Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Sh3rf1Q69ZI1 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Sh3rf1Q69ZI1 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Sh3rf1Q69ZI1 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC5.44□□□□□ -1.54
Sh3rf1Q69ZI1 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Sh3rf1Q69ZI1 Gm11936-201ENSMUST00000118323 160 ntBASIC5.44□□□□□ -1.54
Sh3rf1Q69ZI1 Gm11268-201ENSMUST00000118347 267 ntBASIC5.44□□□□□ -1.54
Sh3rf1Q69ZI1 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC5.44□□□□□ -1.54
Sh3rf1Q69ZI1 Gm6175-201ENSMUST00000121351 400 ntBASIC5.44□□□□□ -1.54
Sh3rf1Q69ZI1 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC5.44□□□□□ -1.54
Sh3rf1Q69ZI1 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC5.44□□□□□ -1.54
Sh3rf1Q69ZI1 Gm27579-201ENSMUST00000158113 63 ntBASIC5.44□□□□□ -1.54
Sh3rf1Q69ZI1 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Sh3rf1Q69ZI1 Mir6903-201ENSMUST00000183597 88 ntBASIC5.44□□□□□ -1.54
Sh3rf1Q69ZI1 Mir6539-201ENSMUST00000183732 110 ntBASIC5.44□□□□□ -1.54
Sh3rf1Q69ZI1 Mir7687-201ENSMUST00000184722 59 ntBASIC5.44□□□□□ -1.54
Sh3rf1Q69ZI1 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Sh3rf1Q69ZI1 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC5.44□□□□□ -1.54
Sh3rf1Q69ZI1 Gm36985-201ENSMUST00000195595 379 ntBASIC5.44□□□□□ -1.54
Sh3rf1Q69ZI1 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC5.44□□□□□ -1.54
Sh3rf1Q69ZI1 Gm6520-201ENSMUST00000200636 410 ntBASIC5.44□□□□□ -1.54
Sh3rf1Q69ZI1 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC5.44□□□□□ -1.54
Sh3rf1Q69ZI1 Gm18325-201ENSMUST00000203228 835 ntBASIC5.44□□□□□ -1.54
Sh3rf1Q69ZI1 Gm35876-201ENSMUST00000205044 459 ntBASIC5.44□□□□□ -1.54
Sh3rf1Q69ZI1 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Sh3rf1Q69ZI1 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC5.44□□□□□ -1.54
Sh3rf1Q69ZI1 Gm7380-201ENSMUST00000211599 466 ntBASIC5.44□□□□□ -1.54
Sh3rf1Q69ZI1 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC5.44□□□□□ -1.54
Sh3rf1Q69ZI1 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC5.44□□□□□ -1.54
Sh3rf1Q69ZI1 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Sh3rf1Q69ZI1 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Sh3rf1Q69ZI1 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Sh3rf1Q69ZI1 Gm9309-201ENSMUST00000223537 546 ntBASIC5.44□□□□□ -1.54
Sh3rf1Q69ZI1 AC161884.2-201ENSMUST00000224513 227 ntBASIC5.44□□□□□ -1.54
Sh3rf1Q69ZI1 AC129085.4-201ENSMUST00000224536 570 ntBASIC5.44□□□□□ -1.54
Sh3rf1Q69ZI1 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Sh3rf1Q69ZI1 AL589742.1-201ENSMUST00000226034 349 ntBASIC5.44□□□□□ -1.54
Sh3rf1Q69ZI1 Gm10064-201ENSMUST00000071235 399 ntBASIC5.44□□□□□ -1.54
Sh3rf1Q69ZI1 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Sh3rf1Q69ZI1 Gm7676-201ENSMUST00000084055 319 ntBASIC5.44□□□□□ -1.54
Sh3rf1Q69ZI1 Olfr203-201ENSMUST00000089305 924 ntBASIC5.44□□□□□ -1.54
Sh3rf1Q69ZI1 Olfr1314-201ENSMUST00000099598 939 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Sh3rf1Q69ZI1 Abcc2-202ENSMUST00000099413 1926 ntBASIC5.44□□□□□ -1.54
Sh3rf1Q69ZI1 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Sh3rf1Q69ZI1 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC5.44□□□□□ -1.54
Sh3rf1Q69ZI1 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Sh3rf1Q69ZI1 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Sh3rf1Q69ZI1 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC5.43□□□□□ -1.54
Sh3rf1Q69ZI1 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC5.43□□□□□ -1.54
Sh3rf1Q69ZI1 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Sh3rf1Q69ZI1 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC5.43□□□□□ -1.54
Sh3rf1Q69ZI1 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Sh3rf1Q69ZI1 Olfr491-202ENSMUST00000209545 1944 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Sh3rf1Q69ZI1 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Sh3rf1Q69ZI1 Fus-202ENSMUST00000079045 2623 ntBASIC5.43□□□□□ -1.54
Sh3rf1Q69ZI1 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC5.43□□□□□ -1.54
Sh3rf1Q69ZI1 Gm13064-201ENSMUST00000119125 557 ntBASIC5.43□□□□□ -1.54
Sh3rf1Q69ZI1 Gm15177-201ENSMUST00000120491 577 ntBASIC5.43□□□□□ -1.54
Sh3rf1Q69ZI1 Gm14876-201ENSMUST00000120795 327 ntBASIC5.43□□□□□ -1.54
Sh3rf1Q69ZI1 Gm13452-201ENSMUST00000120896 1097 ntBASIC5.43□□□□□ -1.54
Sh3rf1Q69ZI1 Gm24295-201ENSMUST00000158298 131 ntBASIC5.43□□□□□ -1.54
Sh3rf1Q69ZI1 Gm24940-201ENSMUST00000158326 108 ntBASIC5.43□□□□□ -1.54
Sh3rf1Q69ZI1 Gm22940-201ENSMUST00000158560 155 ntBASIC5.43□□□□□ -1.54
Sh3rf1Q69ZI1 Gm8292-201ENSMUST00000162574 396 ntBASIC5.43□□□□□ -1.54
Sh3rf1Q69ZI1 Gm7335-201ENSMUST00000172475 373 ntBASIC5.43□□□□□ -1.54
Sh3rf1Q69ZI1 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Sh3rf1Q69ZI1 Mir7006-201ENSMUST00000183624 69 ntBASIC5.43□□□□□ -1.54
Sh3rf1Q69ZI1 Gm27855-201ENSMUST00000184122 128 ntBASIC5.43□□□□□ -1.54
Sh3rf1Q69ZI1 Gm18802-201ENSMUST00000186270 888 ntBASIC5.43□□□□□ -1.54
Sh3rf1Q69ZI1 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC5.43□□□□□ -1.54
Sh3rf1Q69ZI1 Gm29813-201ENSMUST00000195856 447 ntBASIC5.43□□□□□ -1.54
Sh3rf1Q69ZI1 Gm42428-201ENSMUST00000198677 302 ntBASIC5.43□□□□□ -1.54
Sh3rf1Q69ZI1 Gm4734-201ENSMUST00000200117 777 ntBASIC5.43□□□□□ -1.54
Sh3rf1Q69ZI1 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC5.43□□□□□ -1.54
Sh3rf1Q69ZI1 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Sh3rf1Q69ZI1 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC5.43□□□□□ -1.54
Sh3rf1Q69ZI1 Gm45023-201ENSMUST00000207951 379 ntBASIC5.43□□□□□ -1.54
Sh3rf1Q69ZI1 AC153954.2-201ENSMUST00000213811 287 ntBASIC5.43□□□□□ -1.54
Sh3rf1Q69ZI1 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC5.43□□□□□ -1.54
Sh3rf1Q69ZI1 Gm18507-201ENSMUST00000218855 525 ntBASIC5.43□□□□□ -1.54
Sh3rf1Q69ZI1 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC5.43□□□□□ -1.54
Sh3rf1Q69ZI1 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC5.43□□□□□ -1.54
Sh3rf1Q69ZI1 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC5.43□□□□□ -1.54
Sh3rf1Q69ZI1 AC126554.1-201ENSMUST00000222161 271 ntBASIC5.43□□□□□ -1.54
Sh3rf1Q69ZI1 CT030184.1-201ENSMUST00000222393 416 ntBASIC5.43□□□□□ -1.54
Sh3rf1Q69ZI1 Gm8288-201ENSMUST00000223406 593 ntBASIC5.43□□□□□ -1.54
Sh3rf1Q69ZI1 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Sh3rf1Q69ZI1 Gm10222-201ENSMUST00000088336 294 ntBASIC5.43□□□□□ -1.54
Sh3rf1Q69ZI1 Gm11808-201ENSMUST00000089430 504 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Sh3rf1Q69ZI1 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
Sh3rf1Q69ZI1 Gm44518-201ENSMUST00000208080 4370 ntBASIC5.43□□□□□ -1.54
Sh3rf1Q69ZI1 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Sh3rf1Q69ZI1 Gm37589-201ENSMUST00000193609 3994 ntBASIC5.43□□□□□ -1.54
Sh3rf1Q69ZI1 Gm38451-201ENSMUST00000208329 2646 ntBASIC5.43□□□□□ -1.54
Sh3rf1Q69ZI1 Gm43317-201ENSMUST00000197924 2544 ntBASIC5.42□□□□□ -1.54
Sh3rf1Q69ZI1 Gm42702-201ENSMUST00000199515 4217 ntBASIC5.42□□□□□ -1.54
Sh3rf1Q69ZI1 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Sh3rf1Q69ZI1 Gm22834-201ENSMUST00000102021 79 ntBASIC5.42□□□□□ -1.54
Sh3rf1Q69ZI1 Gm14125-201ENSMUST00000113442 680 ntBASIC5.42□□□□□ -1.54
Sh3rf1Q69ZI1 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms