Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gm44321-201ENSMUST00000204262 2855 ntBASIC4.21□□□□□ -1.73
H2afb3S4R1G7 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
H2afb3S4R1G7 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
H2afb3S4R1G7 Gm14163-201ENSMUST00000117342 217 ntBASIC4.21□□□□□ -1.74
H2afb3S4R1G7 Gm11822-201ENSMUST00000119177 415 ntBASIC4.21□□□□□ -1.74
H2afb3S4R1G7 Mup-ps17-201ENSMUST00000120723 218 ntBASIC4.21□□□□□ -1.74
H2afb3S4R1G7 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC4.21□□□□□ -1.74
H2afb3S4R1G7 Gm13232-201ENSMUST00000121816 632 ntBASIC4.21□□□□□ -1.74
H2afb3S4R1G7 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC4.21□□□□□ -1.74
H2afb3S4R1G7 Gm11197-201ENSMUST00000145158 839 ntBASIC4.21□□□□□ -1.74
H2afb3S4R1G7 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
H2afb3S4R1G7 Gm26347-201ENSMUST00000157526 131 ntBASIC4.21□□□□□ -1.74
H2afb3S4R1G7 Gm23534-201ENSMUST00000157539 97 ntBASIC4.21□□□□□ -1.74
H2afb3S4R1G7 Gm22076-201ENSMUST00000158601 84 ntBASIC4.21□□□□□ -1.74
H2afb3S4R1G7 Gm16134-201ENSMUST00000161714 336 ntBASIC4.21□□□□□ -1.74
H2afb3S4R1G7 Gm8224-201ENSMUST00000166178 497 ntBASIC4.21□□□□□ -1.74
H2afb3S4R1G7 Gm18522-201ENSMUST00000173947 650 ntBASIC4.21□□□□□ -1.74
H2afb3S4R1G7 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
H2afb3S4R1G7 Gm22859-201ENSMUST00000174978 122 ntBASIC4.21□□□□□ -1.74
H2afb3S4R1G7 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC4.21□□□□□ -1.74
H2afb3S4R1G7 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
H2afb3S4R1G7 Gm18036-201ENSMUST00000195256 272 ntBASIC4.21□□□□□ -1.74
H2afb3S4R1G7 Gm36953-201ENSMUST00000195295 268 ntBASIC4.21□□□□□ -1.74
H2afb3S4R1G7 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC4.21□□□□□ -1.74
H2afb3S4R1G7 Gm22897-201ENSMUST00000197860 128 ntBASIC4.21□□□□□ -1.74
H2afb3S4R1G7 Gm18452-201ENSMUST00000202968 1111 ntBASIC4.21□□□□□ -1.74
H2afb3S4R1G7 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC4.21□□□□□ -1.74
H2afb3S4R1G7 Gm33601-201ENSMUST00000210001 961 ntBASIC4.21□□□□□ -1.74
H2afb3S4R1G7 Gm45690-201ENSMUST00000210775 246 ntBASIC4.21□□□□□ -1.74
H2afb3S4R1G7 Gm7495-201ENSMUST00000215099 426 ntBASIC4.21□□□□□ -1.74
H2afb3S4R1G7 AC153924.1-201ENSMUST00000220117 312 ntBASIC4.21□□□□□ -1.74
H2afb3S4R1G7 Gm46994-201ENSMUST00000221523 219 ntBASIC4.21□□□□□ -1.74
H2afb3S4R1G7 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
H2afb3S4R1G7 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
H2afb3S4R1G7 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
H2afb3S4R1G7 Gm23300-201ENSMUST00000082712 125 ntBASIC4.21□□□□□ -1.74
H2afb3S4R1G7 n-R5s152-201ENSMUST00000093641 119 ntBASIC4.21□□□□□ -1.74
H2afb3S4R1G7 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
H2afb3S4R1G7 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
H2afb3S4R1G7 AC154511.1-201ENSMUST00000222578 1587 ntBASIC4.21□□□□□ -1.74
H2afb3S4R1G7 AC164297.6-201ENSMUST00000224643 1568 ntBASIC4.21□□□□□ -1.74
H2afb3S4R1G7 AC115891.1-201ENSMUST00000215798 1755 ntBASIC4.21□□□□□ -1.74
H2afb3S4R1G7 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
H2afb3S4R1G7 Gm37099-201ENSMUST00000191902 3451 ntBASIC4.21□□□□□ -1.74
H2afb3S4R1G7 Gm8995-201ENSMUST00000184842 7280 ntBASIC4.21□□□□□ -1.74
H2afb3S4R1G7 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
H2afb3S4R1G7 Olfr491-202ENSMUST00000209545 1944 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
H2afb3S4R1G7 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC4.21□□□□□ -1.74
H2afb3S4R1G7 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
H2afb3S4R1G7 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
H2afb3S4R1G7 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
H2afb3S4R1G7 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
H2afb3S4R1G7 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
H2afb3S4R1G7 E430024I08Rik-208ENSMUST00000223312 1573 ntTSL 5 BASIC4.2□□□□□ -1.74
H2afb3S4R1G7 Plch1-209ENSMUST00000161052 1472 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
H2afb3S4R1G7 Gm14793-201ENSMUST00000118739 311 ntBASIC4.2□□□□□ -1.74
H2afb3S4R1G7 Gm6587-201ENSMUST00000120219 613 ntBASIC4.2□□□□□ -1.74
H2afb3S4R1G7 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC4.2□□□□□ -1.74
H2afb3S4R1G7 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC4.2□□□□□ -1.74
H2afb3S4R1G7 Gm7855-201ENSMUST00000137737 687 ntBASIC4.2□□□□□ -1.74
H2afb3S4R1G7 Gm2343-201ENSMUST00000161177 1042 ntBASIC4.2□□□□□ -1.74
H2afb3S4R1G7 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
H2afb3S4R1G7 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
H2afb3S4R1G7 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
H2afb3S4R1G7 Gm9613-201ENSMUST00000171662 196 ntBASIC4.2□□□□□ -1.74
H2afb3S4R1G7 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC4.2□□□□□ -1.74
H2afb3S4R1G7 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC4.2□□□□□ -1.74
H2afb3S4R1G7 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
H2afb3S4R1G7 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
H2afb3S4R1G7 Mir6343-201ENSMUST00000183584 84 ntBASIC4.2□□□□□ -1.74
H2afb3S4R1G7 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC4.2□□□□□ -1.74
H2afb3S4R1G7 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC4.2□□□□□ -1.74
H2afb3S4R1G7 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC4.2□□□□□ -1.74
H2afb3S4R1G7 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
H2afb3S4R1G7 Gm29552-201ENSMUST00000190548 660 ntBASIC4.2□□□□□ -1.74
H2afb3S4R1G7 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC4.2□□□□□ -1.74
H2afb3S4R1G7 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC4.2□□□□□ -1.74
H2afb3S4R1G7 Gm38234-201ENSMUST00000195204 421 ntBASIC4.2□□□□□ -1.74
H2afb3S4R1G7 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC4.2□□□□□ -1.74
H2afb3S4R1G7 Gm43828-201ENSMUST00000196890 639 ntBASIC4.2□□□□□ -1.74
H2afb3S4R1G7 Gm43070-201ENSMUST00000196938 415 ntBASIC4.2□□□□□ -1.74
H2afb3S4R1G7 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC4.2□□□□□ -1.74
H2afb3S4R1G7 AC161520.1-201ENSMUST00000210954 939 ntBASIC4.2□□□□□ -1.74
H2afb3S4R1G7 AC116589.1-201ENSMUST00000220634 327 ntBASIC4.2□□□□□ -1.74
H2afb3S4R1G7 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC4.2□□□□□ -1.74
H2afb3S4R1G7 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC4.2□□□□□ -1.74
H2afb3S4R1G7 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
H2afb3S4R1G7 AC192334.2-201ENSMUST00000223087 1091 ntBASIC4.2□□□□□ -1.74
H2afb3S4R1G7 AC154623.1-201ENSMUST00000224348 805 ntBASIC4.2□□□□□ -1.74
H2afb3S4R1G7 AC131747.1-201ENSMUST00000226159 793 ntBASIC4.2□□□□□ -1.74
H2afb3S4R1G7 CT025525.4-201ENSMUST00000227728 277 ntBASIC4.2□□□□□ -1.74
H2afb3S4R1G7 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC4.2□□□□□ -1.74
H2afb3S4R1G7 Gm25699-201ENSMUST00000082896 167 ntBASIC4.2□□□□□ -1.74
H2afb3S4R1G7 Gm24525-201ENSMUST00000082917 151 ntBASIC4.2□□□□□ -1.74
H2afb3S4R1G7 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
H2afb3S4R1G7 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
H2afb3S4R1G7 Gm43654-201ENSMUST00000200664 3417 ntBASIC4.2□□□□□ -1.74
H2afb3S4R1G7 AC144772.3-201ENSMUST00000228829 3126 ntBASIC4.2□□□□□ -1.74
H2afb3S4R1G7 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
H2afb3S4R1G7 Gm2123-201ENSMUST00000221476 2836 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 91.1 ms