Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.28
Trim35Q8C006 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.28
Trim35Q8C006 Vmn2r57-201ENSMUST00000165029 2592 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.28
Trim35Q8C006 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.28
Trim35Q8C006 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC7.09□□□□□ -1.28
Trim35Q8C006 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
Trim35Q8C006 Slc30a7-201ENSMUST00000067485 9020 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trim35Q8C006 Gm14326-202ENSMUST00000108930 1807 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
Trim35Q8C006 Ptpn22-201ENSMUST00000029433 2743 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trim35Q8C006 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trim35Q8C006 Gm37606-201ENSMUST00000191816 3116 ntBASIC7.08□□□□□ -1.28
Trim35Q8C006 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Trim35Q8C006 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Trim35Q8C006 Kmt2c-201ENSMUST00000045291 14967 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Trim35Q8C006 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Trim35Q8C006 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC7.08□□□□□ -1.28
Trim35Q8C006 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trim35Q8C006 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Trim35Q8C006 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Trim35Q8C006 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Trim35Q8C006 Gm44130-201ENSMUST00000205157 3004 ntBASIC7.08□□□□□ -1.28
Trim35Q8C006 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trim35Q8C006 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Trim35Q8C006 Rhox4g-201ENSMUST00000115166 979 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trim35Q8C006 Gm15067-201ENSMUST00000119534 156 ntBASIC7.08□□□□□ -1.28
Trim35Q8C006 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC7.08□□□□□ -1.28
Trim35Q8C006 Gm26179-201ENSMUST00000177723 132 ntBASIC7.08□□□□□ -1.28
Trim35Q8C006 Rhox4a2-201ENSMUST00000179915 901 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trim35Q8C006 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Trim35Q8C006 Gm27218-201ENSMUST00000183745 392 ntBASIC7.08□□□□□ -1.28
Trim35Q8C006 1700028D13Rik-202ENSMUST00000187272 675 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Trim35Q8C006 Gm28801-201ENSMUST00000188761 449 ntBASIC7.08□□□□□ -1.28
Trim35Q8C006 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC7.08□□□□□ -1.28
Trim35Q8C006 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC7.08□□□□□ -1.28
Trim35Q8C006 Gm45766-201ENSMUST00000211900 478 ntTSL 3 BASIC7.08□□□□□ -1.28
Trim35Q8C006 AC124778.1-201ENSMUST00000216013 162 ntBASIC7.08□□□□□ -1.28
Trim35Q8C006 AC153943.1-201ENSMUST00000219312 256 ntBASIC7.08□□□□□ -1.28
Trim35Q8C006 AC127242.4-201ENSMUST00000221242 470 ntBASIC7.08□□□□□ -1.28
Trim35Q8C006 AC156790.5-201ENSMUST00000227075 231 ntBASIC7.08□□□□□ -1.28
Trim35Q8C006 Rhox4e-201ENSMUST00000089075 978 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trim35Q8C006 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Trim35Q8C006 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Trim35Q8C006 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Trim35Q8C006 Gm37347-201ENSMUST00000193969 3071 ntBASIC7.08□□□□□ -1.28
Trim35Q8C006 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trim35Q8C006 Olfr961-202ENSMUST00000219295 3374 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Trim35Q8C006 AC163032.1-201ENSMUST00000220671 2970 ntBASIC7.08□□□□□ -1.28
Trim35Q8C006 Gm16973-202ENSMUST00000180752 1972 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Trim35Q8C006 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Trim35Q8C006 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim35Q8C006 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim35Q8C006 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim35Q8C006 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim35Q8C006 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim35Q8C006 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC7.07□□□□□ -1.28
Trim35Q8C006 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC7.07□□□□□ -1.28
Trim35Q8C006 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC7.07□□□□□ -1.28
Trim35Q8C006 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim35Q8C006 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC7.07□□□□□ -1.28
Trim35Q8C006 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Trim35Q8C006 U2surp-201ENSMUST00000078374 3520 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim35Q8C006 Zfp667-201ENSMUST00000086327 3672 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim35Q8C006 Gm25396-201ENSMUST00000103981 133 ntBASIC7.07□□□□□ -1.28
Trim35Q8C006 Snord90-201ENSMUST00000104568 111 ntBASIC7.07□□□□□ -1.28
Trim35Q8C006 Gm8421-201ENSMUST00000119439 305 ntBASIC7.07□□□□□ -1.28
Trim35Q8C006 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC7.07□□□□□ -1.28
Trim35Q8C006 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC7.07□□□□□ -1.28
Trim35Q8C006 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC7.07□□□□□ -1.28
Trim35Q8C006 Gm16224-201ENSMUST00000127711 412 ntTSL 3 BASIC7.07□□□□□ -1.28
Trim35Q8C006 Gm16330-201ENSMUST00000128324 297 ntBASIC7.07□□□□□ -1.28
Trim35Q8C006 Gm26414-201ENSMUST00000157674 269 ntBASIC7.07□□□□□ -1.28
Trim35Q8C006 Gm16318-201ENSMUST00000162402 601 ntBASIC7.07□□□□□ -1.28
Trim35Q8C006 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC7.07□□□□□ -1.28
Trim35Q8C006 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC7.07□□□□□ -1.28
Trim35Q8C006 Gm23139-201ENSMUST00000179454 132 ntBASIC7.07□□□□□ -1.28
Trim35Q8C006 Gm27684-201ENSMUST00000183778 80 ntBASIC7.07□□□□□ -1.28
Trim35Q8C006 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC7.07□□□□□ -1.28
Trim35Q8C006 Gm29535-201ENSMUST00000185723 109 ntBASIC7.07□□□□□ -1.28
Trim35Q8C006 Gm28143-201ENSMUST00000191082 109 ntBASIC7.07□□□□□ -1.28
Trim35Q8C006 Gm32308-201ENSMUST00000203053 280 ntBASIC7.07□□□□□ -1.28
Trim35Q8C006 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Trim35Q8C006 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim35Q8C006 CT030182.4-201ENSMUST00000223647 645 ntBASIC7.07□□□□□ -1.28
Trim35Q8C006 AC170086.2-201ENSMUST00000224733 803 ntBASIC7.07□□□□□ -1.28
Trim35Q8C006 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim35Q8C006 Gm26055-201ENSMUST00000083038 107 ntBASIC7.07□□□□□ -1.28
Trim35Q8C006 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim35Q8C006 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim35Q8C006 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim35Q8C006 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim35Q8C006 Zim3-202ENSMUST00000203365 3226 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim35Q8C006 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim35Q8C006 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Trim35Q8C006 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Trim35Q8C006 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim35Q8C006 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim35Q8C006 Iars-202ENSMUST00000164260 3789 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Trim35Q8C006 Gm19801-201ENSMUST00000218231 1882 ntBASIC7.07□□□□□ -1.28
Trim35Q8C006 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim35Q8C006 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms