Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Pcdh19Q80TF3 Mir337-201ENSMUST00000083592 97 ntBASIC5.44□□□□□ -1.54
Pcdh19Q80TF3 Rny1-201ENSMUST00000083767 112 ntBASIC5.44□□□□□ -1.54
Pcdh19Q80TF3 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Pcdh19Q80TF3 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC5.44□□□□□ -1.54
Pcdh19Q80TF3 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Pcdh19Q80TF3 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Pcdh19Q80TF3 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC5.44□□□□□ -1.54
Pcdh19Q80TF3 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Pcdh19Q80TF3 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Pcdh19Q80TF3 Gm32592-201ENSMUST00000205146 3124 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 Gm42923-201ENSMUST00000198438 2896 ntBASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 Gm14520-201ENSMUST00000119258 387 ntBASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 Gm14472-201ENSMUST00000119815 282 ntBASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 Gm24584-201ENSMUST00000157972 107 ntBASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 Gm20523-201ENSMUST00000174340 1124 ntBASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 Mir3066-201ENSMUST00000175296 83 ntBASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 Gm23191-201ENSMUST00000179147 107 ntBASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 Gm22286-201ENSMUST00000179708 107 ntBASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 Gm27754-201ENSMUST00000183340 126 ntBASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 Mir7087-201ENSMUST00000184840 70 ntBASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 Gm29228-201ENSMUST00000185489 418 ntBASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 Gm29147-201ENSMUST00000186846 315 ntBASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 Gm28429-201ENSMUST00000188521 363 ntBASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 Gm29592-201ENSMUST00000189434 370 ntBASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 Gm29475-201ENSMUST00000190767 312 ntBASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 Gm28160-201ENSMUST00000191229 315 ntBASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 Gm38185-201ENSMUST00000193195 694 ntBASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 Gm38040-201ENSMUST00000193505 225 ntBASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 Gm45735-201ENSMUST00000212779 319 ntBASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 Gm8158-201ENSMUST00000219220 465 ntBASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 Gm8249-201ENSMUST00000219225 465 ntBASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 AC157570.3-201ENSMUST00000219281 205 ntBASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 Gm8112-201ENSMUST00000219637 465 ntBASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 Gm4263-201ENSMUST00000220693 1101 ntBASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 Gm22749-201ENSMUST00000082490 107 ntBASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 Gm22807-201ENSMUST00000082737 129 ntBASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 Gm22508-201ENSMUST00000082772 110 ntBASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 Gm24856-201ENSMUST00000082809 107 ntBASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 Gm25258-201ENSMUST00000083049 107 ntBASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 Gm24535-201ENSMUST00000083140 107 ntBASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 Gm22352-201ENSMUST00000083917 107 ntBASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 AC124516.3-201ENSMUST00000221302 3613 ntBASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Pcdh19Q80TF3 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Pcdh19Q80TF3 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Pcdh19Q80TF3 Gm44660-201ENSMUST00000207134 2465 ntBASIC5.42□□□□□ -1.54
Pcdh19Q80TF3 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC5.42□□□□□ -1.54
Pcdh19Q80TF3 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Pcdh19Q80TF3 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Pcdh19Q80TF3 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Pcdh19Q80TF3 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Pcdh19Q80TF3 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Pcdh19Q80TF3 Gm23744-201ENSMUST00000104231 149 ntBASIC5.42□□□□□ -1.54
Pcdh19Q80TF3 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Pcdh19Q80TF3 Gm12245-201ENSMUST00000117266 357 ntBASIC5.42□□□□□ -1.54
Pcdh19Q80TF3 Gm15215-201ENSMUST00000117773 489 ntBASIC5.42□□□□□ -1.54
Pcdh19Q80TF3 Gm15211-201ENSMUST00000118932 528 ntBASIC5.42□□□□□ -1.54
Pcdh19Q80TF3 Mir3112-201ENSMUST00000175431 82 ntBASIC5.42□□□□□ -1.54
Pcdh19Q80TF3 Mir5624-201ENSMUST00000176635 61 ntBASIC5.42□□□□□ -1.54
Pcdh19Q80TF3 Gm22852-201ENSMUST00000177899 101 ntBASIC5.42□□□□□ -1.54
Pcdh19Q80TF3 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC5.42□□□□□ -1.54
Pcdh19Q80TF3 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC5.42□□□□□ -1.54
Pcdh19Q80TF3 Gm37495-201ENSMUST00000194590 264 ntBASIC5.42□□□□□ -1.54
Pcdh19Q80TF3 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC5.42□□□□□ -1.54
Pcdh19Q80TF3 Gm43710-201ENSMUST00000199583 452 ntBASIC5.42□□□□□ -1.54
Pcdh19Q80TF3 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC5.42□□□□□ -1.54
Pcdh19Q80TF3 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC5.42□□□□□ -1.54
Pcdh19Q80TF3 AC158641.1-201ENSMUST00000218933 229 ntBASIC5.42□□□□□ -1.54
Pcdh19Q80TF3 AC161884.2-201ENSMUST00000224513 227 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms