Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 AC069561.3-201ENSMUST00000217321 114 ntBASIC5.23□□□□□ -1.57
Ushbp1Q8R370 AC130536.1-201ENSMUST00000224425 271 ntBASIC5.23□□□□□ -1.57
Ushbp1Q8R370 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Ushbp1Q8R370 Hypm-201ENSMUST00000044987 581 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Ushbp1Q8R370 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Ushbp1Q8R370 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Ushbp1Q8R370 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Ushbp1Q8R370 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Ushbp1Q8R370 Gm7269-201ENSMUST00000210819 1373 ntBASIC5.23□□□□□ -1.57
Ushbp1Q8R370 Olfr1298-202ENSMUST00000208284 1563 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Ushbp1Q8R370 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Ushbp1Q8R370 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC5.23□□□□□ -1.57
Ushbp1Q8R370 Gm38101-201ENSMUST00000193484 3557 ntBASIC5.23□□□□□ -1.57
Ushbp1Q8R370 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC5.23□□□□□ -1.57
Ushbp1Q8R370 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC5.23□□□□□ -1.57
Ushbp1Q8R370 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
Ushbp1Q8R370 Gm42721-201ENSMUST00000197165 1523 ntBASIC5.23□□□□□ -1.57
Ushbp1Q8R370 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Ushbp1Q8R370 Gm37900-201ENSMUST00000195510 3805 ntBASIC5.22□□□□□ -1.57
Ushbp1Q8R370 AC154548.1-201ENSMUST00000225844 3838 ntBASIC5.22□□□□□ -1.57
Ushbp1Q8R370 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Ushbp1Q8R370 Gm37831-201ENSMUST00000191685 1787 ntBASIC5.22□□□□□ -1.57
Ushbp1Q8R370 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Ushbp1Q8R370 AC155922.2-201ENSMUST00000220240 1458 ntTSL 5 BASIC5.22□□□□□ -1.57
Ushbp1Q8R370 Rps19-ps7-201ENSMUST00000116122 438 ntBASIC5.22□□□□□ -1.57
Ushbp1Q8R370 Gm14677-201ENSMUST00000117866 486 ntBASIC5.22□□□□□ -1.57
Ushbp1Q8R370 Gm11943-201ENSMUST00000119473 327 ntBASIC5.22□□□□□ -1.57
Ushbp1Q8R370 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC5.22□□□□□ -1.57
Ushbp1Q8R370 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Ushbp1Q8R370 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC5.22□□□□□ -1.57
Ushbp1Q8R370 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC5.22□□□□□ -1.57
Ushbp1Q8R370 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Ushbp1Q8R370 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC5.22□□□□□ -1.57
Ushbp1Q8R370 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC5.22□□□□□ -1.57
Ushbp1Q8R370 Gm25412-201ENSMUST00000180258 107 ntBASIC5.22□□□□□ -1.57
Ushbp1Q8R370 Gm26828-201ENSMUST00000180640 172 ntBASIC5.22□□□□□ -1.57
Ushbp1Q8R370 Gm28889-201ENSMUST00000185350 959 ntTSL 5 BASIC5.22□□□□□ -1.57
Ushbp1Q8R370 Gm28615-201ENSMUST00000187527 482 ntBASIC5.22□□□□□ -1.57
Ushbp1Q8R370 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Ushbp1Q8R370 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Ushbp1Q8R370 Gm8599-201ENSMUST00000193033 457 ntBASIC5.22□□□□□ -1.57
Ushbp1Q8R370 Gm43015-201ENSMUST00000199087 565 ntBASIC5.22□□□□□ -1.57
Ushbp1Q8R370 Gm43276-201ENSMUST00000199712 364 ntBASIC5.22□□□□□ -1.57
Ushbp1Q8R370 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC5.22□□□□□ -1.57
Ushbp1Q8R370 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC5.22□□□□□ -1.57
Ushbp1Q8R370 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC5.22□□□□□ -1.57
Ushbp1Q8R370 Sult2a7-203ENSMUST00000210034 870 ntTSL 5 BASIC5.22□□□□□ -1.57
Ushbp1Q8R370 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC5.22□□□□□ -1.57
Ushbp1Q8R370 AC183096.1-201ENSMUST00000226392 130 ntBASIC5.22□□□□□ -1.57
Ushbp1Q8R370 AC158981.3-202ENSMUST00000228906 523 ntBASIC5.22□□□□□ -1.57
Ushbp1Q8R370 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
Ushbp1Q8R370 n-R5s152-201ENSMUST00000093641 119 ntBASIC5.22□□□□□ -1.57
Ushbp1Q8R370 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Ushbp1Q8R370 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Ushbp1Q8R370 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Ushbp1Q8R370 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Ushbp1Q8R370 Gm43200-201ENSMUST00000200385 2161 ntBASIC5.22□□□□□ -1.57
Ushbp1Q8R370 Gm10997-201ENSMUST00000210294 1500 ntBASIC5.22□□□□□ -1.57
Ushbp1Q8R370 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Ushbp1Q8R370 Gm13477-201ENSMUST00000121620 2687 ntBASIC5.21□□□□□ -1.57
Ushbp1Q8R370 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.57
Ushbp1Q8R370 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
Ushbp1Q8R370 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Ushbp1Q8R370 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Ushbp1Q8R370 Olfr1484-203ENSMUST00000215567 3699 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Ushbp1Q8R370 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ushbp1Q8R370 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Ushbp1Q8R370 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Ushbp1Q8R370 Gm22771-201ENSMUST00000104449 91 ntBASIC5.21□□□□□ -1.58
Ushbp1Q8R370 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC5.21□□□□□ -1.58
Ushbp1Q8R370 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC5.21□□□□□ -1.58
Ushbp1Q8R370 Gm22345-201ENSMUST00000122644 107 ntBASIC5.21□□□□□ -1.58
Ushbp1Q8R370 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC5.21□□□□□ -1.58
Ushbp1Q8R370 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ushbp1Q8R370 Gm22819-201ENSMUST00000157445 303 ntBASIC5.21□□□□□ -1.58
Ushbp1Q8R370 Gm26173-201ENSMUST00000158416 136 ntBASIC5.21□□□□□ -1.58
Ushbp1Q8R370 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC5.21□□□□□ -1.58
Ushbp1Q8R370 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC5.21□□□□□ -1.58
Ushbp1Q8R370 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Ushbp1Q8R370 Gm26983-201ENSMUST00000182051 388 ntBASIC5.21□□□□□ -1.58
Ushbp1Q8R370 Gm27317-201ENSMUST00000183533 95 ntBASIC5.21□□□□□ -1.58
Ushbp1Q8R370 Gm29413-201ENSMUST00000186019 880 ntBASIC5.21□□□□□ -1.58
Ushbp1Q8R370 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Ushbp1Q8R370 Gm29639-201ENSMUST00000188375 580 ntBASIC5.21□□□□□ -1.58
Ushbp1Q8R370 Gm37636-201ENSMUST00000193583 359 ntBASIC5.21□□□□□ -1.58
Ushbp1Q8R370 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC5.21□□□□□ -1.58
Ushbp1Q8R370 Gm2314-201ENSMUST00000200391 586 ntBASIC5.21□□□□□ -1.58
Ushbp1Q8R370 Gm44254-201ENSMUST00000204184 322 ntBASIC5.21□□□□□ -1.58
Ushbp1Q8R370 Gm9560-201ENSMUST00000205012 1201 ntBASIC5.21□□□□□ -1.58
Ushbp1Q8R370 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Ushbp1Q8R370 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC5.21□□□□□ -1.58
Ushbp1Q8R370 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC5.21□□□□□ -1.58
Ushbp1Q8R370 AL662807.1-201ENSMUST00000224183 126 ntBASIC5.21□□□□□ -1.58
Ushbp1Q8R370 AC091783.4-201ENSMUST00000224940 611 ntBASIC5.21□□□□□ -1.58
Ushbp1Q8R370 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Ushbp1Q8R370 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Ushbp1Q8R370 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Ushbp1Q8R370 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Ushbp1Q8R370 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
Ushbp1Q8R370 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms