Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Gm23753-201ENSMUST00000157575 149 ntBASIC2.54□□□□□ -2
Col6a5A6H584 Gm24537-201ENSMUST00000157950 102 ntBASIC2.54□□□□□ -2
Col6a5A6H584 Gm22666-201ENSMUST00000158717 164 ntBASIC2.54□□□□□ -2
Col6a5A6H584 Gm9587-201ENSMUST00000172449 454 ntBASIC2.54□□□□□ -2
Col6a5A6H584 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC2.54□□□□□ -2
Col6a5A6H584 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC2.54□□□□□ -2
Col6a5A6H584 Gm23847-201ENSMUST00000083829 110 ntBASIC2.54□□□□□ -2
Col6a5A6H584 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Col6a5A6H584 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC2.53□□□□□ -2
Col6a5A6H584 Gm42996-201ENSMUST00000196116 1636 ntBASIC2.53□□□□□ -2
Col6a5A6H584 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC2.53□□□□□ -2
Col6a5A6H584 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC2.53□□□□□ -2
Col6a5A6H584 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
Col6a5A6H584 Gm18719-201ENSMUST00000196696 1413 ntBASIC2.53□□□□□ -2
Col6a5A6H584 Gm10811-201ENSMUST00000221985 2448 ntBASIC2.53□□□□□ -2
Col6a5A6H584 Gm2987-201ENSMUST00000187673 1693 ntBASIC2.53□□□□□ -2
Col6a5A6H584 Gm45066-201ENSMUST00000207528 2551 ntBASIC2.53□□□□□ -2
Col6a5A6H584 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC2.53□□□□□ -2
Col6a5A6H584 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
Col6a5A6H584 AC154386.1-201ENSMUST00000222753 2871 ntBASIC2.53□□□□□ -2
Col6a5A6H584 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC2.53□□□□□ -2
Col6a5A6H584 Gm14901-201ENSMUST00000119001 283 ntBASIC2.53□□□□□ -2
Col6a5A6H584 Gm11881-201ENSMUST00000119408 572 ntBASIC2.53□□□□□ -2
Col6a5A6H584 Gm14714-201ENSMUST00000119743 439 ntBASIC2.53□□□□□ -2
Col6a5A6H584 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC2.53□□□□□ -2
Col6a5A6H584 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC2.53□□□□□ -2
Col6a5A6H584 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC2.53□□□□□ -2
Col6a5A6H584 Mir6401-201ENSMUST00000184499 109 ntBASIC2.53□□□□□ -2
Col6a5A6H584 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Col6a5A6H584 Gm18748-201ENSMUST00000198507 622 ntBASIC2.53□□□□□ -2
Col6a5A6H584 Gm5176-202ENSMUST00000220267 583 ntBASIC2.53□□□□□ -2
Col6a5A6H584 n-R5s176-201ENSMUST00000082683 109 ntBASIC2.53□□□□□ -2
Col6a5A6H584 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC2.53□□□□□ -2
Col6a5A6H584 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Col6a5A6H584 Gm16332-201ENSMUST00000134229 2967 ntBASIC2.53□□□□□ -2
Col6a5A6H584 AC147615.2-201ENSMUST00000219876 2154 ntBASIC2.53□□□□□ -2
Col6a5A6H584 Gm43466-201ENSMUST00000197836 5214 ntBASIC2.53□□□□□ -2
Col6a5A6H584 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC2.53□□□□□ -2
Col6a5A6H584 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
Col6a5A6H584 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
Col6a5A6H584 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
Col6a5A6H584 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC2.53□□□□□ -2
Col6a5A6H584 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
Col6a5A6H584 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2.01
Col6a5A6H584 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
Col6a5A6H584 Gm23951-201ENSMUST00000104029 132 ntBASIC2.53□□□□□ -2.01
Col6a5A6H584 Gm15936-201ENSMUST00000118706 460 ntBASIC2.53□□□□□ -2.01
Col6a5A6H584 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC2.53□□□□□ -2.01
Col6a5A6H584 Gm25642-201ENSMUST00000175137 66 ntBASIC2.53□□□□□ -2.01
Col6a5A6H584 Gm28660-201ENSMUST00000186496 253 ntBASIC2.53□□□□□ -2.01
Col6a5A6H584 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC2.53□□□□□ -2.01
Col6a5A6H584 Gm45013-201ENSMUST00000206883 178 ntBASIC2.53□□□□□ -2.01
Col6a5A6H584 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC2.53□□□□□ -2.01
Col6a5A6H584 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC2.53□□□□□ -2.01
Col6a5A6H584 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Col6a5A6H584 AC132237.1-201ENSMUST00000220950 4475 ntBASIC2.52□□□□□ -2.01
Col6a5A6H584 Gm37329-201ENSMUST00000192973 2057 ntBASIC2.52□□□□□ -2.01
Col6a5A6H584 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
Col6a5A6H584 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Col6a5A6H584 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Col6a5A6H584 Gm15180-201ENSMUST00000117745 492 ntBASIC2.52□□□□□ -2.01
Col6a5A6H584 Gm11456-201ENSMUST00000121070 256 ntBASIC2.52□□□□□ -2.01
Col6a5A6H584 Gm8600-201ENSMUST00000186320 905 ntBASIC2.52□□□□□ -2.01
Col6a5A6H584 Gm42960-201ENSMUST00000202160 241 ntBASIC2.52□□□□□ -2.01
Col6a5A6H584 Gm8209-201ENSMUST00000206386 553 ntBASIC2.52□□□□□ -2.01
Col6a5A6H584 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC2.52□□□□□ -2.01
Col6a5A6H584 AC153361.1-201ENSMUST00000219679 247 ntBASIC2.52□□□□□ -2.01
Col6a5A6H584 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
Col6a5A6H584 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
Col6a5A6H584 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Col6a5A6H584 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Col6a5A6H584 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
Col6a5A6H584 Zfa-ps-201ENSMUST00000180526 2231 ntBASIC2.52□□□□□ -2.01
Col6a5A6H584 Gm22782-201ENSMUST00000104082 132 ntBASIC2.52□□□□□ -2.01
Col6a5A6H584 Gm24067-201ENSMUST00000104514 85 ntBASIC2.52□□□□□ -2.01
Col6a5A6H584 Gm23803-201ENSMUST00000104610 132 ntBASIC2.52□□□□□ -2.01
Col6a5A6H584 Gm15844-201ENSMUST00000118016 576 ntBASIC2.52□□□□□ -2.01
Col6a5A6H584 Gm25113-201ENSMUST00000157185 143 ntBASIC2.52□□□□□ -2.01
Col6a5A6H584 Tshb-206ENSMUST00000200041 537 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Col6a5A6H584 Sult2a7-202ENSMUST00000209744 792 ntTSL 5 BASIC2.52□□□□□ -2.01
Col6a5A6H584 Gm17820-201ENSMUST00000220213 1068 ntBASIC2.52□□□□□ -2.01
Col6a5A6H584 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
Col6a5A6H584 Olfr492-201ENSMUST00000079865 945 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Col6a5A6H584 Olfr1104-201ENSMUST00000099869 933 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Col6a5A6H584 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Col6a5A6H584 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
Col6a5A6H584 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Col6a5A6H584 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Col6a5A6H584 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
Col6a5A6H584 Gm7470-201ENSMUST00000194219 2095 ntBASIC2.51□□□□□ -2.01
Col6a5A6H584 AC160931.3-201ENSMUST00000222111 2267 ntBASIC2.51□□□□□ -2.01
Col6a5A6H584 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
Col6a5A6H584 Gm26061-201ENSMUST00000175584 108 ntBASIC2.51□□□□□ -2.01
Col6a5A6H584 Mir6398-201ENSMUST00000184541 102 ntBASIC2.51□□□□□ -2.01
Col6a5A6H584 Gm6947-201ENSMUST00000186254 78 ntBASIC2.51□□□□□ -2.01
Col6a5A6H584 Gm44694-201ENSMUST00000205317 1298 ntBASIC2.51□□□□□ -2.01
Col6a5A6H584 Gm7368-201ENSMUST00000213307 367 ntBASIC2.51□□□□□ -2.01
Col6a5A6H584 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Col6a5A6H584 Gm22979-201ENSMUST00000082609 159 ntBASIC2.51□□□□□ -2.01
Col6a5A6H584 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 93.3 ms