Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Gm29793-201ENSMUST00000202874 460 ntBASIC4.35□□□□□ -1.71
Msh4Q99MT2 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC4.35□□□□□ -1.71
Msh4Q99MT2 Gm45063-201ENSMUST00000203726 472 ntBASIC4.35□□□□□ -1.71
Msh4Q99MT2 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
Msh4Q99MT2 Gm7726-201ENSMUST00000206241 231 ntBASIC4.35□□□□□ -1.71
Msh4Q99MT2 Gm7786-201ENSMUST00000210494 436 ntBASIC4.35□□□□□ -1.71
Msh4Q99MT2 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC4.35□□□□□ -1.71
Msh4Q99MT2 Gm45379-201ENSMUST00000211772 549 ntBASIC4.35□□□□□ -1.71
Msh4Q99MT2 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC4.35□□□□□ -1.71
Msh4Q99MT2 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC4.35□□□□□ -1.71
Msh4Q99MT2 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC4.35□□□□□ -1.71
Msh4Q99MT2 AC135377.1-201ENSMUST00000223692 463 ntBASIC4.35□□□□□ -1.71
Msh4Q99MT2 AC090496.1-201ENSMUST00000226020 260 ntBASIC4.35□□□□□ -1.71
Msh4Q99MT2 AC154626.1-201ENSMUST00000226070 311 ntBASIC4.35□□□□□ -1.71
Msh4Q99MT2 AC144798.1-201ENSMUST00000228120 391 ntBASIC4.35□□□□□ -1.71
Msh4Q99MT2 Olfr1161-201ENSMUST00000054845 1012 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Msh4Q99MT2 Olfr25-201ENSMUST00000071449 1068 ntAPPRIS P2 BASIC4.35□□□□□ -1.71
Msh4Q99MT2 Prl7c1-201ENSMUST00000072943 1016 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Msh4Q99MT2 Mir99a-201ENSMUST00000083596 65 ntBASIC4.35□□□□□ -1.71
Msh4Q99MT2 Olfr593-201ENSMUST00000098206 984 ntAPPRIS P2 BASIC4.35□□□□□ -1.71
Msh4Q99MT2 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Msh4Q99MT2 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC4.35□□□□□ -1.71
Msh4Q99MT2 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Msh4Q99MT2 Gm5653-201ENSMUST00000223393 1337 ntBASIC4.35□□□□□ -1.71
Msh4Q99MT2 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
Msh4Q99MT2 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Msh4Q99MT2 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Msh4Q99MT2 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Msh4Q99MT2 Gm13340-201ENSMUST00000117219 1545 ntBASIC4.35□□□□□ -1.71
Msh4Q99MT2 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Msh4Q99MT2 Gm14404-201ENSMUST00000119117 1660 ntBASIC4.35□□□□□ -1.71
Msh4Q99MT2 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Msh4Q99MT2 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Msh4Q99MT2 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Msh4Q99MT2 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Msh4Q99MT2 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Msh4Q99MT2 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Msh4Q99MT2 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Msh4Q99MT2 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC4.34□□□□□ -1.71
Msh4Q99MT2 Gm23948-201ENSMUST00000104030 132 ntBASIC4.34□□□□□ -1.71
Msh4Q99MT2 Gm22473-201ENSMUST00000104114 132 ntBASIC4.34□□□□□ -1.71
Msh4Q99MT2 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Msh4Q99MT2 Gm15108-201ENSMUST00000116160 803 ntBASIC4.34□□□□□ -1.71
Msh4Q99MT2 Gm22091-201ENSMUST00000116908 127 ntBASIC4.34□□□□□ -1.71
Msh4Q99MT2 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC4.34□□□□□ -1.71
Msh4Q99MT2 Olfr1081-ps1-201ENSMUST00000120210 945 ntBASIC4.34□□□□□ -1.71
Msh4Q99MT2 Gm22208-201ENSMUST00000122658 110 ntBASIC4.34□□□□□ -1.71
Msh4Q99MT2 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Msh4Q99MT2 Mup-ps2-201ENSMUST00000142602 533 ntBASIC4.34□□□□□ -1.71
Msh4Q99MT2 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Msh4Q99MT2 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC4.34□□□□□ -1.71
Msh4Q99MT2 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC4.34□□□□□ -1.71
Msh4Q99MT2 Gm26373-201ENSMUST00000157833 103 ntBASIC4.34□□□□□ -1.71
Msh4Q99MT2 Gm25447-201ENSMUST00000158997 128 ntBASIC4.34□□□□□ -1.71
Msh4Q99MT2 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Msh4Q99MT2 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Msh4Q99MT2 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Msh4Q99MT2 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Msh4Q99MT2 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC4.34□□□□□ -1.71
Msh4Q99MT2 Gm4842-201ENSMUST00000183237 835 ntBASIC4.34□□□□□ -1.71
Msh4Q99MT2 Mir6963-201ENSMUST00000183535 71 ntBASIC4.34□□□□□ -1.71
Msh4Q99MT2 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Msh4Q99MT2 Gm20162-201ENSMUST00000193629 871 ntBASIC4.34□□□□□ -1.71
Msh4Q99MT2 Gm37167-201ENSMUST00000194946 396 ntBASIC4.34□□□□□ -1.71
Msh4Q99MT2 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Msh4Q99MT2 Gm43825-201ENSMUST00000199650 734 ntBASIC4.34□□□□□ -1.71
Msh4Q99MT2 Gm17956-201ENSMUST00000199931 838 ntBASIC4.34□□□□□ -1.71
Msh4Q99MT2 Gm44348-201ENSMUST00000200165 122 ntBASIC4.34□□□□□ -1.71
Msh4Q99MT2 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC4.34□□□□□ -1.71
Msh4Q99MT2 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Msh4Q99MT2 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC4.34□□□□□ -1.71
Msh4Q99MT2 AC093926.1-201ENSMUST00000213730 243 ntBASIC4.34□□□□□ -1.71
Msh4Q99MT2 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Msh4Q99MT2 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC4.34□□□□□ -1.71
Msh4Q99MT2 Gm46327-201ENSMUST00000218240 365 ntBASIC4.34□□□□□ -1.71
Msh4Q99MT2 Gm3338-201ENSMUST00000220982 269 ntBASIC4.34□□□□□ -1.71
Msh4Q99MT2 CT009713.4-201ENSMUST00000224246 272 ntBASIC4.34□□□□□ -1.71
Msh4Q99MT2 AC168059.1-201ENSMUST00000225846 841 ntBASIC4.34□□□□□ -1.71
Msh4Q99MT2 AC130823.2-201ENSMUST00000226169 290 ntBASIC4.34□□□□□ -1.71
Msh4Q99MT2 CT025157.1-201ENSMUST00000226241 292 ntBASIC4.34□□□□□ -1.71
Msh4Q99MT2 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Msh4Q99MT2 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Msh4Q99MT2 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Msh4Q99MT2 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Msh4Q99MT2 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Msh4Q99MT2 Gm22293-201ENSMUST00000083314 109 ntBASIC4.34□□□□□ -1.71
Msh4Q99MT2 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
Msh4Q99MT2 Gm42721-201ENSMUST00000197165 1523 ntBASIC4.34□□□□□ -1.71
Msh4Q99MT2 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Msh4Q99MT2 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
Msh4Q99MT2 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
Msh4Q99MT2 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
Msh4Q99MT2 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.72
Msh4Q99MT2 Gm3972-201ENSMUST00000173960 2861 ntBASIC4.34□□□□□ -1.72
Msh4Q99MT2 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.72
Msh4Q99MT2 Gm42843-201ENSMUST00000196328 3616 ntBASIC4.34□□□□□ -1.72
Msh4Q99MT2 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
Msh4Q99MT2 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
Msh4Q99MT2 AC115034.1-201ENSMUST00000215393 3846 ntBASIC4.33□□□□□ -1.72
Msh4Q99MT2 AC156632.1-201ENSMUST00000220626 3845 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 127.7 ms