Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm46996-201ENSMUST00000220924 408 ntBASIC5.74□□□□□ -1.49
Col6a1Q04857 AC117588.2-201ENSMUST00000228340 311 ntBASIC5.74□□□□□ -1.49
Col6a1Q04857 AC139350.4-201ENSMUST00000228483 798 ntBASIC5.74□□□□□ -1.49
Col6a1Q04857 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col6a1Q04857 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Col6a1Q04857 Gm23508-201ENSMUST00000083079 72 ntBASIC5.74□□□□□ -1.49
Col6a1Q04857 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Col6a1Q04857 Gm37018-201ENSMUST00000192441 3869 ntBASIC5.74□□□□□ -1.49
Col6a1Q04857 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
Col6a1Q04857 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC5.74□□□□□ -1.49
Col6a1Q04857 Gm38375-201ENSMUST00000194610 2227 ntBASIC5.74□□□□□ -1.49
Col6a1Q04857 Gm43924-201ENSMUST00000204851 1736 ntBASIC5.74□□□□□ -1.49
Col6a1Q04857 AC154184.1-201ENSMUST00000224375 1620 ntBASIC5.74□□□□□ -1.49
Col6a1Q04857 Gm38388-201ENSMUST00000195569 1430 ntBASIC5.74□□□□□ -1.49
Col6a1Q04857 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Col6a1Q04857 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC5.73□□□□□ -1.49
Col6a1Q04857 Gm43210-201ENSMUST00000196743 6152 ntBASIC5.73□□□□□ -1.49
Col6a1Q04857 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a1Q04857 AC162467.3-201ENSMUST00000219716 2172 ntBASIC5.73□□□□□ -1.49
Col6a1Q04857 Fam107b-209ENSMUST00000226435 3602 ntBASIC5.73□□□□□ -1.49
Col6a1Q04857 Gm44847-201ENSMUST00000207104 1991 ntBASIC5.73□□□□□ -1.49
Col6a1Q04857 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a1Q04857 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a1Q04857 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a1Q04857 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a1Q04857 Gm12854-201ENSMUST00000128518 297 ntBASIC5.73□□□□□ -1.49
Col6a1Q04857 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a1Q04857 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Col6a1Q04857 Gm28299-201ENSMUST00000189908 339 ntBASIC5.73□□□□□ -1.49
Col6a1Q04857 Gm29475-201ENSMUST00000190767 312 ntBASIC5.73□□□□□ -1.49
Col6a1Q04857 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC5.73□□□□□ -1.49
Col6a1Q04857 Gm43309-201ENSMUST00000200837 458 ntBASIC5.73□□□□□ -1.49
Col6a1Q04857 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC5.73□□□□□ -1.49
Col6a1Q04857 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
Col6a1Q04857 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a1Q04857 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC5.73□□□□□ -1.49
Col6a1Q04857 Gm9512-201ENSMUST00000223112 497 ntBASIC5.73□□□□□ -1.49
Col6a1Q04857 AC126690.1-201ENSMUST00000228898 397 ntBASIC5.73□□□□□ -1.49
Col6a1Q04857 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Col6a1Q04857 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a1Q04857 Gm7665-201ENSMUST00000076710 297 ntBASIC5.73□□□□□ -1.49
Col6a1Q04857 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Col6a1Q04857 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a1Q04857 Gm42496-201ENSMUST00000197976 3241 ntBASIC5.73□□□□□ -1.49
Col6a1Q04857 Gm37051-201ENSMUST00000194535 2943 ntBASIC5.73□□□□□ -1.49
Col6a1Q04857 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Col6a1Q04857 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a1Q04857 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a1Q04857 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Col6a1Q04857 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
Col6a1Q04857 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a1Q04857 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a1Q04857 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a1Q04857 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a1Q04857 Gm38351-201ENSMUST00000195466 2518 ntBASIC5.72□□□□□ -1.49
Col6a1Q04857 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Col6a1Q04857 Mir208b-201ENSMUST00000104735 77 ntBASIC5.72□□□□□ -1.49
Col6a1Q04857 Mir883a-201ENSMUST00000104824 76 ntBASIC5.72□□□□□ -1.49
Col6a1Q04857 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a1Q04857 Gm14558-201ENSMUST00000117458 381 ntBASIC5.72□□□□□ -1.49
Col6a1Q04857 Gm11784-201ENSMUST00000118568 474 ntBASIC5.72□□□□□ -1.49
Col6a1Q04857 Gm12422-201ENSMUST00000121431 302 ntBASIC5.72□□□□□ -1.49
Col6a1Q04857 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC5.72□□□□□ -1.49
Col6a1Q04857 Gm12110-201ENSMUST00000121601 579 ntBASIC5.72□□□□□ -1.49
Col6a1Q04857 Gm4487-201ENSMUST00000150617 442 ntBASIC5.72□□□□□ -1.49
Col6a1Q04857 Gm24477-201ENSMUST00000157438 103 ntBASIC5.72□□□□□ -1.49
Col6a1Q04857 Gm23993-201ENSMUST00000157478 144 ntBASIC5.72□□□□□ -1.49
Col6a1Q04857 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC5.72□□□□□ -1.49
Col6a1Q04857 Gm6872-201ENSMUST00000165001 700 ntBASIC5.72□□□□□ -1.49
Col6a1Q04857 Gm22851-201ENSMUST00000178741 94 ntBASIC5.72□□□□□ -1.49
Col6a1Q04857 Gm26556-201ENSMUST00000180645 320 ntBASIC5.72□□□□□ -1.49
Col6a1Q04857 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC5.72□□□□□ -1.49
Col6a1Q04857 Mir6238-201ENSMUST00000184140 129 ntBASIC5.72□□□□□ -1.49
Col6a1Q04857 Gm28974-201ENSMUST00000187893 231 ntBASIC5.72□□□□□ -1.49
Col6a1Q04857 Gm29540-201ENSMUST00000188207 337 ntTSL 3 BASIC5.72□□□□□ -1.49
Col6a1Q04857 Gm21088-201ENSMUST00000190875 316 ntBASIC5.72□□□□□ -1.49
Col6a1Q04857 Trav5d-2-201ENSMUST00000196107 275 ntBASIC5.72□□□□□ -1.49
Col6a1Q04857 Trav5n-2-201ENSMUST00000197136 275 ntBASIC5.72□□□□□ -1.49
Col6a1Q04857 Gm44002-201ENSMUST00000205134 594 ntBASIC5.72□□□□□ -1.49
Col6a1Q04857 Gm45209-201ENSMUST00000207122 353 ntBASIC5.72□□□□□ -1.49
Col6a1Q04857 AC135377.1-201ENSMUST00000223692 463 ntBASIC5.72□□□□□ -1.49
Col6a1Q04857 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a1Q04857 Gm24763-201ENSMUST00000083688 190 ntBASIC5.72□□□□□ -1.49
Col6a1Q04857 Gm24446-201ENSMUST00000083982 156 ntBASIC5.72□□□□□ -1.49
Col6a1Q04857 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Col6a1Q04857 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a1Q04857 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC5.72□□□□□ -1.49
Col6a1Q04857 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a1Q04857 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a1Q04857 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Col6a1Q04857 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC5.72□□□□□ -1.49
Col6a1Q04857 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a1Q04857 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
Col6a1Q04857 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
Col6a1Q04857 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Col6a1Q04857 Ezh1-201ENSMUST00000100417 3636 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Col6a1Q04857 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Col6a1Q04857 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Col6a1Q04857 Zfp11-201ENSMUST00000049778 3929 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col6a1Q04857 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 93.4 ms