Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm6797-201ENSMUST00000119440 512 ntBASIC5.42□□□□□ -1.54
Sh3rf1Q69ZI1 Gm5942-201ENSMUST00000120046 439 ntBASIC5.42□□□□□ -1.54
Sh3rf1Q69ZI1 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC5.42□□□□□ -1.54
Sh3rf1Q69ZI1 Gm24836-201ENSMUST00000122609 108 ntBASIC5.42□□□□□ -1.54
Sh3rf1Q69ZI1 Gm22791-201ENSMUST00000157232 145 ntBASIC5.42□□□□□ -1.54
Sh3rf1Q69ZI1 Gm24499-201ENSMUST00000158446 104 ntBASIC5.42□□□□□ -1.54
Sh3rf1Q69ZI1 Gm25718-201ENSMUST00000158632 118 ntBASIC5.42□□□□□ -1.54
Sh3rf1Q69ZI1 Gm25365-201ENSMUST00000158852 121 ntBASIC5.42□□□□□ -1.54
Sh3rf1Q69ZI1 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Sh3rf1Q69ZI1 Gm22857-201ENSMUST00000174969 134 ntBASIC5.42□□□□□ -1.54
Sh3rf1Q69ZI1 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Sh3rf1Q69ZI1 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Sh3rf1Q69ZI1 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Sh3rf1Q69ZI1 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC5.42□□□□□ -1.54
Sh3rf1Q69ZI1 Gm29524-201ENSMUST00000190819 699 ntBASIC5.42□□□□□ -1.54
Sh3rf1Q69ZI1 Ighv12-2-201ENSMUST00000191949 362 ntBASIC5.42□□□□□ -1.54
Sh3rf1Q69ZI1 Ighv2-8-201ENSMUST00000193935 262 ntBASIC5.42□□□□□ -1.54
Sh3rf1Q69ZI1 Gm43405-201ENSMUST00000198642 337 ntBASIC5.42□□□□□ -1.54
Sh3rf1Q69ZI1 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC5.42□□□□□ -1.54
Sh3rf1Q69ZI1 Gm45735-201ENSMUST00000212779 319 ntBASIC5.42□□□□□ -1.54
Sh3rf1Q69ZI1 AC152415.1-201ENSMUST00000213320 440 ntBASIC5.42□□□□□ -1.54
Sh3rf1Q69ZI1 AC164161.1-201ENSMUST00000214076 639 ntBASIC5.42□□□□□ -1.54
Sh3rf1Q69ZI1 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC5.42□□□□□ -1.54
Sh3rf1Q69ZI1 AC164567.2-201ENSMUST00000219363 445 ntBASIC5.42□□□□□ -1.54
Sh3rf1Q69ZI1 AC166358.7-201ENSMUST00000221132 108 ntBASIC5.42□□□□□ -1.54
Sh3rf1Q69ZI1 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC5.42□□□□□ -1.54
Sh3rf1Q69ZI1 AC125543.5-201ENSMUST00000222799 108 ntBASIC5.42□□□□□ -1.54
Sh3rf1Q69ZI1 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Sh3rf1Q69ZI1 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Sh3rf1Q69ZI1 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Sh3rf1Q69ZI1 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC5.42□□□□□ -1.54
Sh3rf1Q69ZI1 Olfr391-ps-201ENSMUST00000214485 2080 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
Sh3rf1Q69ZI1 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Sh3rf1Q69ZI1 Gm2888-201ENSMUST00000170521 1758 ntAPPRIS P5 TSL 5 BASIC5.42□□□□□ -1.54
Sh3rf1Q69ZI1 Gm7876-202ENSMUST00000171305 1758 ntAPPRIS P5 TSL 5 BASIC5.42□□□□□ -1.54
Sh3rf1Q69ZI1 Gm3127-202ENSMUST00000171866 1758 ntAPPRIS P5 TSL 5 BASIC5.42□□□□□ -1.54
Sh3rf1Q69ZI1 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Sh3rf1Q69ZI1 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
Sh3rf1Q69ZI1 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Sh3rf1Q69ZI1 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
Sh3rf1Q69ZI1 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
Sh3rf1Q69ZI1 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Sh3rf1Q69ZI1 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Sh3rf1Q69ZI1 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Sh3rf1Q69ZI1 Olfr672-202ENSMUST00000213942 1490 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
Sh3rf1Q69ZI1 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
Sh3rf1Q69ZI1 Gm23578-201ENSMUST00000103943 104 ntBASIC5.41□□□□□ -1.54
Sh3rf1Q69ZI1 Gm25758-201ENSMUST00000103987 129 ntBASIC5.41□□□□□ -1.54
Sh3rf1Q69ZI1 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
Sh3rf1Q69ZI1 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC5.41□□□□□ -1.54
Sh3rf1Q69ZI1 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC5.41□□□□□ -1.54
Sh3rf1Q69ZI1 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC5.41□□□□□ -1.54
Sh3rf1Q69ZI1 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC5.41□□□□□ -1.54
Sh3rf1Q69ZI1 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC5.41□□□□□ -1.54
Sh3rf1Q69ZI1 Gm25861-201ENSMUST00000158251 109 ntBASIC5.41□□□□□ -1.54
Sh3rf1Q69ZI1 Gm23774-201ENSMUST00000158990 131 ntBASIC5.41□□□□□ -1.54
Sh3rf1Q69ZI1 Gm20523-201ENSMUST00000174340 1124 ntBASIC5.41□□□□□ -1.54
Sh3rf1Q69ZI1 Gm23793-201ENSMUST00000179396 117 ntBASIC5.41□□□□□ -1.54
Sh3rf1Q69ZI1 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Sh3rf1Q69ZI1 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Sh3rf1Q69ZI1 Gm29228-201ENSMUST00000185489 418 ntBASIC5.41□□□□□ -1.54
Sh3rf1Q69ZI1 Gm6501-201ENSMUST00000187178 916 ntBASIC5.41□□□□□ -1.54
Sh3rf1Q69ZI1 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC5.41□□□□□ -1.54
Sh3rf1Q69ZI1 Gm35648-201ENSMUST00000202304 475 ntBASIC5.41□□□□□ -1.54
Sh3rf1Q69ZI1 Gm43919-201ENSMUST00000204303 364 ntBASIC5.41□□□□□ -1.54
Sh3rf1Q69ZI1 Gm44779-201ENSMUST00000206937 708 ntBASIC5.41□□□□□ -1.54
Sh3rf1Q69ZI1 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Sh3rf1Q69ZI1 Gm7786-201ENSMUST00000210494 436 ntBASIC5.41□□□□□ -1.54
Sh3rf1Q69ZI1 Gm18587-201ENSMUST00000213736 841 ntBASIC5.41□□□□□ -1.54
Sh3rf1Q69ZI1 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC5.41□□□□□ -1.54
Sh3rf1Q69ZI1 AC183268.2-201ENSMUST00000214513 446 ntBASIC5.41□□□□□ -1.54
Sh3rf1Q69ZI1 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC5.41□□□□□ -1.54
Sh3rf1Q69ZI1 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC5.41□□□□□ -1.54
Sh3rf1Q69ZI1 AC122341.1-201ENSMUST00000227291 560 ntBASIC5.41□□□□□ -1.54
Sh3rf1Q69ZI1 AC170600.1-201ENSMUST00000228763 277 ntBASIC5.41□□□□□ -1.54
Sh3rf1Q69ZI1 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Sh3rf1Q69ZI1 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Sh3rf1Q69ZI1 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Sh3rf1Q69ZI1 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Sh3rf1Q69ZI1 Gm24622-201ENSMUST00000082619 162 ntBASIC5.41□□□□□ -1.54
Sh3rf1Q69ZI1 n-R5s173-201ENSMUST00000082620 119 ntBASIC5.41□□□□□ -1.54
Sh3rf1Q69ZI1 Gm25579-201ENSMUST00000083407 106 ntBASIC5.41□□□□□ -1.54
Sh3rf1Q69ZI1 Gm23733-201ENSMUST00000083750 106 ntBASIC5.41□□□□□ -1.54
Sh3rf1Q69ZI1 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Sh3rf1Q69ZI1 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Sh3rf1Q69ZI1 Gm37509-201ENSMUST00000194867 3169 ntBASIC5.41□□□□□ -1.54
Sh3rf1Q69ZI1 Olfr364-ps1-201ENSMUST00000104995 1766 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Sh3rf1Q69ZI1 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Sh3rf1Q69ZI1 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC5.41□□□□□ -1.54
Sh3rf1Q69ZI1 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Sh3rf1Q69ZI1 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Sh3rf1Q69ZI1 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Sh3rf1Q69ZI1 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC5.4□□□□□ -1.54
Sh3rf1Q69ZI1 AC153494.1-201ENSMUST00000218664 3041 ntBASIC5.4□□□□□ -1.54
Sh3rf1Q69ZI1 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Sh3rf1Q69ZI1 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Sh3rf1Q69ZI1 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
Sh3rf1Q69ZI1 Evi2-202ENSMUST00000170422 3944 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Sh3rf1Q69ZI1 Olfr133-203ENSMUST00000215078 3130 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Sh3rf1Q69ZI1 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms