Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Gm25205-201ENSMUST00000082841 103 ntBASIC2.34□□□□□ -2.03
Trav8-1A0A075B641 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Trav8-1A0A075B641 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
Trav8-1A0A075B641 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
Trav8-1A0A075B641 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
Trav8-1A0A075B641 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
Trav8-1A0A075B641 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
Trav8-1A0A075B641 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
Trav8-1A0A075B641 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Trav8-1A0A075B641 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Trav8-1A0A075B641 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
Trav8-1A0A075B641 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Trav8-1A0A075B641 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Trav8-1A0A075B641 Gm5762-201ENSMUST00000119204 258 ntBASIC2.33□□□□□ -2.04
Trav8-1A0A075B641 Gm16005-201ENSMUST00000120515 269 ntBASIC2.33□□□□□ -2.04
Trav8-1A0A075B641 Gm14776-201ENSMUST00000121029 887 ntBASIC2.33□□□□□ -2.04
Trav8-1A0A075B641 Gm12222-201ENSMUST00000121368 260 ntBASIC2.33□□□□□ -2.04
Trav8-1A0A075B641 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC2.33□□□□□ -2.04
Trav8-1A0A075B641 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Trav8-1A0A075B641 Gm22034-201ENSMUST00000157283 134 ntBASIC2.33□□□□□ -2.04
Trav8-1A0A075B641 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC2.33□□□□□ -2.04
Trav8-1A0A075B641 Gm25025-201ENSMUST00000175018 111 ntBASIC2.33□□□□□ -2.04
Trav8-1A0A075B641 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC2.33□□□□□ -2.04
Trav8-1A0A075B641 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC2.33□□□□□ -2.04
Trav8-1A0A075B641 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Trav8-1A0A075B641 Gm38201-201ENSMUST00000192143 387 ntBASIC2.33□□□□□ -2.04
Trav8-1A0A075B641 Gm42926-201ENSMUST00000200496 697 ntBASIC2.33□□□□□ -2.04
Trav8-1A0A075B641 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC2.33□□□□□ -2.04
Trav8-1A0A075B641 Gm3213-201ENSMUST00000219296 441 ntBASIC2.33□□□□□ -2.04
Trav8-1A0A075B641 AC160984.2-201ENSMUST00000224927 791 ntBASIC2.33□□□□□ -2.04
Trav8-1A0A075B641 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Trav8-1A0A075B641 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Trav8-1A0A075B641 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Trav8-1A0A075B641 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
Trav8-1A0A075B641 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Trav8-1A0A075B641 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC2.33□□□□□ -2.04
Trav8-1A0A075B641 Gm37674-201ENSMUST00000194177 1834 ntBASIC2.33□□□□□ -2.04
Trav8-1A0A075B641 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Trav8-1A0A075B641 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC2.32□□□□□ -2.04
Trav8-1A0A075B641 AC152159.1-201ENSMUST00000226719 2769 ntBASIC2.32□□□□□ -2.04
Trav8-1A0A075B641 AC158979.1-201ENSMUST00000223594 2252 ntBASIC2.32□□□□□ -2.04
Trav8-1A0A075B641 Gm24273-201ENSMUST00000102332 164 ntBASIC2.32□□□□□ -2.04
Trav8-1A0A075B641 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Trav8-1A0A075B641 Gm24469-201ENSMUST00000104487 131 ntBASIC2.32□□□□□ -2.04
Trav8-1A0A075B641 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Trav8-1A0A075B641 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
Trav8-1A0A075B641 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Trav8-1A0A075B641 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC2.32□□□□□ -2.04
Trav8-1A0A075B641 Gm12568-201ENSMUST00000117362 624 ntBASIC2.32□□□□□ -2.04
Trav8-1A0A075B641 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC2.32□□□□□ -2.04
Trav8-1A0A075B641 Gm13379-201ENSMUST00000118053 621 ntBASIC2.32□□□□□ -2.04
Trav8-1A0A075B641 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC2.32□□□□□ -2.04
Trav8-1A0A075B641 Gm11253-201ENSMUST00000118486 201 ntBASIC2.32□□□□□ -2.04
Trav8-1A0A075B641 Gm11866-201ENSMUST00000120209 335 ntBASIC2.32□□□□□ -2.04
Trav8-1A0A075B641 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC2.32□□□□□ -2.04
Trav8-1A0A075B641 Gm11506-201ENSMUST00000122414 470 ntBASIC2.32□□□□□ -2.04
Trav8-1A0A075B641 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC2.32□□□□□ -2.04
Trav8-1A0A075B641 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC2.32□□□□□ -2.04
Trav8-1A0A075B641 Gm23782-201ENSMUST00000157939 120 ntBASIC2.32□□□□□ -2.04
Trav8-1A0A075B641 Gm23023-201ENSMUST00000158767 109 ntBASIC2.32□□□□□ -2.04
Trav8-1A0A075B641 Gm22531-201ENSMUST00000158819 140 ntBASIC2.32□□□□□ -2.04
Trav8-1A0A075B641 Gm16290-201ENSMUST00000161175 474 ntBASIC2.32□□□□□ -2.04
Trav8-1A0A075B641 Gm10075-201ENSMUST00000162030 545 ntBASIC2.32□□□□□ -2.04
Trav8-1A0A075B641 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC2.32□□□□□ -2.04
Trav8-1A0A075B641 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC2.32□□□□□ -2.04
Trav8-1A0A075B641 Gm26988-201ENSMUST00000183296 945 ntBASIC2.32□□□□□ -2.04
Trav8-1A0A075B641 Gm27875-201ENSMUST00000184425 123 ntBASIC2.32□□□□□ -2.04
Trav8-1A0A075B641 Gm29356-201ENSMUST00000186935 373 ntBASIC2.32□□□□□ -2.04
Trav8-1A0A075B641 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Trav8-1A0A075B641 Gm37164-201ENSMUST00000192809 637 ntBASIC2.32□□□□□ -2.04
Trav8-1A0A075B641 Trbv8-201ENSMUST00000194020 285 ntBASIC2.32□□□□□ -2.04
Trav8-1A0A075B641 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Trav8-1A0A075B641 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC2.32□□□□□ -2.04
Trav8-1A0A075B641 Gm44952-201ENSMUST00000204443 433 ntBASIC2.32□□□□□ -2.04
Trav8-1A0A075B641 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC2.32□□□□□ -2.04
Trav8-1A0A075B641 Gm45038-201ENSMUST00000207537 3838 ntBASIC2.32□□□□□ -2.04
Trav8-1A0A075B641 Gm44852-201ENSMUST00000207950 369 ntBASIC2.32□□□□□ -2.04
Trav8-1A0A075B641 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC2.32□□□□□ -2.04
Trav8-1A0A075B641 Gm39147-201ENSMUST00000211376 465 ntBASIC2.32□□□□□ -2.04
Trav8-1A0A075B641 Gm18585-201ENSMUST00000215197 556 ntBASIC2.32□□□□□ -2.04
Trav8-1A0A075B641 Gm18016-201ENSMUST00000216119 801 ntBASIC2.32□□□□□ -2.04
Trav8-1A0A075B641 AC134596.2-201ENSMUST00000222158 171 ntBASIC2.32□□□□□ -2.04
Trav8-1A0A075B641 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Trav8-1A0A075B641 AC156559.1-201ENSMUST00000224158 222 ntBASIC2.32□□□□□ -2.04
Trav8-1A0A075B641 Olfr998-201ENSMUST00000052307 1012 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Trav8-1A0A075B641 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Trav8-1A0A075B641 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Trav8-1A0A075B641 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC2.32□□□□□ -2.04
Trav8-1A0A075B641 Gm10237-201ENSMUST00000078393 273 ntBASIC2.32□□□□□ -2.04
Trav8-1A0A075B641 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
Trav8-1A0A075B641 Olfr1066-201ENSMUST00000099885 942 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Trav8-1A0A075B641 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Trav8-1A0A075B641 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
Trav8-1A0A075B641 Gm43736-201ENSMUST00000196377 2281 ntBASIC2.31□□□□□ -2.04
Trav8-1A0A075B641 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC2.31□□□□□ -2.04
Trav8-1A0A075B641 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC2.31□□□□□ -2.04
Trav8-1A0A075B641 Gm42768-201ENSMUST00000197734 2897 ntBASIC2.31□□□□□ -2.04
Trav8-1A0A075B641 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Trav8-1A0A075B641 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Trav8-1A0A075B641 Gm14253-201ENSMUST00000122112 639 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms