Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Trim39Q9ESN2 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Trim39Q9ESN2 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Trim39Q9ESN2 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Trim39Q9ESN2 Gm43266-201ENSMUST00000201049 1771 ntBASIC5.36□□□□□ -1.55
Trim39Q9ESN2 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC5.36□□□□□ -1.55
Trim39Q9ESN2 Gm43826-201ENSMUST00000199604 2612 ntBASIC5.36□□□□□ -1.55
Trim39Q9ESN2 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC5.36□□□□□ -1.55
Trim39Q9ESN2 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Trim39Q9ESN2 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
Trim39Q9ESN2 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Trim39Q9ESN2 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Trim39Q9ESN2 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC5.36□□□□□ -1.55
Trim39Q9ESN2 Phkb-201ENSMUST00000053771 5351 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Trim39Q9ESN2 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC5.35□□□□□ -1.55
Trim39Q9ESN2 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
Trim39Q9ESN2 AC130827.1-201ENSMUST00000220476 3850 ntBASIC5.35□□□□□ -1.55
Trim39Q9ESN2 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Trim39Q9ESN2 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Trim39Q9ESN2 Gm9930-201ENSMUST00000066742 3151 ntBASIC5.35□□□□□ -1.55
Trim39Q9ESN2 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Trim39Q9ESN2 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Trim39Q9ESN2 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC5.35□□□□□ -1.55
Trim39Q9ESN2 Gm23294-201ENSMUST00000104150 164 ntBASIC5.35□□□□□ -1.55
Trim39Q9ESN2 Gm22371-201ENSMUST00000104588 130 ntBASIC5.35□□□□□ -1.55
Trim39Q9ESN2 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
Trim39Q9ESN2 Gm42674-201ENSMUST00000107330 446 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
Trim39Q9ESN2 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC5.35□□□□□ -1.55
Trim39Q9ESN2 Gm14823-201ENSMUST00000117698 238 ntBASIC5.35□□□□□ -1.55
Trim39Q9ESN2 Gm15332-201ENSMUST00000118386 357 ntBASIC5.35□□□□□ -1.55
Trim39Q9ESN2 Gm14842-201ENSMUST00000119577 269 ntBASIC5.35□□□□□ -1.55
Trim39Q9ESN2 Gm13239-201ENSMUST00000119920 637 ntBASIC5.35□□□□□ -1.55
Trim39Q9ESN2 Gm12890-201ENSMUST00000120885 373 ntBASIC5.35□□□□□ -1.55
Trim39Q9ESN2 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC5.35□□□□□ -1.55
Trim39Q9ESN2 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Trim39Q9ESN2 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Trim39Q9ESN2 Gm26410-201ENSMUST00000157670 261 ntBASIC5.35□□□□□ -1.55
Trim39Q9ESN2 Gm23855-201ENSMUST00000158377 135 ntBASIC5.35□□□□□ -1.55
Trim39Q9ESN2 Gm24733-201ENSMUST00000158863 253 ntBASIC5.35□□□□□ -1.55
Trim39Q9ESN2 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC5.35□□□□□ -1.55
Trim39Q9ESN2 Gm4222-201ENSMUST00000165784 470 ntBASIC5.35□□□□□ -1.55
Trim39Q9ESN2 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Trim39Q9ESN2 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC5.35□□□□□ -1.55
Trim39Q9ESN2 Gm20657-201ENSMUST00000177079 515 ntBASIC5.35□□□□□ -1.55
Trim39Q9ESN2 Mir3473g-201ENSMUST00000183494 136 ntBASIC5.35□□□□□ -1.55
Trim39Q9ESN2 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC5.35□□□□□ -1.55
Trim39Q9ESN2 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Trim39Q9ESN2 Gm19193-201ENSMUST00000190263 590 ntBASIC5.35□□□□□ -1.55
Trim39Q9ESN2 Gm35013-201ENSMUST00000197218 832 ntBASIC5.35□□□□□ -1.55
Trim39Q9ESN2 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC5.35□□□□□ -1.55
Trim39Q9ESN2 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC5.35□□□□□ -1.55
Trim39Q9ESN2 Api5-ps-201ENSMUST00000206607 577 ntBASIC5.35□□□□□ -1.55
Trim39Q9ESN2 Gm44955-201ENSMUST00000208843 229 ntTSL 5 BASIC5.35□□□□□ -1.55
Trim39Q9ESN2 Krtap6-1-201ENSMUST00000076906 594 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Trim39Q9ESN2 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC5.35□□□□□ -1.55
Trim39Q9ESN2 Gm24454-201ENSMUST00000083349 132 ntBASIC5.35□□□□□ -1.55
Trim39Q9ESN2 Gm22740-201ENSMUST00000083439 109 ntBASIC5.35□□□□□ -1.55
Trim39Q9ESN2 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Trim39Q9ESN2 Gm44027-201ENSMUST00000203419 3480 ntBASIC5.35□□□□□ -1.55
Trim39Q9ESN2 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Trim39Q9ESN2 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Trim39Q9ESN2 AC147615.2-201ENSMUST00000219876 2154 ntBASIC5.35□□□□□ -1.55
Trim39Q9ESN2 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Trim39Q9ESN2 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Trim39Q9ESN2 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Trim39Q9ESN2 Olfr479-203ENSMUST00000214599 3248 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Trim39Q9ESN2 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC5.35□□□□□ -1.55
Trim39Q9ESN2 Gm11284-201ENSMUST00000121910 1887 ntBASIC5.34□□□□□ -1.55
Trim39Q9ESN2 Gm33378-201ENSMUST00000219831 2758 ntBASIC5.34□□□□□ -1.55
Trim39Q9ESN2 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
Trim39Q9ESN2 Cep70-201ENSMUST00000093795 2606 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Trim39Q9ESN2 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Trim39Q9ESN2 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Trim39Q9ESN2 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Trim39Q9ESN2 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Trim39Q9ESN2 Gm13770-201ENSMUST00000117149 305 ntBASIC5.34□□□□□ -1.55
Trim39Q9ESN2 Gm12805-201ENSMUST00000117305 1048 ntBASIC5.34□□□□□ -1.55
Trim39Q9ESN2 Gm15951-201ENSMUST00000118377 400 ntBASIC5.34□□□□□ -1.55
Trim39Q9ESN2 Gm12768-201ENSMUST00000120055 759 ntBASIC5.34□□□□□ -1.55
Trim39Q9ESN2 Gm12087-201ENSMUST00000121878 258 ntBASIC5.34□□□□□ -1.55
Trim39Q9ESN2 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Trim39Q9ESN2 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC5.34□□□□□ -1.55
Trim39Q9ESN2 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC5.34□□□□□ -1.55
Trim39Q9ESN2 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Trim39Q9ESN2 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Trim39Q9ESN2 Gm22492-201ENSMUST00000157192 297 ntBASIC5.34□□□□□ -1.55
Trim39Q9ESN2 Gm25013-201ENSMUST00000158402 128 ntBASIC5.34□□□□□ -1.55
Trim39Q9ESN2 Gm24860-201ENSMUST00000158457 276 ntBASIC5.34□□□□□ -1.55
Trim39Q9ESN2 Gm27512-201ENSMUST00000175328 126 ntBASIC5.34□□□□□ -1.55
Trim39Q9ESN2 Mir6992-201ENSMUST00000183342 109 ntBASIC5.34□□□□□ -1.55
Trim39Q9ESN2 Gm28783-201ENSMUST00000188872 359 ntTSL 5 BASIC5.34□□□□□ -1.55
Trim39Q9ESN2 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC5.34□□□□□ -1.55
Trim39Q9ESN2 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC5.34□□□□□ -1.55
Trim39Q9ESN2 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC5.34□□□□□ -1.55
Trim39Q9ESN2 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC5.34□□□□□ -1.55
Trim39Q9ESN2 AC153505.2-201ENSMUST00000217741 277 ntBASIC5.34□□□□□ -1.55
Trim39Q9ESN2 AC167229.1-201ENSMUST00000220057 469 ntBASIC5.34□□□□□ -1.55
Trim39Q9ESN2 AL662807.1-201ENSMUST00000224183 126 ntBASIC5.34□□□□□ -1.55
Trim39Q9ESN2 AC173482.4-201ENSMUST00000225096 348 ntBASIC5.34□□□□□ -1.55
Trim39Q9ESN2 CT025536.1-201ENSMUST00000226744 844 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms