Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC3.5□□□□□ -1.85
Nkx2-1P50220 Gm12685-201ENSMUST00000121702 214 ntBASIC3.5□□□□□ -1.85
Nkx2-1P50220 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC3.5□□□□□ -1.85
Nkx2-1P50220 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Nkx2-1P50220 Gm2966-201ENSMUST00000166052 481 ntBASIC3.5□□□□□ -1.85
Nkx2-1P50220 Gm3851-201ENSMUST00000168653 318 ntBASIC3.5□□□□□ -1.85
Nkx2-1P50220 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC3.5□□□□□ -1.85
Nkx2-1P50220 Gm21960-201ENSMUST00000181924 452 ntBASIC3.5□□□□□ -1.85
Nkx2-1P50220 Mir6971-201ENSMUST00000183497 63 ntBASIC3.5□□□□□ -1.85
Nkx2-1P50220 Mir6401-201ENSMUST00000184499 109 ntBASIC3.5□□□□□ -1.85
Nkx2-1P50220 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Nkx2-1P50220 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC3.5□□□□□ -1.85
Nkx2-1P50220 Gm28500-201ENSMUST00000190286 151 ntBASIC3.5□□□□□ -1.85
Nkx2-1P50220 Gm28655-201ENSMUST00000191538 692 ntBASIC3.5□□□□□ -1.85
Nkx2-1P50220 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC3.5□□□□□ -1.85
Nkx2-1P50220 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC3.5□□□□□ -1.85
Nkx2-1P50220 Gm43524-201ENSMUST00000197278 298 ntBASIC3.5□□□□□ -1.85
Nkx2-1P50220 Gm43848-201ENSMUST00000198060 1247 ntBASIC3.5□□□□□ -1.85
Nkx2-1P50220 Ighv1-79-201ENSMUST00000200152 350 ntBASIC3.5□□□□□ -1.85
Nkx2-1P50220 Gm44348-201ENSMUST00000200165 122 ntBASIC3.5□□□□□ -1.85
Nkx2-1P50220 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Nkx2-1P50220 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC3.5□□□□□ -1.85
Nkx2-1P50220 AC153526.1-201ENSMUST00000219750 190 ntBASIC3.5□□□□□ -1.85
Nkx2-1P50220 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC3.5□□□□□ -1.85
Nkx2-1P50220 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC3.5□□□□□ -1.85
Nkx2-1P50220 AC160958.1-201ENSMUST00000224833 368 ntBASIC3.5□□□□□ -1.85
Nkx2-1P50220 AC124569.1-201ENSMUST00000225932 101 ntBASIC3.5□□□□□ -1.85
Nkx2-1P50220 Vmn1r89-206ENSMUST00000227319 985 ntBASIC3.5□□□□□ -1.85
Nkx2-1P50220 AC154419.1-201ENSMUST00000227627 272 ntBASIC3.5□□□□□ -1.85
Nkx2-1P50220 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC3.5□□□□□ -1.85
Nkx2-1P50220 Gm26439-201ENSMUST00000082592 106 ntBASIC3.5□□□□□ -1.85
Nkx2-1P50220 Gm23875-201ENSMUST00000083711 318 ntBASIC3.5□□□□□ -1.85
Nkx2-1P50220 Gm22864-201ENSMUST00000083950 130 ntBASIC3.5□□□□□ -1.85
Nkx2-1P50220 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Nkx2-1P50220 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC3.5□□□□□ -1.85
Nkx2-1P50220 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Nkx2-1P50220 AC154329.1-201ENSMUST00000224408 3129 ntBASIC3.5□□□□□ -1.85
Nkx2-1P50220 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Nkx2-1P50220 AC120153.1-201ENSMUST00000226502 1311 ntBASIC3.49□□□□□ -1.85
Nkx2-1P50220 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
Nkx2-1P50220 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Nkx2-1P50220 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Nkx2-1P50220 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
Nkx2-1P50220 Gm11432-201ENSMUST00000117334 231 ntBASIC3.49□□□□□ -1.85
Nkx2-1P50220 Xlr5d-ps-201ENSMUST00000117501 782 ntBASIC3.49□□□□□ -1.85
Nkx2-1P50220 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC3.49□□□□□ -1.85
Nkx2-1P50220 Gm9078-201ENSMUST00000119126 617 ntBASIC3.49□□□□□ -1.85
Nkx2-1P50220 Gm12294-201ENSMUST00000119723 490 ntBASIC3.49□□□□□ -1.85
Nkx2-1P50220 Gm12495-201ENSMUST00000119750 447 ntBASIC3.49□□□□□ -1.85
Nkx2-1P50220 Gm25102-201ENSMUST00000122479 112 ntBASIC3.49□□□□□ -1.85
Nkx2-1P50220 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
Nkx2-1P50220 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Nkx2-1P50220 Gm5353-201ENSMUST00000139800 793 ntBASIC3.49□□□□□ -1.85
Nkx2-1P50220 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
Nkx2-1P50220 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Nkx2-1P50220 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC3.49□□□□□ -1.85
Nkx2-1P50220 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Nkx2-1P50220 Gm25456-201ENSMUST00000157952 109 ntBASIC3.49□□□□□ -1.85
Nkx2-1P50220 Gm26034-201ENSMUST00000158154 116 ntBASIC3.49□□□□□ -1.85
Nkx2-1P50220 Gm23385-201ENSMUST00000158592 295 ntBASIC3.49□□□□□ -1.85
Nkx2-1P50220 Gm19807-201ENSMUST00000173971 667 ntBASIC3.49□□□□□ -1.85
Nkx2-1P50220 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC3.49□□□□□ -1.85
Nkx2-1P50220 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC3.49□□□□□ -1.85
Nkx2-1P50220 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
Nkx2-1P50220 Gm24925-201ENSMUST00000178157 107 ntBASIC3.49□□□□□ -1.85
Nkx2-1P50220 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
Nkx2-1P50220 Gm7094-201ENSMUST00000178379 366 ntBASIC3.49□□□□□ -1.85
Nkx2-1P50220 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Nkx2-1P50220 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Nkx2-1P50220 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Nkx2-1P50220 Gm28976-201ENSMUST00000188070 144 ntBASIC3.49□□□□□ -1.85
Nkx2-1P50220 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC3.49□□□□□ -1.85
Nkx2-1P50220 Gm37111-201ENSMUST00000193250 634 ntBASIC3.49□□□□□ -1.85
Nkx2-1P50220 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC3.49□□□□□ -1.85
Nkx2-1P50220 Gm18850-201ENSMUST00000211578 388 ntBASIC3.49□□□□□ -1.85
Nkx2-1P50220 Gm2607-201ENSMUST00000212389 627 ntBASIC3.49□□□□□ -1.85
Nkx2-1P50220 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Nkx2-1P50220 AC113305.1-201ENSMUST00000214664 724 ntBASIC3.49□□□□□ -1.85
Nkx2-1P50220 Gm18016-201ENSMUST00000216119 801 ntBASIC3.49□□□□□ -1.85
Nkx2-1P50220 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC3.49□□□□□ -1.85
Nkx2-1P50220 Gm46190-201ENSMUST00000219650 427 ntBASIC3.49□□□□□ -1.85
Nkx2-1P50220 AC211878.2-201ENSMUST00000222486 488 ntBASIC3.49□□□□□ -1.85
Nkx2-1P50220 AC167192.4-201ENSMUST00000224087 993 ntBASIC3.49□□□□□ -1.85
Nkx2-1P50220 AC139750.2-201ENSMUST00000224424 386 ntBASIC3.49□□□□□ -1.85
Nkx2-1P50220 CT010505.1-201ENSMUST00000227026 396 ntBASIC3.49□□□□□ -1.85
Nkx2-1P50220 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Nkx2-1P50220 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Nkx2-1P50220 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Nkx2-1P50220 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Nkx2-1P50220 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC3.49□□□□□ -1.85
Nkx2-1P50220 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Nkx2-1P50220 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
Nkx2-1P50220 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
Nkx2-1P50220 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC3.49□□□□□ -1.85
Nkx2-1P50220 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Nkx2-1P50220 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Nkx2-1P50220 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Nkx2-1P50220 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
Nkx2-1P50220 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Nkx2-1P50220 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms