Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Fam26d-202ENSMUST00000218239 3075 ntBASIC5.78□□□□□ -1.48
Clp1Q99LI9 AC154755.2-201ENSMUST00000224384 2857 ntBASIC5.78□□□□□ -1.48
Clp1Q99LI9 Gm18432-201ENSMUST00000195568 1451 ntBASIC5.78□□□□□ -1.48
Clp1Q99LI9 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Clp1Q99LI9 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC5.78□□□□□ -1.48
Clp1Q99LI9 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Clp1Q99LI9 Gm24117-201ENSMUST00000103973 133 ntBASIC5.78□□□□□ -1.48
Clp1Q99LI9 Gm24350-201ENSMUST00000104163 133 ntBASIC5.78□□□□□ -1.48
Clp1Q99LI9 Gm23879-201ENSMUST00000116874 126 ntBASIC5.78□□□□□ -1.48
Clp1Q99LI9 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Clp1Q99LI9 Gm11366-201ENSMUST00000119279 429 ntBASIC5.78□□□□□ -1.48
Clp1Q99LI9 Gm14647-201ENSMUST00000119392 680 ntBASIC5.78□□□□□ -1.48
Clp1Q99LI9 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
Clp1Q99LI9 Gm3851-201ENSMUST00000168653 318 ntBASIC5.78□□□□□ -1.48
Clp1Q99LI9 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Clp1Q99LI9 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC5.78□□□□□ -1.48
Clp1Q99LI9 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Clp1Q99LI9 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC5.78□□□□□ -1.48
Clp1Q99LI9 Gm26993-201ENSMUST00000182766 789 ntBASIC5.78□□□□□ -1.48
Clp1Q99LI9 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Clp1Q99LI9 Gm38076-201ENSMUST00000193889 450 ntBASIC5.78□□□□□ -1.48
Clp1Q99LI9 Gm38243-201ENSMUST00000194737 1567 ntBASIC5.78□□□□□ -1.48
Clp1Q99LI9 Gm42542-201ENSMUST00000197978 268 ntBASIC5.78□□□□□ -1.48
Clp1Q99LI9 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC5.78□□□□□ -1.48
Clp1Q99LI9 Gm44259-201ENSMUST00000204996 298 ntBASIC5.78□□□□□ -1.48
Clp1Q99LI9 Gm7726-201ENSMUST00000206241 231 ntBASIC5.78□□□□□ -1.48
Clp1Q99LI9 Gm45344-201ENSMUST00000211610 341 ntBASIC5.78□□□□□ -1.48
Clp1Q99LI9 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC5.78□□□□□ -1.48
Clp1Q99LI9 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC5.78□□□□□ -1.48
Clp1Q99LI9 AC157772.2-201ENSMUST00000228202 259 ntBASIC5.78□□□□□ -1.48
Clp1Q99LI9 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Clp1Q99LI9 Olfr114-201ENSMUST00000076914 1000 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Clp1Q99LI9 n-R5s62-201ENSMUST00000082780 96 ntBASIC5.78□□□□□ -1.48
Clp1Q99LI9 Gm22740-201ENSMUST00000083439 109 ntBASIC5.78□□□□□ -1.48
Clp1Q99LI9 n-R5s13-201ENSMUST00000093707 119 ntBASIC5.78□□□□□ -1.48
Clp1Q99LI9 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Clp1Q99LI9 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
Clp1Q99LI9 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Clp1Q99LI9 Gm9239-201ENSMUST00000186942 2557 ntBASIC5.78□□□□□ -1.48
Clp1Q99LI9 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC5.78□□□□□ -1.48
Clp1Q99LI9 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC5.78□□□□□ -1.48
Clp1Q99LI9 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Clp1Q99LI9 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Clp1Q99LI9 Gm26814-201ENSMUST00000181178 4149 ntBASIC5.78□□□□□ -1.48
Clp1Q99LI9 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Clp1Q99LI9 Gm42680-201ENSMUST00000196238 2500 ntBASIC5.78□□□□□ -1.48
Clp1Q99LI9 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Clp1Q99LI9 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Clp1Q99LI9 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Clp1Q99LI9 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Clp1Q99LI9 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.48
Clp1Q99LI9 Gm43360-201ENSMUST00000197656 2887 ntBASIC5.77□□□□□ -1.49
Clp1Q99LI9 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Clp1Q99LI9 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC5.77□□□□□ -1.49
Clp1Q99LI9 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Clp1Q99LI9 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Clp1Q99LI9 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
Clp1Q99LI9 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC5.77□□□□□ -1.49
Clp1Q99LI9 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Clp1Q99LI9 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Clp1Q99LI9 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Clp1Q99LI9 Olfr1382-203ENSMUST00000213707 4294 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Clp1Q99LI9 Olfr1382-204ENSMUST00000213899 4285 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Clp1Q99LI9 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Clp1Q99LI9 Olfr1382-205ENSMUST00000217564 4287 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Clp1Q99LI9 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Clp1Q99LI9 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Clp1Q99LI9 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC5.77□□□□□ -1.49
Clp1Q99LI9 Gm12765-201ENSMUST00000117273 615 ntBASIC5.77□□□□□ -1.49
Clp1Q99LI9 Gm3267-201ENSMUST00000118671 473 ntBASIC5.77□□□□□ -1.49
Clp1Q99LI9 Gm11229-201ENSMUST00000121993 437 ntBASIC5.77□□□□□ -1.49
Clp1Q99LI9 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Clp1Q99LI9 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Clp1Q99LI9 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Clp1Q99LI9 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC5.77□□□□□ -1.49
Clp1Q99LI9 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Clp1Q99LI9 Gm16490-201ENSMUST00000165299 351 ntBASIC5.77□□□□□ -1.49
Clp1Q99LI9 Gm25361-201ENSMUST00000179358 76 ntBASIC5.77□□□□□ -1.49
Clp1Q99LI9 Gm4854-201ENSMUST00000185902 574 ntBASIC5.77□□□□□ -1.49
Clp1Q99LI9 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Clp1Q99LI9 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC5.77□□□□□ -1.49
Clp1Q99LI9 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC5.77□□□□□ -1.49
Clp1Q99LI9 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC5.77□□□□□ -1.49
Clp1Q99LI9 Ighv1-40-201ENSMUST00000194231 345 ntBASIC5.77□□□□□ -1.49
Clp1Q99LI9 Gm38008-201ENSMUST00000195333 518 ntBASIC5.77□□□□□ -1.49
Clp1Q99LI9 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC5.77□□□□□ -1.49
Clp1Q99LI9 Gm43524-201ENSMUST00000197278 298 ntBASIC5.77□□□□□ -1.49
Clp1Q99LI9 Gm43444-201ENSMUST00000198123 291 ntBASIC5.77□□□□□ -1.49
Clp1Q99LI9 Gm8319-201ENSMUST00000205708 641 ntBASIC5.77□□□□□ -1.49
Clp1Q99LI9 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC5.77□□□□□ -1.49
Clp1Q99LI9 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC5.77□□□□□ -1.49
Clp1Q99LI9 CT571268.1-201ENSMUST00000222320 407 ntBASIC5.77□□□□□ -1.49
Clp1Q99LI9 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Clp1Q99LI9 Gm23626-201ENSMUST00000082458 133 ntBASIC5.77□□□□□ -1.49
Clp1Q99LI9 Gm22456-201ENSMUST00000082578 125 ntBASIC5.77□□□□□ -1.49
Clp1Q99LI9 Gm25147-201ENSMUST00000083030 105 ntBASIC5.77□□□□□ -1.49
Clp1Q99LI9 AC151971.5-201ENSMUST00000214422 3254 ntBASIC5.77□□□□□ -1.49
Clp1Q99LI9 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC5.77□□□□□ -1.49
Clp1Q99LI9 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Clp1Q99LI9 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 90 ms