Protein–RNA interactions for Protein: A0A075B625

Trav4d-3, T cell receptor alpha variable 4D-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4d-3A0A075B625 Gm7335-201ENSMUST00000172475 373 ntBASIC2.17□□□□□ -2.06
Trav4d-3A0A075B625 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC2.17□□□□□ -2.06
Trav4d-3A0A075B625 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Trav4d-3A0A075B625 Mir7008-201ENSMUST00000184398 63 ntBASIC2.17□□□□□ -2.06
Trav4d-3A0A075B625 Gm2950-201ENSMUST00000185530 520 ntBASIC2.17□□□□□ -2.06
Trav4d-3A0A075B625 Gm6680-201ENSMUST00000192789 950 ntBASIC2.17□□□□□ -2.06
Trav4d-3A0A075B625 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
Trav4d-3A0A075B625 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC2.17□□□□□ -2.06
Trav4d-3A0A075B625 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC2.17□□□□□ -2.06
Trav4d-3A0A075B625 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC2.17□□□□□ -2.06
Trav4d-3A0A075B625 Gm44972-201ENSMUST00000206419 406 ntBASIC2.17□□□□□ -2.06
Trav4d-3A0A075B625 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Trav4d-3A0A075B625 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC2.17□□□□□ -2.06
Trav4d-3A0A075B625 Gm45789-201ENSMUST00000213038 364 ntBASIC2.17□□□□□ -2.06
Trav4d-3A0A075B625 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC2.17□□□□□ -2.06
Trav4d-3A0A075B625 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC2.17□□□□□ -2.06
Trav4d-3A0A075B625 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Trav4d-3A0A075B625 Ap3m1-208ENSMUST00000224016 764 ntBASIC2.17□□□□□ -2.06
Trav4d-3A0A075B625 AC115735.1-201ENSMUST00000226633 350 ntBASIC2.17□□□□□ -2.06
Trav4d-3A0A075B625 AC160550.3-201ENSMUST00000226818 400 ntBASIC2.17□□□□□ -2.06
Trav4d-3A0A075B625 AC127371.1-202ENSMUST00000228923 306 ntBASIC2.17□□□□□ -2.06
Trav4d-3A0A075B625 Gm7099-201ENSMUST00000080066 554 ntBASIC2.17□□□□□ -2.06
Trav4d-3A0A075B625 Gm25699-201ENSMUST00000082896 167 ntBASIC2.17□□□□□ -2.06
Trav4d-3A0A075B625 Olfr877-201ENSMUST00000086063 936 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Trav4d-3A0A075B625 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Trav4d-3A0A075B625 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
Trav4d-3A0A075B625 Gm44800-201ENSMUST00000207510 1855 ntBASIC2.17□□□□□ -2.06
Trav4d-3A0A075B625 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC2.17□□□□□ -2.06
Trav4d-3A0A075B625 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Trav4d-3A0A075B625 Gm10811-201ENSMUST00000221985 2448 ntBASIC2.17□□□□□ -2.06
Trav4d-3A0A075B625 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Trav4d-3A0A075B625 Gm37674-201ENSMUST00000194177 1834 ntBASIC2.17□□□□□ -2.06
Trav4d-3A0A075B625 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
Trav4d-3A0A075B625 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
Trav4d-3A0A075B625 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Trav4d-3A0A075B625 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Trav4d-3A0A075B625 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Trav4d-3A0A075B625 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Trav4d-3A0A075B625 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Trav4d-3A0A075B625 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Trav4d-3A0A075B625 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC2.16□□□□□ -2.06
Trav4d-3A0A075B625 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC2.16□□□□□ -2.06
Trav4d-3A0A075B625 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Trav4d-3A0A075B625 Gm26085-201ENSMUST00000157900 116 ntBASIC2.16□□□□□ -2.06
Trav4d-3A0A075B625 Gm22531-201ENSMUST00000158819 140 ntBASIC2.16□□□□□ -2.06
Trav4d-3A0A075B625 Gm5967-201ENSMUST00000172723 494 ntBASIC2.16□□□□□ -2.06
Trav4d-3A0A075B625 Mir5134-201ENSMUST00000175529 78 ntBASIC2.16□□□□□ -2.06
Trav4d-3A0A075B625 Mir6345-201ENSMUST00000184286 128 ntBASIC2.16□□□□□ -2.06
Trav4d-3A0A075B625 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Trav4d-3A0A075B625 Gm18800-202ENSMUST00000188688 1105 ntBASIC2.16□□□□□ -2.06
Trav4d-3A0A075B625 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Trav4d-3A0A075B625 Gm37355-201ENSMUST00000193345 606 ntBASIC2.16□□□□□ -2.06
Trav4d-3A0A075B625 Gm5551-201ENSMUST00000199720 690 ntBASIC2.16□□□□□ -2.06
Trav4d-3A0A075B625 Gm43899-201ENSMUST00000203675 246 ntBASIC2.16□□□□□ -2.06
Trav4d-3A0A075B625 Gm44234-201ENSMUST00000204246 900 ntBASIC2.16□□□□□ -2.06
Trav4d-3A0A075B625 Gm17780-201ENSMUST00000207142 612 ntBASIC2.16□□□□□ -2.06
Trav4d-3A0A075B625 Gm19126-201ENSMUST00000207896 509 ntBASIC2.16□□□□□ -2.06
Trav4d-3A0A075B625 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Trav4d-3A0A075B625 Gm44845-201ENSMUST00000208773 335 ntBASIC2.16□□□□□ -2.06
Trav4d-3A0A075B625 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC2.16□□□□□ -2.06
Trav4d-3A0A075B625 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Trav4d-3A0A075B625 AC154510.1-201ENSMUST00000223925 737 ntBASIC2.16□□□□□ -2.06
Trav4d-3A0A075B625 AC154241.1-201ENSMUST00000223952 356 ntBASIC2.16□□□□□ -2.06
Trav4d-3A0A075B625 CT025525.1-201ENSMUST00000226325 1054 ntBASIC2.16□□□□□ -2.06
Trav4d-3A0A075B625 Fabp2-201ENSMUST00000023820 965 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Trav4d-3A0A075B625 Olfr813-201ENSMUST00000064893 933 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Trav4d-3A0A075B625 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Trav4d-3A0A075B625 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Trav4d-3A0A075B625 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC2.16□□□□□ -2.06
Trav4d-3A0A075B625 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Trav4d-3A0A075B625 Gm21032-201ENSMUST00000208108 2578 ntBASIC2.16□□□□□ -2.06
Trav4d-3A0A075B625 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
Trav4d-3A0A075B625 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC2.16□□□□□ -2.06
Trav4d-3A0A075B625 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
Trav4d-3A0A075B625 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
Trav4d-3A0A075B625 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
Trav4d-3A0A075B625 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Trav4d-3A0A075B625 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.15□□□□□ -2.07
Trav4d-3A0A075B625 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Trav4d-3A0A075B625 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC2.15□□□□□ -2.07
Trav4d-3A0A075B625 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
Trav4d-3A0A075B625 Gm23178-201ENSMUST00000116782 95 ntBASIC2.15□□□□□ -2.07
Trav4d-3A0A075B625 Mir466j-201ENSMUST00000116876 122 ntBASIC2.15□□□□□ -2.07
Trav4d-3A0A075B625 Gm13733-201ENSMUST00000117290 535 ntBASIC2.15□□□□□ -2.07
Trav4d-3A0A075B625 Gm11372-201ENSMUST00000117348 570 ntBASIC2.15□□□□□ -2.07
Trav4d-3A0A075B625 Gm13567-201ENSMUST00000118026 247 ntBASIC2.15□□□□□ -2.07
Trav4d-3A0A075B625 Gm14688-201ENSMUST00000119169 303 ntBASIC2.15□□□□□ -2.07
Trav4d-3A0A075B625 Gm13438-201ENSMUST00000120100 573 ntBASIC2.15□□□□□ -2.07
Trav4d-3A0A075B625 Gm13460-201ENSMUST00000121274 353 ntBASIC2.15□□□□□ -2.07
Trav4d-3A0A075B625 Gm6027-201ENSMUST00000121467 756 ntBASIC2.15□□□□□ -2.07
Trav4d-3A0A075B625 Gm25150-201ENSMUST00000157121 60 ntBASIC2.15□□□□□ -2.07
Trav4d-3A0A075B625 Gm22637-201ENSMUST00000158144 283 ntBASIC2.15□□□□□ -2.07
Trav4d-3A0A075B625 Gm22532-201ENSMUST00000158822 140 ntBASIC2.15□□□□□ -2.07
Trav4d-3A0A075B625 Gm15838-201ENSMUST00000161575 180 ntBASIC2.15□□□□□ -2.07
Trav4d-3A0A075B625 Gm8338-201ENSMUST00000163928 363 ntBASIC2.15□□□□□ -2.07
Trav4d-3A0A075B625 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC2.15□□□□□ -2.07
Trav4d-3A0A075B625 Gm23365-201ENSMUST00000175019 125 ntBASIC2.15□□□□□ -2.07
Trav4d-3A0A075B625 Gm44453-201ENSMUST00000175161 126 ntBASIC2.15□□□□□ -2.07
Trav4d-3A0A075B625 Mir3090-201ENSMUST00000175597 87 ntBASIC2.15□□□□□ -2.07
Trav4d-3A0A075B625 Gm25195-201ENSMUST00000177656 126 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 129.1 ms