Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm28339-201ENSMUST00000185845 696 ntBASIC3.85□□□□□ -1.79
Col1a1P11087 Gm36991-201ENSMUST00000191800 648 ntBASIC3.85□□□□□ -1.79
Col1a1P11087 Gm33973-201ENSMUST00000195148 534 ntBASIC3.85□□□□□ -1.79
Col1a1P11087 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC3.85□□□□□ -1.79
Col1a1P11087 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC3.85□□□□□ -1.79
Col1a1P11087 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC3.85□□□□□ -1.79
Col1a1P11087 CT030704.1-201ENSMUST00000227521 699 ntBASIC3.85□□□□□ -1.79
Col1a1P11087 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Col1a1P11087 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Col1a1P11087 Gm38069-201ENSMUST00000195360 2144 ntBASIC3.84□□□□□ -1.79
Col1a1P11087 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Col1a1P11087 Gm9343-201ENSMUST00000209016 2609 ntBASIC3.84□□□□□ -1.79
Col1a1P11087 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
Col1a1P11087 Gm11260-201ENSMUST00000121163 942 ntBASIC3.84□□□□□ -1.8
Col1a1P11087 Mir3965-201ENSMUST00000175570 69 ntBASIC3.84□□□□□ -1.8
Col1a1P11087 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC3.84□□□□□ -1.8
Col1a1P11087 Gm19104-201ENSMUST00000198392 679 ntBASIC3.84□□□□□ -1.8
Col1a1P11087 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC3.84□□□□□ -1.8
Col1a1P11087 Gm18585-201ENSMUST00000215197 556 ntBASIC3.84□□□□□ -1.8
Col1a1P11087 Gm25004-201ENSMUST00000083811 161 ntBASIC3.84□□□□□ -1.8
Col1a1P11087 Olfr1046-201ENSMUST00000099902 951 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
Col1a1P11087 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3.84□□□□□ -1.8
Col1a1P11087 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
Col1a1P11087 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
Col1a1P11087 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
Col1a1P11087 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Col1a1P11087 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Col1a1P11087 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Col1a1P11087 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Col1a1P11087 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
Col1a1P11087 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Col1a1P11087 Gm42936-201ENSMUST00000174019 652 ntTSL 3 BASIC3.83□□□□□ -1.8
Col1a1P11087 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC3.83□□□□□ -1.8
Col1a1P11087 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Col1a1P11087 Gm9023-201ENSMUST00000198408 1038 ntBASIC3.83□□□□□ -1.8
Col1a1P11087 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC3.83□□□□□ -1.8
Col1a1P11087 Gm42850-201ENSMUST00000202094 201 ntBASIC3.83□□□□□ -1.8
Col1a1P11087 Gm45735-201ENSMUST00000212779 319 ntBASIC3.83□□□□□ -1.8
Col1a1P11087 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC3.83□□□□□ -1.8
Col1a1P11087 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
Col1a1P11087 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC3.83□□□□□ -1.8
Col1a1P11087 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.83□□□□□ -1.8
Col1a1P11087 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Col1a1P11087 Gm18609-201ENSMUST00000203370 3601 ntBASIC3.82□□□□□ -1.8
Col1a1P11087 AC122408.2-201ENSMUST00000217901 1391 ntBASIC3.82□□□□□ -1.8
Col1a1P11087 Olfr1471-205ENSMUST00000217482 1545 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Col1a1P11087 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Col1a1P11087 Gm11321-201ENSMUST00000121257 902 ntBASIC3.82□□□□□ -1.8
Col1a1P11087 Gm22988-201ENSMUST00000122759 144 ntBASIC3.82□□□□□ -1.8
Col1a1P11087 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC3.82□□□□□ -1.8
Col1a1P11087 Gm37490-201ENSMUST00000195566 724 ntBASIC3.82□□□□□ -1.8
Col1a1P11087 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC3.82□□□□□ -1.8
Col1a1P11087 Gm18644-201ENSMUST00000211458 815 ntBASIC3.82□□□□□ -1.8
Col1a1P11087 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Col1a1P11087 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC3.82□□□□□ -1.8
Col1a1P11087 Gm5176-202ENSMUST00000220267 583 ntBASIC3.82□□□□□ -1.8
Col1a1P11087 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Col1a1P11087 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Col1a1P11087 Olfr1066-201ENSMUST00000099885 942 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Col1a1P11087 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Col1a1P11087 Gm14667-201ENSMUST00000119448 1350 ntBASIC3.82□□□□□ -1.8
Col1a1P11087 AC153729.4-201ENSMUST00000217582 3826 ntBASIC3.81□□□□□ -1.8
Col1a1P11087 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Col1a1P11087 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Col1a1P11087 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.81□□□□□ -1.8
Col1a1P11087 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.81□□□□□ -1.8
Col1a1P11087 Gm42909-201ENSMUST00000196982 3619 ntBASIC3.81□□□□□ -1.8
Col1a1P11087 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Col1a1P11087 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Col1a1P11087 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC3.81□□□□□ -1.8
Col1a1P11087 Gm12677-201ENSMUST00000118668 426 ntBASIC3.81□□□□□ -1.8
Col1a1P11087 Gm26477-201ENSMUST00000122617 323 ntBASIC3.81□□□□□ -1.8
Col1a1P11087 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC3.81□□□□□ -1.8
Col1a1P11087 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC3.81□□□□□ -1.8
Col1a1P11087 Gm21842-201ENSMUST00000177552 498 ntBASIC3.81□□□□□ -1.8
Col1a1P11087 Gm21626-201ENSMUST00000177791 498 ntBASIC3.81□□□□□ -1.8
Col1a1P11087 Gm21562-201ENSMUST00000177888 498 ntBASIC3.81□□□□□ -1.8
Col1a1P11087 Gm21539-201ENSMUST00000177925 498 ntBASIC3.81□□□□□ -1.8
Col1a1P11087 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Col1a1P11087 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Col1a1P11087 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Col1a1P11087 Gm17522-201ENSMUST00000178144 498 ntBASIC3.81□□□□□ -1.8
Col1a1P11087 Gm21599-201ENSMUST00000178249 498 ntBASIC3.81□□□□□ -1.8
Col1a1P11087 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Col1a1P11087 Gm21914-201ENSMUST00000178452 498 ntBASIC3.81□□□□□ -1.8
Col1a1P11087 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Col1a1P11087 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Col1a1P11087 Gm21723-201ENSMUST00000178692 498 ntBASIC3.81□□□□□ -1.8
Col1a1P11087 Gm21916-201ENSMUST00000178771 498 ntBASIC3.81□□□□□ -1.8
Col1a1P11087 Gm21801-201ENSMUST00000178865 498 ntBASIC3.81□□□□□ -1.8
Col1a1P11087 Gm21633-201ENSMUST00000178941 498 ntBASIC3.81□□□□□ -1.8
Col1a1P11087 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Col1a1P11087 Gm17412-201ENSMUST00000179261 468 ntBASIC3.81□□□□□ -1.8
Col1a1P11087 Gm21821-201ENSMUST00000179646 498 ntBASIC3.81□□□□□ -1.8
Col1a1P11087 Gm5527-201ENSMUST00000179821 642 ntBASIC3.81□□□□□ -1.8
Col1a1P11087 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Col1a1P11087 Gm21588-201ENSMUST00000180074 498 ntBASIC3.81□□□□□ -1.8
Col1a1P11087 Gm21780-201ENSMUST00000180128 498 ntBASIC3.81□□□□□ -1.8
Col1a1P11087 Gm21572-201ENSMUST00000180134 498 ntBASIC3.81□□□□□ -1.8
Col1a1P11087 Gm21529-201ENSMUST00000180175 498 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms