Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC3.83□□□□□ -1.8
Col2a1P28481 Gm37676-201ENSMUST00000195496 507 ntBASIC3.83□□□□□ -1.8
Col2a1P28481 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC3.83□□□□□ -1.8
Col2a1P28481 Olfr1476-ps1-201ENSMUST00000208572 367 ntBASIC3.83□□□□□ -1.8
Col2a1P28481 Gm45072-201ENSMUST00000208673 929 ntBASIC3.83□□□□□ -1.8
Col2a1P28481 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC3.83□□□□□ -1.8
Col2a1P28481 Gm45554-202ENSMUST00000210964 1090 ntTSL 5 BASIC3.83□□□□□ -1.8
Col2a1P28481 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC3.83□□□□□ -1.8
Col2a1P28481 Gm26449-201ENSMUST00000082452 104 ntBASIC3.83□□□□□ -1.8
Col2a1P28481 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Col2a1P28481 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Col2a1P28481 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Col2a1P28481 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC3.82□□□□□ -1.8
Col2a1P28481 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Col2a1P28481 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Col2a1P28481 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Col2a1P28481 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
Col2a1P28481 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
Col2a1P28481 Gm25308-201ENSMUST00000104171 158 ntBASIC3.82□□□□□ -1.8
Col2a1P28481 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Col2a1P28481 Gm13761-201ENSMUST00000117238 807 ntBASIC3.82□□□□□ -1.8
Col2a1P28481 Gm11576-201ENSMUST00000117433 417 ntBASIC3.82□□□□□ -1.8
Col2a1P28481 Gm15493-201ENSMUST00000119461 528 ntBASIC3.82□□□□□ -1.8
Col2a1P28481 Gm15367-201ENSMUST00000122398 1016 ntBASIC3.82□□□□□ -1.8
Col2a1P28481 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC3.82□□□□□ -1.8
Col2a1P28481 Gm27783-201ENSMUST00000183534 105 ntBASIC3.82□□□□□ -1.8
Col2a1P28481 Gm27538-201ENSMUST00000185065 294 ntBASIC3.82□□□□□ -1.8
Col2a1P28481 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.82□□□□□ -1.8
Col2a1P28481 Olfr1228-201ENSMUST00000190757 1094 ntAPPRIS P2 BASIC3.82□□□□□ -1.8
Col2a1P28481 Gm18384-201ENSMUST00000195974 808 ntBASIC3.82□□□□□ -1.8
Col2a1P28481 Gm9023-201ENSMUST00000198408 1038 ntBASIC3.82□□□□□ -1.8
Col2a1P28481 Gm44548-201ENSMUST00000208929 192 ntBASIC3.82□□□□□ -1.8
Col2a1P28481 AC093926.1-201ENSMUST00000213730 243 ntBASIC3.82□□□□□ -1.8
Col2a1P28481 AC107757.3-201ENSMUST00000226312 535 ntBASIC3.82□□□□□ -1.8
Col2a1P28481 Gm26129-201ENSMUST00000082719 107 ntBASIC3.82□□□□□ -1.8
Col2a1P28481 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Col2a1P28481 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Col2a1P28481 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC3.81□□□□□ -1.8
Col2a1P28481 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Col2a1P28481 Gm22750-201ENSMUST00000102076 103 ntBASIC3.81□□□□□ -1.8
Col2a1P28481 Gm12568-201ENSMUST00000117362 624 ntBASIC3.81□□□□□ -1.8
Col2a1P28481 Gm12261-201ENSMUST00000117499 645 ntBASIC3.81□□□□□ -1.8
Col2a1P28481 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC3.81□□□□□ -1.8
Col2a1P28481 Gm14659-201ENSMUST00000117667 843 ntBASIC3.81□□□□□ -1.8
Col2a1P28481 Gm13379-201ENSMUST00000118053 621 ntBASIC3.81□□□□□ -1.8
Col2a1P28481 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC3.81□□□□□ -1.8
Col2a1P28481 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC3.81□□□□□ -1.8
Col2a1P28481 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Col2a1P28481 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Col2a1P28481 Gm10075-201ENSMUST00000162030 545 ntBASIC3.81□□□□□ -1.8
Col2a1P28481 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC3.81□□□□□ -1.8
Col2a1P28481 Gm5527-201ENSMUST00000179821 642 ntBASIC3.81□□□□□ -1.8
Col2a1P28481 Gm37629-201ENSMUST00000193635 1050 ntBASIC3.81□□□□□ -1.8
Col2a1P28481 Gm37288-201ENSMUST00000193963 334 ntBASIC3.81□□□□□ -1.8
Col2a1P28481 Gm43316-201ENSMUST00000197252 1295 ntBASIC3.81□□□□□ -1.8
Col2a1P28481 Gm19726-201ENSMUST00000205008 240 ntBASIC3.81□□□□□ -1.8
Col2a1P28481 Gm8319-201ENSMUST00000205708 641 ntBASIC3.81□□□□□ -1.8
Col2a1P28481 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC3.81□□□□□ -1.8
Col2a1P28481 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Col2a1P28481 AC158142.3-201ENSMUST00000226230 675 ntBASIC3.81□□□□□ -1.8
Col2a1P28481 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC3.81□□□□□ -1.8
Col2a1P28481 Tmem69-201ENSMUST00000069674 974 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
Col2a1P28481 Olfr512-201ENSMUST00000074730 1056 ntBASIC3.81□□□□□ -1.8
Col2a1P28481 Snora31-201ENSMUST00000083213 130 ntBASIC3.81□□□□□ -1.8
Col2a1P28481 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Col2a1P28481 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Col2a1P28481 AC135119.1-201ENSMUST00000227935 3717 ntBASIC3.81□□□□□ -1.8
Col2a1P28481 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.81□□□□□ -1.8
Col2a1P28481 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
Col2a1P28481 Gm43009-201ENSMUST00000199979 3566 ntBASIC3.81□□□□□ -1.8
Col2a1P28481 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Col2a1P28481 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Col2a1P28481 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Col2a1P28481 Gm18719-201ENSMUST00000196696 1413 ntBASIC3.81□□□□□ -1.8
Col2a1P28481 Gm14987-201ENSMUST00000117820 676 ntBASIC3.8□□□□□ -1.8
Col2a1P28481 Gm12387-201ENSMUST00000118573 955 ntBASIC3.8□□□□□ -1.8
Col2a1P28481 Gm13064-201ENSMUST00000119125 557 ntBASIC3.8□□□□□ -1.8
Col2a1P28481 Gm8840-201ENSMUST00000122454 386 ntBASIC3.8□□□□□ -1.8
Col2a1P28481 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC3.8□□□□□ -1.8
Col2a1P28481 Gm22322-201ENSMUST00000157151 111 ntBASIC3.8□□□□□ -1.8
Col2a1P28481 Gm23855-201ENSMUST00000158377 135 ntBASIC3.8□□□□□ -1.8
Col2a1P28481 Gm18560-201ENSMUST00000173463 1123 ntBASIC3.8□□□□□ -1.8
Col2a1P28481 Gm28439-201ENSMUST00000187714 876 ntBASIC3.8□□□□□ -1.8
Col2a1P28481 Gm18433-202ENSMUST00000195682 196 ntBASIC3.8□□□□□ -1.8
Col2a1P28481 Igkv9-128-201ENSMUST00000196602 353 ntBASIC3.8□□□□□ -1.8
Col2a1P28481 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC3.8□□□□□ -1.8
Col2a1P28481 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC3.8□□□□□ -1.8
Col2a1P28481 Olfr266-201ENSMUST00000059486 1027 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Col2a1P28481 Gm10242-201ENSMUST00000090064 330 ntBASIC3.8□□□□□ -1.8
Col2a1P28481 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Col2a1P28481 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Col2a1P28481 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Col2a1P28481 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
Col2a1P28481 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Col2a1P28481 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Col2a1P28481 Gm13167-201ENSMUST00000118554 578 ntBASIC3.79□□□□□ -1.8
Col2a1P28481 Gm13487-201ENSMUST00000122240 864 ntBASIC3.79□□□□□ -1.8
Col2a1P28481 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC3.79□□□□□ -1.8
Col2a1P28481 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
Col2a1P28481 Gm27893-201ENSMUST00000184408 194 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms