Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm8600-201ENSMUST00000186320 905 ntBASIC3.1□□□□□ -1.91
Nkx3-1P97436 Gm29356-201ENSMUST00000186935 373 ntBASIC3.1□□□□□ -1.91
Nkx3-1P97436 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Nkx3-1P97436 Gm43155-201ENSMUST00000202661 494 ntBASIC3.1□□□□□ -1.91
Nkx3-1P97436 Gm44084-201ENSMUST00000203947 409 ntBASIC3.1□□□□□ -1.91
Nkx3-1P97436 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC3.1□□□□□ -1.91
Nkx3-1P97436 Gm44887-201ENSMUST00000208980 178 ntBASIC3.1□□□□□ -1.91
Nkx3-1P97436 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
Nkx3-1P97436 Gm17820-201ENSMUST00000220213 1068 ntBASIC3.1□□□□□ -1.91
Nkx3-1P97436 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC3.1□□□□□ -1.91
Nkx3-1P97436 AC158392.2-201ENSMUST00000225402 969 ntBASIC3.1□□□□□ -1.91
Nkx3-1P97436 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Nkx3-1P97436 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Nkx3-1P97436 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Nkx3-1P97436 Olfr1124-201ENSMUST00000062494 957 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Nkx3-1P97436 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Nkx3-1P97436 Olfr798-201ENSMUST00000079810 936 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Nkx3-1P97436 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Nkx3-1P97436 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
Nkx3-1P97436 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Nkx3-1P97436 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Nkx3-1P97436 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Nkx3-1P97436 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
Nkx3-1P97436 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Nkx3-1P97436 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
Nkx3-1P97436 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Nkx3-1P97436 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Nkx3-1P97436 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Nkx3-1P97436 Gm28240-201ENSMUST00000187560 2053 ntBASIC3.09□□□□□ -1.91
Nkx3-1P97436 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Nkx3-1P97436 Gm3683-201ENSMUST00000175701 2513 ntBASIC3.09□□□□□ -1.91
Nkx3-1P97436 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Nkx3-1P97436 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
Nkx3-1P97436 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
Nkx3-1P97436 Gm24831-201ENSMUST00000116778 126 ntBASIC3.09□□□□□ -1.91
Nkx3-1P97436 Gm14541-201ENSMUST00000118985 157 ntBASIC3.09□□□□□ -1.91
Nkx3-1P97436 Gm12118-201ENSMUST00000119766 532 ntBASIC3.09□□□□□ -1.91
Nkx3-1P97436 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC3.09□□□□□ -1.91
Nkx3-1P97436 Gm23229-201ENSMUST00000157297 105 ntBASIC3.09□□□□□ -1.91
Nkx3-1P97436 Gm22890-201ENSMUST00000158642 144 ntBASIC3.09□□□□□ -1.91
Nkx3-1P97436 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC3.09□□□□□ -1.91
Nkx3-1P97436 Gm8816-201ENSMUST00000182280 1163 ntBASIC3.09□□□□□ -1.91
Nkx3-1P97436 Gm27535-201ENSMUST00000183814 157 ntBASIC3.09□□□□□ -1.91
Nkx3-1P97436 Zfp-ps-201ENSMUST00000185025 478 ntBASIC3.09□□□□□ -1.91
Nkx3-1P97436 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC3.09□□□□□ -1.91
Nkx3-1P97436 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC3.09□□□□□ -1.91
Nkx3-1P97436 Gm44343-201ENSMUST00000196702 90 ntBASIC3.09□□□□□ -1.91
Nkx3-1P97436 Mir1892-201ENSMUST00000197752 80 ntBASIC3.09□□□□□ -1.91
Nkx3-1P97436 Gm44927-201ENSMUST00000207573 716 ntBASIC3.09□□□□□ -1.91
Nkx3-1P97436 Gm18194-201ENSMUST00000210455 481 ntBASIC3.09□□□□□ -1.91
Nkx3-1P97436 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC3.09□□□□□ -1.91
Nkx3-1P97436 AC159819.1-201ENSMUST00000213911 328 ntBASIC3.09□□□□□ -1.91
Nkx3-1P97436 AC161054.1-201ENSMUST00000214319 184 ntBASIC3.09□□□□□ -1.91
Nkx3-1P97436 Olfr790-204ENSMUST00000218901 1070 ntBASIC3.09□□□□□ -1.91
Nkx3-1P97436 Gm18387-201ENSMUST00000220333 702 ntBASIC3.09□□□□□ -1.91
Nkx3-1P97436 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC3.09□□□□□ -1.91
Nkx3-1P97436 CT010506.3-201ENSMUST00000223699 410 ntBASIC3.09□□□□□ -1.91
Nkx3-1P97436 AC124489.2-201ENSMUST00000223930 589 ntBASIC3.09□□□□□ -1.91
Nkx3-1P97436 Olfr790-201ENSMUST00000056002 1070 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Nkx3-1P97436 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
Nkx3-1P97436 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Nkx3-1P97436 Gm23677-201ENSMUST00000083156 104 ntBASIC3.09□□□□□ -1.91
Nkx3-1P97436 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC3.09□□□□□ -1.91
Nkx3-1P97436 Gm37298-201ENSMUST00000193770 3868 ntBASIC3.09□□□□□ -1.91
Nkx3-1P97436 Epyc-201ENSMUST00000020094 1723 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Nkx3-1P97436 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Nkx3-1P97436 Gm37887-201ENSMUST00000192752 2716 ntBASIC3.09□□□□□ -1.92
Nkx3-1P97436 Gm15773-201ENSMUST00000118665 1448 ntBASIC3.09□□□□□ -1.92
Nkx3-1P97436 AC161254.1-201ENSMUST00000220310 3842 ntBASIC3.09□□□□□ -1.92
Nkx3-1P97436 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
Nkx3-1P97436 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.92
Nkx3-1P97436 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
Nkx3-1P97436 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Nkx3-1P97436 Gm36969-201ENSMUST00000194551 2809 ntBASIC3.08□□□□□ -1.92
Nkx3-1P97436 AC151831.1-201ENSMUST00000227609 4033 ntBASIC3.08□□□□□ -1.92
Nkx3-1P97436 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Nkx3-1P97436 Gm44800-201ENSMUST00000207510 1855 ntBASIC3.08□□□□□ -1.92
Nkx3-1P97436 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
Nkx3-1P97436 Gm14973-201ENSMUST00000117248 255 ntBASIC3.08□□□□□ -1.92
Nkx3-1P97436 Gm11923-201ENSMUST00000118135 508 ntBASIC3.08□□□□□ -1.92
Nkx3-1P97436 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
Nkx3-1P97436 Gm11913-201ENSMUST00000119094 336 ntBASIC3.08□□□□□ -1.92
Nkx3-1P97436 Gm11746-201ENSMUST00000119843 821 ntBASIC3.08□□□□□ -1.92
Nkx3-1P97436 Gm14534-201ENSMUST00000120045 357 ntBASIC3.08□□□□□ -1.92
Nkx3-1P97436 Gm13419-201ENSMUST00000121711 271 ntBASIC3.08□□□□□ -1.92
Nkx3-1P97436 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Nkx3-1P97436 Gm8988-201ENSMUST00000155015 1240 ntBASIC3.08□□□□□ -1.92
Nkx3-1P97436 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC3.08□□□□□ -1.92
Nkx3-1P97436 Gm25066-201ENSMUST00000158145 123 ntBASIC3.08□□□□□ -1.92
Nkx3-1P97436 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC3.08□□□□□ -1.92
Nkx3-1P97436 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC3.08□□□□□ -1.92
Nkx3-1P97436 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
Nkx3-1P97436 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Nkx3-1P97436 Gm28655-201ENSMUST00000191538 692 ntBASIC3.08□□□□□ -1.92
Nkx3-1P97436 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC3.08□□□□□ -1.92
Nkx3-1P97436 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Nkx3-1P97436 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Nkx3-1P97436 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC3.08□□□□□ -1.92
Nkx3-1P97436 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Nkx3-1P97436 AC107864.1-201ENSMUST00000217937 496 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms