Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC6.2□□□□□ -1.42
Trim47Q8C0E3 Gm18100-201ENSMUST00000200897 452 ntBASIC6.2□□□□□ -1.42
Trim47Q8C0E3 Glud-ps-201ENSMUST00000206310 657 ntBASIC6.2□□□□□ -1.42
Trim47Q8C0E3 Gm45730-201ENSMUST00000212560 395 ntBASIC6.2□□□□□ -1.42
Trim47Q8C0E3 AC142273.1-201ENSMUST00000213723 673 ntBASIC6.2□□□□□ -1.42
Trim47Q8C0E3 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC6.2□□□□□ -1.42
Trim47Q8C0E3 CT010455.1-201ENSMUST00000218579 413 ntBASIC6.2□□□□□ -1.42
Trim47Q8C0E3 AC158803.1-201ENSMUST00000219495 316 ntBASIC6.2□□□□□ -1.42
Trim47Q8C0E3 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Trim47Q8C0E3 AC165284.1-201ENSMUST00000228614 458 ntBASIC6.2□□□□□ -1.42
Trim47Q8C0E3 AC098719.1-201ENSMUST00000228920 371 ntBASIC6.2□□□□□ -1.42
Trim47Q8C0E3 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Trim47Q8C0E3 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Trim47Q8C0E3 Gm22828-201ENSMUST00000083768 107 ntBASIC6.2□□□□□ -1.42
Trim47Q8C0E3 Gm25682-201ENSMUST00000083942 164 ntBASIC6.2□□□□□ -1.42
Trim47Q8C0E3 Gm26329-201ENSMUST00000093723 110 ntBASIC6.2□□□□□ -1.42
Trim47Q8C0E3 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
Trim47Q8C0E3 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Trim47Q8C0E3 Gm43164-201ENSMUST00000202529 2128 ntBASIC6.2□□□□□ -1.42
Trim47Q8C0E3 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Trim47Q8C0E3 Gm42819-201ENSMUST00000199630 5121 ntBASIC6.2□□□□□ -1.42
Trim47Q8C0E3 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Trim47Q8C0E3 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Trim47Q8C0E3 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Trim47Q8C0E3 Gm4011-201ENSMUST00000174657 2555 ntBASIC6.19□□□□□ -1.42
Trim47Q8C0E3 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC6.19□□□□□ -1.42
Trim47Q8C0E3 Gm18757-201ENSMUST00000207938 3141 ntBASIC6.19□□□□□ -1.42
Trim47Q8C0E3 AC163731.1-201ENSMUST00000225696 3118 ntBASIC6.19□□□□□ -1.42
Trim47Q8C0E3 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Trim47Q8C0E3 Abcc2-202ENSMUST00000099413 1926 ntBASIC6.19□□□□□ -1.42
Trim47Q8C0E3 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Trim47Q8C0E3 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC6.19□□□□□ -1.42
Trim47Q8C0E3 Gm13214-201ENSMUST00000122137 408 ntBASIC6.19□□□□□ -1.42
Trim47Q8C0E3 Gm22106-201ENSMUST00000122544 127 ntBASIC6.19□□□□□ -1.42
Trim47Q8C0E3 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC6.19□□□□□ -1.42
Trim47Q8C0E3 Gm23233-201ENSMUST00000157301 137 ntBASIC6.19□□□□□ -1.42
Trim47Q8C0E3 Gm22916-201ENSMUST00000157616 119 ntBASIC6.19□□□□□ -1.42
Trim47Q8C0E3 Gm26170-201ENSMUST00000158419 148 ntBASIC6.19□□□□□ -1.42
Trim47Q8C0E3 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Trim47Q8C0E3 Gm20523-201ENSMUST00000174340 1124 ntBASIC6.19□□□□□ -1.42
Trim47Q8C0E3 Gm23402-201ENSMUST00000178130 107 ntBASIC6.19□□□□□ -1.42
Trim47Q8C0E3 Gm26189-201ENSMUST00000179879 107 ntBASIC6.19□□□□□ -1.42
Trim47Q8C0E3 Mir6363-201ENSMUST00000184880 114 ntBASIC6.19□□□□□ -1.42
Trim47Q8C0E3 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC6.19□□□□□ -1.42
Trim47Q8C0E3 Gm29813-201ENSMUST00000195856 447 ntBASIC6.19□□□□□ -1.42
Trim47Q8C0E3 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC6.19□□□□□ -1.42
Trim47Q8C0E3 Gm44157-201ENSMUST00000204720 410 ntBASIC6.19□□□□□ -1.42
Trim47Q8C0E3 Gm45146-201ENSMUST00000207108 221 ntBASIC6.19□□□□□ -1.42
Trim47Q8C0E3 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC6.19□□□□□ -1.42
Trim47Q8C0E3 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC6.19□□□□□ -1.42
Trim47Q8C0E3 CT485612.4-201ENSMUST00000223405 250 ntBASIC6.19□□□□□ -1.42
Trim47Q8C0E3 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Trim47Q8C0E3 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Trim47Q8C0E3 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
Trim47Q8C0E3 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
Trim47Q8C0E3 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Trim47Q8C0E3 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Trim47Q8C0E3 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
Trim47Q8C0E3 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Trim47Q8C0E3 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC6.19□□□□□ -1.42
Trim47Q8C0E3 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Trim47Q8C0E3 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Trim47Q8C0E3 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Trim47Q8C0E3 Olfr813-202ENSMUST00000204622 2410 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Trim47Q8C0E3 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Trim47Q8C0E3 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trim47Q8C0E3 Gm44235-201ENSMUST00000204312 3058 ntBASIC6.18□□□□□ -1.42
Trim47Q8C0E3 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trim47Q8C0E3 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trim47Q8C0E3 Gm11561-201ENSMUST00000117429 417 ntBASIC6.18□□□□□ -1.42
Trim47Q8C0E3 Gm14359-201ENSMUST00000118883 424 ntBASIC6.18□□□□□ -1.42
Trim47Q8C0E3 Gm12850-201ENSMUST00000119210 436 ntBASIC6.18□□□□□ -1.42
Trim47Q8C0E3 Gm14577-201ENSMUST00000121134 256 ntBASIC6.18□□□□□ -1.42
Trim47Q8C0E3 n-R5s201-201ENSMUST00000122622 116 ntBASIC6.18□□□□□ -1.42
Trim47Q8C0E3 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Trim47Q8C0E3 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC6.18□□□□□ -1.42
Trim47Q8C0E3 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Trim47Q8C0E3 Ear-ps4-201ENSMUST00000166834 450 ntBASIC6.18□□□□□ -1.42
Trim47Q8C0E3 Gm22917-201ENSMUST00000180116 110 ntBASIC6.18□□□□□ -1.42
Trim47Q8C0E3 Gm23523-201ENSMUST00000180190 107 ntBASIC6.18□□□□□ -1.42
Trim47Q8C0E3 Gm26970-201ENSMUST00000182990 964 ntBASIC6.18□□□□□ -1.42
Trim47Q8C0E3 Gm27754-201ENSMUST00000183340 126 ntBASIC6.18□□□□□ -1.42
Trim47Q8C0E3 Mir6417-201ENSMUST00000183815 116 ntBASIC6.18□□□□□ -1.42
Trim47Q8C0E3 Mir6238-201ENSMUST00000184140 129 ntBASIC6.18□□□□□ -1.42
Trim47Q8C0E3 Gm27747-201ENSMUST00000184707 85 ntBASIC6.18□□□□□ -1.42
Trim47Q8C0E3 Gm29062-201ENSMUST00000186032 694 ntBASIC6.18□□□□□ -1.42
Trim47Q8C0E3 Gm28255-201ENSMUST00000187101 694 ntBASIC6.18□□□□□ -1.42
Trim47Q8C0E3 Gm29592-201ENSMUST00000189434 370 ntBASIC6.18□□□□□ -1.42
Trim47Q8C0E3 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC6.18□□□□□ -1.42
Trim47Q8C0E3 Gm43651-201ENSMUST00000199796 439 ntBASIC6.18□□□□□ -1.42
Trim47Q8C0E3 Gm33601-201ENSMUST00000210001 961 ntBASIC6.18□□□□□ -1.42
Trim47Q8C0E3 Gm45879-201ENSMUST00000212521 392 ntBASIC6.18□□□□□ -1.42
Trim47Q8C0E3 AC154623.1-201ENSMUST00000224348 805 ntBASIC6.18□□□□□ -1.42
Trim47Q8C0E3 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trim47Q8C0E3 Gm22740-201ENSMUST00000083439 109 ntBASIC6.18□□□□□ -1.42
Trim47Q8C0E3 Mir218-2-201ENSMUST00000083649 110 ntBASIC6.18□□□□□ -1.42
Trim47Q8C0E3 Olfr1314-201ENSMUST00000099598 939 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Trim47Q8C0E3 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Trim47Q8C0E3 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Trim47Q8C0E3 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 120.2 ms