Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trim56Q80VI1 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC5.88□□□□□ -1.47
Trim56Q80VI1 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC5.88□□□□□ -1.47
Trim56Q80VI1 Gm24166-201ENSMUST00000082724 135 ntBASIC5.88□□□□□ -1.47
Trim56Q80VI1 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trim56Q80VI1 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trim56Q80VI1 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trim56Q80VI1 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trim56Q80VI1 Gm18180-201ENSMUST00000187562 1484 ntBASIC5.88□□□□□ -1.47
Trim56Q80VI1 Gm3985-201ENSMUST00000132101 2515 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Trim56Q80VI1 AC129085.3-201ENSMUST00000225686 1705 ntBASIC5.88□□□□□ -1.47
Trim56Q80VI1 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trim56Q80VI1 Zfp182-202ENSMUST00000115333 3130 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trim56Q80VI1 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Trim56Q80VI1 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Trim56Q80VI1 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
Trim56Q80VI1 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Trim56Q80VI1 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Trim56Q80VI1 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Trim56Q80VI1 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Trim56Q80VI1 Gm23424-201ENSMUST00000103889 110 ntBASIC5.87□□□□□ -1.47
Trim56Q80VI1 Gm14558-201ENSMUST00000117458 381 ntBASIC5.87□□□□□ -1.47
Trim56Q80VI1 Gm6923-201ENSMUST00000118343 406 ntBASIC5.87□□□□□ -1.47
Trim56Q80VI1 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Trim56Q80VI1 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC5.87□□□□□ -1.47
Trim56Q80VI1 Gm22870-201ENSMUST00000157501 112 ntBASIC5.87□□□□□ -1.47
Trim56Q80VI1 Gm24847-201ENSMUST00000158032 108 ntBASIC5.87□□□□□ -1.47
Trim56Q80VI1 Gm22765-201ENSMUST00000158371 128 ntBASIC5.87□□□□□ -1.47
Trim56Q80VI1 Mir5112-201ENSMUST00000174897 60 ntBASIC5.87□□□□□ -1.47
Trim56Q80VI1 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Trim56Q80VI1 Gm26177-201ENSMUST00000178683 107 ntBASIC5.87□□□□□ -1.47
Trim56Q80VI1 Gm23003-201ENSMUST00000179948 107 ntBASIC5.87□□□□□ -1.47
Trim56Q80VI1 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC5.87□□□□□ -1.47
Trim56Q80VI1 Gm21070-201ENSMUST00000182425 985 ntBASIC5.87□□□□□ -1.47
Trim56Q80VI1 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Trim56Q80VI1 Gm38050-201ENSMUST00000191904 238 ntBASIC5.87□□□□□ -1.47
Trim56Q80VI1 Gm36984-201ENSMUST00000192770 235 ntBASIC5.87□□□□□ -1.47
Trim56Q80VI1 Gm6510-201ENSMUST00000195916 574 ntBASIC5.87□□□□□ -1.47
Trim56Q80VI1 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Trim56Q80VI1 Gm45590-201ENSMUST00000209715 262 ntBASIC5.87□□□□□ -1.47
Trim56Q80VI1 Gm29785-201ENSMUST00000217033 383 ntBASIC5.87□□□□□ -1.47
Trim56Q80VI1 AC147240.1-201ENSMUST00000218767 431 ntBASIC5.87□□□□□ -1.47
Trim56Q80VI1 AC101984.1-201ENSMUST00000219639 402 ntBASIC5.87□□□□□ -1.47
Trim56Q80VI1 AC211878.2-201ENSMUST00000222486 488 ntBASIC5.87□□□□□ -1.47
Trim56Q80VI1 Olfr690-201ENSMUST00000061920 1062 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Trim56Q80VI1 Gm23503-201ENSMUST00000083903 107 ntBASIC5.87□□□□□ -1.47
Trim56Q80VI1 Gm3867-201ENSMUST00000086108 279 ntBASIC5.87□□□□□ -1.47
Trim56Q80VI1 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Trim56Q80VI1 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC5.87□□□□□ -1.47
Trim56Q80VI1 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Trim56Q80VI1 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC5.87□□□□□ -1.47
Trim56Q80VI1 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Trim56Q80VI1 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC5.87□□□□□ -1.47
Trim56Q80VI1 Gm44171-201ENSMUST00000203701 2109 ntBASIC5.87□□□□□ -1.47
Trim56Q80VI1 Gm43784-201ENSMUST00000202922 2436 ntBASIC5.87□□□□□ -1.47
Trim56Q80VI1 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Trim56Q80VI1 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Trim56Q80VI1 AC153532.2-201ENSMUST00000219753 3844 ntBASIC5.87□□□□□ -1.47
Trim56Q80VI1 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim56Q80VI1 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Trim56Q80VI1 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim56Q80VI1 Gm37504-201ENSMUST00000192537 2374 ntBASIC5.86□□□□□ -1.47
Trim56Q80VI1 Gm42869-201ENSMUST00000199953 2121 ntBASIC5.86□□□□□ -1.47
Trim56Q80VI1 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Trim56Q80VI1 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Trim56Q80VI1 Gm23691-201ENSMUST00000101878 107 ntBASIC5.86□□□□□ -1.47
Trim56Q80VI1 Gm26396-201ENSMUST00000104093 132 ntBASIC5.86□□□□□ -1.47
Trim56Q80VI1 Gm24608-201ENSMUST00000104381 136 ntBASIC5.86□□□□□ -1.47
Trim56Q80VI1 Gm9308-201ENSMUST00000119073 448 ntBASIC5.86□□□□□ -1.47
Trim56Q80VI1 Gm14731-201ENSMUST00000119216 376 ntBASIC5.86□□□□□ -1.47
Trim56Q80VI1 Gm12543-201ENSMUST00000120410 543 ntBASIC5.86□□□□□ -1.47
Trim56Q80VI1 Gm12685-201ENSMUST00000121702 214 ntBASIC5.86□□□□□ -1.47
Trim56Q80VI1 Gm22343-201ENSMUST00000122648 286 ntBASIC5.86□□□□□ -1.47
Trim56Q80VI1 Gm16290-201ENSMUST00000161175 474 ntBASIC5.86□□□□□ -1.47
Trim56Q80VI1 Gm17081-201ENSMUST00000167363 478 ntBASIC5.86□□□□□ -1.47
Trim56Q80VI1 Gm17538-201ENSMUST00000168236 327 ntBASIC5.86□□□□□ -1.47
Trim56Q80VI1 Gm24810-201ENSMUST00000175317 70 ntBASIC5.86□□□□□ -1.47
Trim56Q80VI1 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC5.86□□□□□ -1.47
Trim56Q80VI1 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC5.86□□□□□ -1.47
Trim56Q80VI1 Gm9775-201ENSMUST00000189402 331 ntBASIC5.86□□□□□ -1.47
Trim56Q80VI1 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC5.86□□□□□ -1.47
Trim56Q80VI1 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC5.86□□□□□ -1.47
Trim56Q80VI1 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC5.86□□□□□ -1.47
Trim56Q80VI1 Mirlet7e-201ENSMUST00000196737 93 ntBASIC5.86□□□□□ -1.47
Trim56Q80VI1 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC5.86□□□□□ -1.47
Trim56Q80VI1 Gm2607-201ENSMUST00000212389 627 ntBASIC5.86□□□□□ -1.47
Trim56Q80VI1 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC5.86□□□□□ -1.47
Trim56Q80VI1 Gm18488-201ENSMUST00000215082 364 ntBASIC5.86□□□□□ -1.47
Trim56Q80VI1 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC5.86□□□□□ -1.47
Trim56Q80VI1 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC5.86□□□□□ -1.47
Trim56Q80VI1 AC164567.4-201ENSMUST00000219708 483 ntBASIC5.86□□□□□ -1.47
Trim56Q80VI1 Gm8231-201ENSMUST00000221617 783 ntBASIC5.86□□□□□ -1.47
Trim56Q80VI1 AC167140.1-201ENSMUST00000224710 403 ntBASIC5.86□□□□□ -1.47
Trim56Q80VI1 CT025525.4-201ENSMUST00000227728 277 ntBASIC5.86□□□□□ -1.47
Trim56Q80VI1 AC166369.1-201ENSMUST00000228126 351 ntBASIC5.86□□□□□ -1.47
Trim56Q80VI1 Mir17-201ENSMUST00000083574 84 ntBASIC5.86□□□□□ -1.47
Trim56Q80VI1 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Trim56Q80VI1 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Trim56Q80VI1 Gm43826-201ENSMUST00000199604 2612 ntBASIC5.86□□□□□ -1.47
Trim56Q80VI1 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms