Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Gm24117-201ENSMUST00000103973 133 ntBASIC3.48□□□□□ -1.85
Nkx2-1P50220 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
Nkx2-1P50220 Gm15108-201ENSMUST00000116160 803 ntBASIC3.48□□□□□ -1.85
Nkx2-1P50220 Gm16089-201ENSMUST00000117679 336 ntBASIC3.48□□□□□ -1.85
Nkx2-1P50220 Gm9001-201ENSMUST00000121642 399 ntBASIC3.48□□□□□ -1.85
Nkx2-1P50220 Gm15111-201ENSMUST00000122142 878 ntBASIC3.48□□□□□ -1.85
Nkx2-1P50220 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC3.48□□□□□ -1.85
Nkx2-1P50220 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC3.48□□□□□ -1.85
Nkx2-1P50220 Gm12226-201ENSMUST00000144172 876 ntBASIC3.48□□□□□ -1.85
Nkx2-1P50220 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC3.48□□□□□ -1.85
Nkx2-1P50220 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC3.48□□□□□ -1.85
Nkx2-1P50220 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC3.48□□□□□ -1.85
Nkx2-1P50220 Gm26401-201ENSMUST00000158502 76 ntBASIC3.48□□□□□ -1.85
Nkx2-1P50220 Gm16558-201ENSMUST00000163015 532 ntBASIC3.48□□□□□ -1.85
Nkx2-1P50220 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC3.48□□□□□ -1.85
Nkx2-1P50220 Gm27233-201ENSMUST00000184030 307 ntBASIC3.48□□□□□ -1.85
Nkx2-1P50220 Mir6938-201ENSMUST00000184173 63 ntBASIC3.48□□□□□ -1.85
Nkx2-1P50220 Gm27817-201ENSMUST00000184302 233 ntBASIC3.48□□□□□ -1.85
Nkx2-1P50220 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC3.48□□□□□ -1.85
Nkx2-1P50220 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Nkx2-1P50220 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Nkx2-1P50220 Gm9687-201ENSMUST00000189312 602 ntBASIC3.48□□□□□ -1.85
Nkx2-1P50220 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC3.48□□□□□ -1.85
Nkx2-1P50220 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC3.48□□□□□ -1.85
Nkx2-1P50220 Gm6719-201ENSMUST00000202067 335 ntBASIC3.48□□□□□ -1.85
Nkx2-1P50220 Gm42850-201ENSMUST00000202094 201 ntBASIC3.48□□□□□ -1.85
Nkx2-1P50220 Gm8774-201ENSMUST00000203621 692 ntBASIC3.48□□□□□ -1.85
Nkx2-1P50220 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Nkx2-1P50220 AL929265.1-201ENSMUST00000213427 125 ntBASIC3.48□□□□□ -1.85
Nkx2-1P50220 AL929285.1-201ENSMUST00000215522 229 ntBASIC3.48□□□□□ -1.85
Nkx2-1P50220 AC157017.2-201ENSMUST00000218354 777 ntBASIC3.48□□□□□ -1.85
Nkx2-1P50220 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC3.48□□□□□ -1.85
Nkx2-1P50220 AC153662.1-201ENSMUST00000222220 270 ntBASIC3.48□□□□□ -1.85
Nkx2-1P50220 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC3.48□□□□□ -1.85
Nkx2-1P50220 AC173481.1-201ENSMUST00000223351 270 ntBASIC3.48□□□□□ -1.85
Nkx2-1P50220 Olfr1462-201ENSMUST00000076832 924 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Nkx2-1P50220 Gm26449-201ENSMUST00000082452 104 ntBASIC3.48□□□□□ -1.85
Nkx2-1P50220 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Nkx2-1P50220 Obox4-ps27-201ENSMUST00000179203 1362 ntBASIC3.48□□□□□ -1.85
Nkx2-1P50220 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC3.48□□□□□ -1.85
Nkx2-1P50220 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
Nkx2-1P50220 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Nkx2-1P50220 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
Nkx2-1P50220 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Nkx2-1P50220 Synpr-207ENSMUST00000223583 3362 ntBASIC3.48□□□□□ -1.85
Nkx2-1P50220 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Nkx2-1P50220 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Nkx2-1P50220 Gm37498-201ENSMUST00000193524 4002 ntBASIC3.47□□□□□ -1.85
Nkx2-1P50220 Gm8675-201ENSMUST00000201408 1856 ntBASIC3.47□□□□□ -1.85
Nkx2-1P50220 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Nkx2-1P50220 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Nkx2-1P50220 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
Nkx2-1P50220 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Nkx2-1P50220 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
Nkx2-1P50220 Wdr49-203ENSMUST00000204341 1344 ntTSL 5 BASIC3.47□□□□□ -1.85
Nkx2-1P50220 Gm43527-201ENSMUST00000198749 3178 ntBASIC3.47□□□□□ -1.85
Nkx2-1P50220 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Nkx2-1P50220 Igip-201ENSMUST00000210490 1417 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Nkx2-1P50220 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Nkx2-1P50220 AC091683.1-201ENSMUST00000222307 2446 ntBASIC3.47□□□□□ -1.85
Nkx2-1P50220 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Nkx2-1P50220 Gm26019-201ENSMUST00000104407 119 ntBASIC3.47□□□□□ -1.85
Nkx2-1P50220 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Nkx2-1P50220 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
Nkx2-1P50220 Gm15426-201ENSMUST00000117823 556 ntBASIC3.47□□□□□ -1.85
Nkx2-1P50220 Gm6806-201ENSMUST00000120092 1006 ntBASIC3.47□□□□□ -1.85
Nkx2-1P50220 Gm11252-201ENSMUST00000120572 939 ntBASIC3.47□□□□□ -1.85
Nkx2-1P50220 Gm13932-201ENSMUST00000120873 610 ntBASIC3.47□□□□□ -1.85
Nkx2-1P50220 Clec2f-201ENSMUST00000121051 374 ntBASIC3.47□□□□□ -1.85
Nkx2-1P50220 Gm12096-201ENSMUST00000121149 829 ntBASIC3.47□□□□□ -1.85
Nkx2-1P50220 Gm13502-201ENSMUST00000121574 684 ntBASIC3.47□□□□□ -1.85
Nkx2-1P50220 Gm15116-201ENSMUST00000122248 663 ntBASIC3.47□□□□□ -1.85
Nkx2-1P50220 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC3.47□□□□□ -1.85
Nkx2-1P50220 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC3.47□□□□□ -1.85
Nkx2-1P50220 Gm23034-201ENSMUST00000158001 147 ntBASIC3.47□□□□□ -1.85
Nkx2-1P50220 Gm25555-201ENSMUST00000158078 111 ntBASIC3.47□□□□□ -1.85
Nkx2-1P50220 Gm23513-201ENSMUST00000158181 133 ntBASIC3.47□□□□□ -1.85
Nkx2-1P50220 Gm22156-201ENSMUST00000158409 141 ntBASIC3.47□□□□□ -1.85
Nkx2-1P50220 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Nkx2-1P50220 Vmn1r113-201ENSMUST00000168794 894 ntTSL 5 BASIC3.47□□□□□ -1.85
Nkx2-1P50220 Gm17159-201ENSMUST00000169043 482 ntBASIC3.47□□□□□ -1.85
Nkx2-1P50220 Gm18358-201ENSMUST00000173179 1277 ntBASIC3.47□□□□□ -1.85
Nkx2-1P50220 Gm16451-201ENSMUST00000173484 924 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Nkx2-1P50220 Mir5103-201ENSMUST00000175111 79 ntBASIC3.47□□□□□ -1.85
Nkx2-1P50220 Gm8604-201ENSMUST00000183150 965 ntBASIC3.47□□□□□ -1.85
Nkx2-1P50220 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC3.47□□□□□ -1.85
Nkx2-1P50220 Mir6903-201ENSMUST00000183597 88 ntBASIC3.47□□□□□ -1.85
Nkx2-1P50220 Gm27355-201ENSMUST00000185045 128 ntBASIC3.47□□□□□ -1.85
Nkx2-1P50220 Gm19503-201ENSMUST00000187109 241 ntBASIC3.47□□□□□ -1.85
Nkx2-1P50220 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC3.47□□□□□ -1.85
Nkx2-1P50220 Gm29563-201ENSMUST00000187249 496 ntBASIC3.47□□□□□ -1.85
Nkx2-1P50220 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC3.47□□□□□ -1.85
Nkx2-1P50220 Gm35570-201ENSMUST00000198730 681 ntBASIC3.47□□□□□ -1.85
Nkx2-1P50220 Gm42857-201ENSMUST00000200823 339 ntBASIC3.47□□□□□ -1.85
Nkx2-1P50220 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC3.47□□□□□ -1.85
Nkx2-1P50220 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC3.47□□□□□ -1.85
Nkx2-1P50220 Gm45236-201ENSMUST00000208632 229 ntBASIC3.47□□□□□ -1.85
Nkx2-1P50220 Olfr540-ps1-201ENSMUST00000210499 612 ntBASIC3.47□□□□□ -1.85
Nkx2-1P50220 Gm45240-201ENSMUST00000211437 674 ntBASIC3.47□□□□□ -1.85
Nkx2-1P50220 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC3.47□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 101.6 ms