6.17□□□□□ -1.42
Trim47Q8C0E3 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC6.17□□□□□ -1.42
Trim47Q8C0E3 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Trim47Q8C0E3 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
Trim47Q8C0E3 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC6.17□□□□□ -1.42
Trim47Q8C0E3 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC6.17□□□□□ -1.42
Trim47Q8C0E3 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
Trim47Q8C0E3 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC6.17□□□□□ -1.42
Trim47Q8C0E3 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Trim47Q8C0E3 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Trim47Q8C0E3 Gm23836-201ENSMUST00000104434 129 ntBASIC6.17□□□□□ -1.42
Trim47Q8C0E3 Gm5757-201ENSMUST00000117494 528 ntBASIC6.17□□□□□ -1.42
Trim47Q8C0E3 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC6.17□□□□□ -1.42
Trim47Q8C0E3 Gm11229-201ENSMUST00000121993 437 ntBASIC6.17□□□□□ -1.42
Trim47Q8C0E3 Gm15986-201ENSMUST00000122153 400 ntBASIC6.17□□□□□ -1.42
Trim47Q8C0E3 Gm24216-201ENSMUST00000158259 117 ntBASIC6.17□□□□□ -1.42
Trim47Q8C0E3 Gm24940-201ENSMUST00000158326 108 ntBASIC6.17□□□□□ -1.42
Trim47Q8C0E3 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC6.17□□□□□ -1.42
Trim47Q8C0E3 Gm7953-201ENSMUST00000168278 469 ntBASIC6.17□□□□□ -1.42
Trim47Q8C0E3 Gm24819-201ENSMUST00000175094 166 ntBASIC6.17□□□□□ -1.42
Trim47Q8C0E3 Rhoay-ps2-201ENSMUST00000186362 581 ntBASIC6.17□□□□□ -1.42
Trim47Q8C0E3 Gm2325-201ENSMUST00000186637 581 ntBASIC6.17□□□□□ -1.42
Trim47Q8C0E3 Gm28785-201ENSMUST00000187478 379 ntBASIC6.17□□□□□ -1.42
Trim47Q8C0E3 Gm6137-201ENSMUST00000187552 578 ntBASIC6.17□□□□□ -1.42
Trim47Q8C0E3 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC6.17□□□□□ -1.42
Trim47Q8C0E3 Gm32033-201ENSMUST00000193483 339 ntBASIC6.17□□□□□ -1.42
Trim47Q8C0E3 Gm18036-201ENSMUST00000195256 272 ntBASIC6.17□□□□□ -1.42
Trim47Q8C0E3 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC6.17□□□□□ -1.42
Trim47Q8C0E3 Gm19131-201ENSMUST00000203408 789 ntBASIC6.17□□□□□ -1.42
Trim47Q8C0E3 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC6.17□□□□□ -1.42
Trim47Q8C0E3 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC6.17□□□□□ -1.42
Trim47Q8C0E3 Gm8940-201ENSMUST00000212585 219 ntBASIC6.17□□□□□ -1.42
Trim47Q8C0E3 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC6.17□□□□□ -1.42
Trim47Q8C0E3 AC165347.1-201ENSMUST00000224089 1025 ntBASIC6.17□□□□□ -1.42
Trim47Q8C0E3 AL627387.1-201ENSMUST00000226063 250 ntBASIC6.17□□□□□ -1.42
Trim47Q8C0E3 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Trim47Q8C0E3 Olfr705-201ENSMUST00000060879 951 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Trim47Q8C0E3 Gm10064-201ENSMUST00000071235 399 ntBASIC6.17□□□□□ -1.42
Trim47Q8C0E3 Gm26228-201ENSMUST00000082512 107 ntBASIC6.17□□□□□ -1.42
Trim47Q8C0E3 Gm25080-201ENSMUST00000082526 107 ntBASIC6.17□□□□□ -1.42
Trim47Q8C0E3 Mir337-201ENSMUST00000083592 97 ntBASIC6.17□□□□□ -1.42
Trim47Q8C0E3 Gm25518-201ENSMUST00000083864 107 ntBASIC6.17□□□□□ -1.42
Trim47Q8C0E3 AL591843.1-201ENSMUST00000223686 3082 ntBASIC6.17□□□□□ -1.42
Trim47Q8C0E3 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC6.17□□□□□ -1.42
Trim47Q8C0E3 Ezh1-201ENSMUST00000100417 3636 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Trim47Q8C0E3 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Trim47Q8C0E3 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC6.17□□□□□ -1.42
Trim47Q8C0E3 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Trim47Q8C0E3 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Trim47Q8C0E3 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Trim47Q8C0E3 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Trim47Q8C0E3 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Trim47Q8C0E3 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC6.16□□□□□ -1.42
Trim47Q8C0E3 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Trim47Q8C0E3 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Trim47Q8C0E3 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Trim47Q8C0E3 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC6.16□□□□□ -1.42
Trim47Q8C0E3 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trim47Q8C0E3 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Trim47Q8C0E3 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC6.16□□□□□ -1.42
Trim47Q8C0E3 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trim47Q8C0E3 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trim47Q8C0E3 Gm42436-201ENSMUST00000198804 3656 ntBASIC6.16□□□□□ -1.42
Trim47Q8C0E3 Gm43648-201ENSMUST00000197775 2485 ntBASIC6.16□□□□□ -1.42
Trim47Q8C0E3 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC6.16□□□□□ -1.42
Trim47Q8C0E3 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Trim47Q8C0E3 Gm14792-201ENSMUST00000119725 258 ntBASIC6.16□□□□□ -1.42
Trim47Q8C0E3 Gm11481-201ENSMUST00000120069 255 ntBASIC6.16□□□□□ -1.42
Trim47Q8C0E3 Gm11679-201ENSMUST00000121830 779 ntBASIC6.16□□□□□ -1.42
Trim47Q8C0E3 Gm12650-201ENSMUST00000121966 258 ntBASIC6.16□□□□□ -1.42
Trim47Q8C0E3 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC6.16□□□□□ -1.42
Trim47Q8C0E3 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC6.16□□□□□ -1.42
Trim47Q8C0E3 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC6.16□□□□□ -1.42
Trim47Q8C0E3 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC6.16□□□□□ -1.42
Trim47Q8C0E3 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC6.16□□□□□ -1.42
Trim47Q8C0E3 Gm23411-201ENSMUST00000157988 62 ntBASIC6.16□□□□□ -1.42
Trim47Q8C0E3 Gm24676-201ENSMUST00000158758 75 ntBASIC6.16□□□□□ -1.42
Trim47Q8C0E3 Gm17020-201ENSMUST00000172274 274 ntBASIC6.16□□□□□ -1.42
Trim47Q8C0E3 Gm21842-201ENSMUST00000177552 498 ntBASIC6.16□□□□□ -1.42
Trim47Q8C0E3 Gm21626-201ENSMUST00000177791 498 ntBASIC6.16□□□□□ -1.42
Trim47Q8C0E3 Gm21562-201ENSMUST00000177888 498 ntBASIC6.16□□□□□ -1.42
Trim47Q8C0E3 Gm21539-201ENSMUST00000177925 498 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 103.4 ms