Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Mir190b-201ENSMUST00000104803 80 ntBASIC5.57□□□□□ -1.52
Trim28Q62318 Gm14899-201ENSMUST00000118673 548 ntBASIC5.57□□□□□ -1.52
Trim28Q62318 Defa-ps1-201ENSMUST00000119062 282 ntBASIC5.57□□□□□ -1.52
Trim28Q62318 Gm11200-201ENSMUST00000121698 448 ntBASIC5.57□□□□□ -1.52
Trim28Q62318 Defa-ps6-201ENSMUST00000122172 282 ntBASIC5.57□□□□□ -1.52
Trim28Q62318 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Trim28Q62318 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Trim28Q62318 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC5.57□□□□□ -1.52
Trim28Q62318 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Trim28Q62318 Gm20612-201ENSMUST00000176318 236 ntBASIC5.57□□□□□ -1.52
Trim28Q62318 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
Trim28Q62318 Gm28471-201ENSMUST00000185994 615 ntBASIC5.57□□□□□ -1.52
Trim28Q62318 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Trim28Q62318 Trbv24-201ENSMUST00000194614 347 ntBASIC5.57□□□□□ -1.52
Trim28Q62318 Gm43730-201ENSMUST00000199863 372 ntBASIC5.57□□□□□ -1.52
Trim28Q62318 Gm44765-201ENSMUST00000206927 601 ntBASIC5.57□□□□□ -1.52
Trim28Q62318 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC5.57□□□□□ -1.52
Trim28Q62318 Gm45727-201ENSMUST00000212886 572 ntBASIC5.57□□□□□ -1.52
Trim28Q62318 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC5.57□□□□□ -1.52
Trim28Q62318 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC5.57□□□□□ -1.52
Trim28Q62318 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC5.57□□□□□ -1.52
Trim28Q62318 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC5.57□□□□□ -1.52
Trim28Q62318 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Trim28Q62318 Olfr827-202ENSMUST00000213568 8457 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Trim28Q62318 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Trim28Q62318 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim28Q62318 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
Trim28Q62318 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim28Q62318 AC124446.1-201ENSMUST00000221027 2644 ntBASIC5.56□□□□□ -1.52
Trim28Q62318 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Trim28Q62318 Gm15381-201ENSMUST00000121501 1156 ntBASIC5.56□□□□□ -1.52
Trim28Q62318 Snrpert-201ENSMUST00000121967 279 ntBASIC5.56□□□□□ -1.52
Trim28Q62318 Gm14473-201ENSMUST00000122269 557 ntBASIC5.56□□□□□ -1.52
Trim28Q62318 Gm22204-201ENSMUST00000122654 327 ntBASIC5.56□□□□□ -1.52
Trim28Q62318 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Trim28Q62318 Gm26036-201ENSMUST00000158149 144 ntBASIC5.56□□□□□ -1.52
Trim28Q62318 Gm26352-201ENSMUST00000158223 125 ntBASIC5.56□□□□□ -1.52
Trim28Q62318 Gm22135-201ENSMUST00000158752 108 ntBASIC5.56□□□□□ -1.52
Trim28Q62318 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Trim28Q62318 Gm27588-201ENSMUST00000185096 263 ntBASIC5.56□□□□□ -1.52
Trim28Q62318 Gm18406-201ENSMUST00000185872 669 ntBASIC5.56□□□□□ -1.52
Trim28Q62318 Gm44300-201ENSMUST00000196792 121 ntBASIC5.56□□□□□ -1.52
Trim28Q62318 Gm43853-201ENSMUST00000197162 301 ntBASIC5.56□□□□□ -1.52
Trim28Q62318 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC5.56□□□□□ -1.52
Trim28Q62318 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Trim28Q62318 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC5.56□□□□□ -1.52
Trim28Q62318 AC156790.5-201ENSMUST00000227075 231 ntBASIC5.56□□□□□ -1.52
Trim28Q62318 AC154532.2-201ENSMUST00000228947 598 ntBASIC5.56□□□□□ -1.52
Trim28Q62318 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim28Q62318 Gm9762-201ENSMUST00000036976 444 ntBASIC5.56□□□□□ -1.52
Trim28Q62318 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Trim28Q62318 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Trim28Q62318 Gm18954-201ENSMUST00000222200 1792 ntBASIC5.56□□□□□ -1.52
Trim28Q62318 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Trim28Q62318 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
Trim28Q62318 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
Trim28Q62318 Olfr584-202ENSMUST00000214215 3152 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Trim28Q62318 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Trim28Q62318 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Trim28Q62318 Gm43826-201ENSMUST00000199604 2612 ntBASIC5.56□□□□□ -1.52
Trim28Q62318 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim28Q62318 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim28Q62318 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim28Q62318 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Trim28Q62318 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Trim28Q62318 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
Trim28Q62318 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Trim28Q62318 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Trim28Q62318 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC5.55□□□□□ -1.52
Trim28Q62318 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC5.55□□□□□ -1.52
Trim28Q62318 Gm43374-201ENSMUST00000202498 2391 ntBASIC5.55□□□□□ -1.52
Trim28Q62318 Gm24517-201ENSMUST00000122560 107 ntBASIC5.55□□□□□ -1.52
Trim28Q62318 Gm25177-201ENSMUST00000122634 117 ntBASIC5.55□□□□□ -1.52
Trim28Q62318 Gm23212-201ENSMUST00000122718 60 ntBASIC5.55□□□□□ -1.52
Trim28Q62318 Gm4487-201ENSMUST00000150617 442 ntBASIC5.55□□□□□ -1.52
Trim28Q62318 Gm25386-201ENSMUST00000157814 288 ntBASIC5.55□□□□□ -1.52
Trim28Q62318 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC5.55□□□□□ -1.52
Trim28Q62318 Gm11392-201ENSMUST00000181419 710 ntBASIC5.55□□□□□ -1.52
Trim28Q62318 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC5.55□□□□□ -1.52
Trim28Q62318 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Trim28Q62318 Gm7449-201ENSMUST00000194393 663 ntBASIC5.55□□□□□ -1.52
Trim28Q62318 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Trim28Q62318 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC5.55□□□□□ -1.52
Trim28Q62318 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC5.55□□□□□ -1.52
Trim28Q62318 Igkv13-82-201ENSMUST00000200308 346 ntBASIC5.55□□□□□ -1.52
Trim28Q62318 Olfr897-ps1-201ENSMUST00000213589 935 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Trim28Q62318 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Trim28Q62318 Gm46998-201ENSMUST00000221444 330 ntBASIC5.55□□□□□ -1.52
Trim28Q62318 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Trim28Q62318 Gm23407-201ENSMUST00000082538 91 ntBASIC5.55□□□□□ -1.52
Trim28Q62318 Gm24268-201ENSMUST00000082990 110 ntBASIC5.55□□□□□ -1.52
Trim28Q62318 Mir16-2-201ENSMUST00000083672 95 ntBASIC5.55□□□□□ -1.52
Trim28Q62318 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
Trim28Q62318 Olfr1116-201ENSMUST00000090717 924 ntAPPRIS P2 BASIC5.55□□□□□ -1.52
Trim28Q62318 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
Trim28Q62318 Serpinb7-201ENSMUST00000086690 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Trim28Q62318 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Trim28Q62318 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Trim28Q62318 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Trim28Q62318 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 97.7 ms