Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Nubp1Q9R060 Gm45557-201ENSMUST00000210004 1651 ntBASIC5.73□□□□□ -1.49
Nubp1Q9R060 Gm43285-201ENSMUST00000196563 3592 ntBASIC5.73□□□□□ -1.49
Nubp1Q9R060 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
Nubp1Q9R060 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Nubp1Q9R060 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC5.73□□□□□ -1.49
Nubp1Q9R060 Gm12417-201ENSMUST00000119153 403 ntBASIC5.73□□□□□ -1.49
Nubp1Q9R060 Gm11398-201ENSMUST00000120330 320 ntBASIC5.73□□□□□ -1.49
Nubp1Q9R060 Gm13424-201ENSMUST00000122301 354 ntBASIC5.73□□□□□ -1.49
Nubp1Q9R060 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC5.73□□□□□ -1.49
Nubp1Q9R060 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC5.73□□□□□ -1.49
Nubp1Q9R060 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC5.73□□□□□ -1.49
Nubp1Q9R060 Gm26162-201ENSMUST00000157793 132 ntBASIC5.73□□□□□ -1.49
Nubp1Q9R060 Gm23855-201ENSMUST00000158377 135 ntBASIC5.73□□□□□ -1.49
Nubp1Q9R060 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC5.73□□□□□ -1.49
Nubp1Q9R060 Mir6361-201ENSMUST00000185079 101 ntBASIC5.73□□□□□ -1.49
Nubp1Q9R060 Gm17934-201ENSMUST00000192818 422 ntBASIC5.73□□□□□ -1.49
Nubp1Q9R060 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC5.73□□□□□ -1.49
Nubp1Q9R060 Trbv11-201ENSMUST00000194354 260 ntBASIC5.73□□□□□ -1.49
Nubp1Q9R060 Gm37774-201ENSMUST00000194401 245 ntBASIC5.73□□□□□ -1.49
Nubp1Q9R060 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
Nubp1Q9R060 Olfr1285-201ENSMUST00000208523 903 ntBASIC5.73□□□□□ -1.49
Nubp1Q9R060 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC5.73□□□□□ -1.49
Nubp1Q9R060 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Nubp1Q9R060 Vaultrc5-201ENSMUST00000083211 143 ntBASIC5.73□□□□□ -1.49
Nubp1Q9R060 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Nubp1Q9R060 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
Nubp1Q9R060 Gm38125-201ENSMUST00000194136 3438 ntBASIC5.73□□□□□ -1.49
Nubp1Q9R060 Olfr506-202ENSMUST00000209296 3228 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
Nubp1Q9R060 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Nubp1Q9R060 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC5.73□□□□□ -1.49
Nubp1Q9R060 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC5.73□□□□□ -1.49
Nubp1Q9R060 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC5.73□□□□□ -1.49
Nubp1Q9R060 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
Nubp1Q9R060 Gm4954-201ENSMUST00000135069 1601 ntBASIC5.73□□□□□ -1.49
Nubp1Q9R060 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Nubp1Q9R060 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Nubp1Q9R060 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Nubp1Q9R060 Olfr1426-205ENSMUST00000219155 2503 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Nubp1Q9R060 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Nubp1Q9R060 Gm44130-201ENSMUST00000205157 3004 ntBASIC5.72□□□□□ -1.49
Nubp1Q9R060 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Nubp1Q9R060 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Nubp1Q9R060 AC154227.1-201ENSMUST00000228809 2467 ntBASIC5.72□□□□□ -1.49
Nubp1Q9R060 Gm43281-201ENSMUST00000202522 2704 ntBASIC5.72□□□□□ -1.49
Nubp1Q9R060 Gm44661-201ENSMUST00000208830 3503 ntBASIC5.72□□□□□ -1.49
Nubp1Q9R060 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Nubp1Q9R060 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Nubp1Q9R060 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Nubp1Q9R060 Rgs22-203ENSMUST00000172831 4006 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Nubp1Q9R060 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Nubp1Q9R060 Gm25917-201ENSMUST00000104267 130 ntBASIC5.72□□□□□ -1.49
Nubp1Q9R060 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Nubp1Q9R060 Gm12722-201ENSMUST00000118507 493 ntBASIC5.72□□□□□ -1.49
Nubp1Q9R060 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC5.72□□□□□ -1.49
Nubp1Q9R060 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC5.72□□□□□ -1.49
Nubp1Q9R060 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC5.72□□□□□ -1.49
Nubp1Q9R060 Gm15096-201ENSMUST00000121918 878 ntBASIC5.72□□□□□ -1.49
Nubp1Q9R060 Gm24629-201ENSMUST00000122762 89 ntBASIC5.72□□□□□ -1.49
Nubp1Q9R060 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Nubp1Q9R060 Gm23318-201ENSMUST00000158000 108 ntBASIC5.72□□□□□ -1.49
Nubp1Q9R060 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Nubp1Q9R060 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Nubp1Q9R060 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC5.72□□□□□ -1.49
Nubp1Q9R060 Gm27512-201ENSMUST00000175328 126 ntBASIC5.72□□□□□ -1.49
Nubp1Q9R060 Gm38131-201ENSMUST00000192449 430 ntBASIC5.72□□□□□ -1.49
Nubp1Q9R060 Gm9379-201ENSMUST00000196790 646 ntBASIC5.72□□□□□ -1.49
Nubp1Q9R060 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC5.72□□□□□ -1.49
Nubp1Q9R060 Cyp2b27-ps-201ENSMUST00000205582 1279 ntBASIC5.72□□□□□ -1.49
Nubp1Q9R060 Gm8523-201ENSMUST00000211386 552 ntBASIC5.72□□□□□ -1.49
Nubp1Q9R060 AC161114.1-201ENSMUST00000218223 474 ntBASIC5.72□□□□□ -1.49
Nubp1Q9R060 AC138401.1-201ENSMUST00000221533 116 ntBASIC5.72□□□□□ -1.49
Nubp1Q9R060 AC211878.2-201ENSMUST00000222486 488 ntBASIC5.72□□□□□ -1.49
Nubp1Q9R060 AC134254.5-201ENSMUST00000223436 400 ntBASIC5.72□□□□□ -1.49
Nubp1Q9R060 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Nubp1Q9R060 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Nubp1Q9R060 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Nubp1Q9R060 Gm35629-201ENSMUST00000209684 2241 ntBASIC5.72□□□□□ -1.49
Nubp1Q9R060 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Nubp1Q9R060 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC5.72□□□□□ -1.49
Nubp1Q9R060 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Nubp1Q9R060 Gm19131-202ENSMUST00000203464 3208 ntBASIC5.72□□□□□ -1.49
Nubp1Q9R060 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Nubp1Q9R060 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Nubp1Q9R060 Serpinb9-201ENSMUST00000006391 3397 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Nubp1Q9R060 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Nubp1Q9R060 Adam30-201ENSMUST00000050342 3510 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
Nubp1Q9R060 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Nubp1Q9R060 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.49
Nubp1Q9R060 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Nubp1Q9R060 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
Nubp1Q9R060 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Nubp1Q9R060 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC5.71□□□□□ -1.5
Nubp1Q9R060 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Nubp1Q9R060 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Nubp1Q9R060 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Nubp1Q9R060 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Nubp1Q9R060 Mir19b-1-201ENSMUST00000102301 87 ntBASIC5.71□□□□□ -1.5
Nubp1Q9R060 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC5.71□□□□□ -1.5
Nubp1Q9R060 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC5.71□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms