Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gm42621-201ENSMUST00000198114 275 ntBASIC3.13□□□□□ -1.91
Col5a1O88207 Gm45733-201ENSMUST00000212988 437 ntBASIC3.13□□□□□ -1.91
Col5a1O88207 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Col5a1O88207 Gm42888-201ENSMUST00000202425 4361 ntBASIC3.13□□□□□ -1.91
Col5a1O88207 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
Col5a1O88207 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Col5a1O88207 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Col5a1O88207 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
Col5a1O88207 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Col5a1O88207 Gm43958-201ENSMUST00000204360 3544 ntBASIC3.12□□□□□ -1.91
Col5a1O88207 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Col5a1O88207 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Col5a1O88207 Gm14581-201ENSMUST00000121726 198 ntBASIC3.12□□□□□ -1.91
Col5a1O88207 Gm23775-201ENSMUST00000158991 249 ntBASIC3.12□□□□□ -1.91
Col5a1O88207 Mir5127-201ENSMUST00000175295 71 ntBASIC3.12□□□□□ -1.91
Col5a1O88207 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC3.12□□□□□ -1.91
Col5a1O88207 Gm9379-201ENSMUST00000196790 646 ntBASIC3.12□□□□□ -1.91
Col5a1O88207 Gm25203-202ENSMUST00000200458 216 ntBASIC3.12□□□□□ -1.91
Col5a1O88207 Gm44964-201ENSMUST00000207011 273 ntBASIC3.12□□□□□ -1.91
Col5a1O88207 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC3.12□□□□□ -1.91
Col5a1O88207 Gm45513-201ENSMUST00000210228 376 ntBASIC3.12□□□□□ -1.91
Col5a1O88207 Gm28710-202ENSMUST00000211738 2987 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Col5a1O88207 AC108416.2-201ENSMUST00000226792 367 ntBASIC3.12□□□□□ -1.91
Col5a1O88207 CT030704.1-201ENSMUST00000227521 699 ntBASIC3.12□□□□□ -1.91
Col5a1O88207 Gm24950-201ENSMUST00000082768 191 ntBASIC3.12□□□□□ -1.91
Col5a1O88207 Gm25203-201ENSMUST00000082842 215 ntBASIC3.12□□□□□ -1.91
Col5a1O88207 Gm23971-201ENSMUST00000083317 191 ntBASIC3.12□□□□□ -1.91
Col5a1O88207 Gm23849-201ENSMUST00000083833 191 ntBASIC3.12□□□□□ -1.91
Col5a1O88207 Gm26316-201ENSMUST00000083886 191 ntBASIC3.12□□□□□ -1.91
Col5a1O88207 Rnu2-10-201ENSMUST00000084010 191 ntBASIC3.12□□□□□ -1.91
Col5a1O88207 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Col5a1O88207 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Col5a1O88207 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Col5a1O88207 Gm10287-202ENSMUST00000180599 4059 ntBASIC3.12□□□□□ -1.91
Col5a1O88207 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Col5a1O88207 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
Col5a1O88207 Gm5362-201ENSMUST00000211968 3085 ntBASIC3.12□□□□□ -1.91
Col5a1O88207 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Col5a1O88207 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
Col5a1O88207 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
Col5a1O88207 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Col5a1O88207 Serpinb7-201ENSMUST00000086690 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Col5a1O88207 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Col5a1O88207 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Col5a1O88207 Gm6300-201ENSMUST00000192393 1498 ntBASIC3.12□□□□□ -1.91
Col5a1O88207 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Col5a1O88207 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Col5a1O88207 Gm13155-201ENSMUST00000119277 646 ntBASIC3.12□□□□□ -1.91
Col5a1O88207 Gm8178-201ENSMUST00000121570 646 ntBASIC3.12□□□□□ -1.91
Col5a1O88207 n-R5s30-201ENSMUST00000122624 122 ntBASIC3.12□□□□□ -1.91
Col5a1O88207 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Col5a1O88207 Gm24289-201ENSMUST00000157629 135 ntBASIC3.12□□□□□ -1.91
Col5a1O88207 Gm23592-201ENSMUST00000157859 117 ntBASIC3.12□□□□□ -1.91
Col5a1O88207 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC3.12□□□□□ -1.91
Col5a1O88207 Gm18604-201ENSMUST00000172535 558 ntBASIC3.12□□□□□ -1.91
Col5a1O88207 Gm5527-201ENSMUST00000179821 642 ntBASIC3.12□□□□□ -1.91
Col5a1O88207 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Col5a1O88207 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC3.12□□□□□ -1.91
Col5a1O88207 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC3.12□□□□□ -1.91
Col5a1O88207 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Col5a1O88207 AC138401.2-201ENSMUST00000220461 365 ntBASIC3.12□□□□□ -1.91
Col5a1O88207 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC3.12□□□□□ -1.91
Col5a1O88207 AC154527.5-201ENSMUST00000224448 496 ntBASIC3.12□□□□□ -1.91
Col5a1O88207 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Col5a1O88207 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Col5a1O88207 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
Col5a1O88207 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Col5a1O88207 Mir1198-201ENSMUST00000116995 121 ntBASIC3.11□□□□□ -1.91
Col5a1O88207 Gm14655-201ENSMUST00000120124 578 ntBASIC3.11□□□□□ -1.91
Col5a1O88207 Gm15190-201ENSMUST00000120855 276 ntBASIC3.11□□□□□ -1.91
Col5a1O88207 Gm16218-201ENSMUST00000155424 388 ntBASIC3.11□□□□□ -1.91
Col5a1O88207 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Col5a1O88207 Gm6947-201ENSMUST00000186254 78 ntBASIC3.11□□□□□ -1.91
Col5a1O88207 Gm45735-201ENSMUST00000212779 319 ntBASIC3.11□□□□□ -1.91
Col5a1O88207 AC167669.3-201ENSMUST00000224720 393 ntBASIC3.11□□□□□ -1.91
Col5a1O88207 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Col5a1O88207 Gm26129-201ENSMUST00000082719 107 ntBASIC3.11□□□□□ -1.91
Col5a1O88207 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Col5a1O88207 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Col5a1O88207 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.11□□□□□ -1.91
Col5a1O88207 Gm44283-201ENSMUST00000204461 3950 ntBASIC3.11□□□□□ -1.91
Col5a1O88207 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
Col5a1O88207 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Col5a1O88207 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Col5a1O88207 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Col5a1O88207 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Col5a1O88207 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
Col5a1O88207 Gm14126-201ENSMUST00000122345 395 ntBASIC3.1□□□□□ -1.91
Col5a1O88207 Hba-ps4-201ENSMUST00000128900 447 ntBASIC3.1□□□□□ -1.91
Col5a1O88207 Gm23902-201ENSMUST00000157571 134 ntBASIC3.1□□□□□ -1.91
Col5a1O88207 Gm17187-201ENSMUST00000164622 410 ntBASIC3.1□□□□□ -1.91
Col5a1O88207 Gm18520-201ENSMUST00000174783 658 ntBASIC3.1□□□□□ -1.91
Col5a1O88207 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Col5a1O88207 Gm29148-201ENSMUST00000188140 336 ntBASIC3.1□□□□□ -1.91
Col5a1O88207 Gm37490-201ENSMUST00000195566 724 ntBASIC3.1□□□□□ -1.91
Col5a1O88207 Gm43899-201ENSMUST00000203675 246 ntBASIC3.1□□□□□ -1.91
Col5a1O88207 Gm43892-201ENSMUST00000204373 265 ntBASIC3.1□□□□□ -1.91
Col5a1O88207 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC3.1□□□□□ -1.91
Col5a1O88207 Gm18585-201ENSMUST00000215197 556 ntBASIC3.1□□□□□ -1.91
Col5a1O88207 AC122301.1-201ENSMUST00000219625 507 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms