Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Olfr145-201ENSMUST00000086062 6796 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Col6a1Q04857 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC5.75□□□□□ -1.49
Col6a1Q04857 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a1Q04857 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Col6a1Q04857 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a1Q04857 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Col6a1Q04857 Gm25563-201ENSMUST00000104603 74 ntBASIC5.75□□□□□ -1.49
Col6a1Q04857 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC5.75□□□□□ -1.49
Col6a1Q04857 Gm13650-201ENSMUST00000117729 433 ntBASIC5.75□□□□□ -1.49
Col6a1Q04857 Gm11408-201ENSMUST00000117889 519 ntBASIC5.75□□□□□ -1.49
Col6a1Q04857 Gm13804-201ENSMUST00000119552 172 ntBASIC5.75□□□□□ -1.49
Col6a1Q04857 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC5.75□□□□□ -1.49
Col6a1Q04857 Gm12884-201ENSMUST00000120371 325 ntBASIC5.75□□□□□ -1.49
Col6a1Q04857 Gm15168-201ENSMUST00000121057 316 ntBASIC5.75□□□□□ -1.49
Col6a1Q04857 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC5.75□□□□□ -1.49
Col6a1Q04857 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Col6a1Q04857 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC5.75□□□□□ -1.49
Col6a1Q04857 Gm23332-201ENSMUST00000157424 275 ntBASIC5.75□□□□□ -1.49
Col6a1Q04857 Gm23023-201ENSMUST00000158767 109 ntBASIC5.75□□□□□ -1.49
Col6a1Q04857 Gm23473-201ENSMUST00000158883 116 ntBASIC5.75□□□□□ -1.49
Col6a1Q04857 Gm16114-201ENSMUST00000161930 300 ntBASIC5.75□□□□□ -1.49
Col6a1Q04857 Gm23141-201ENSMUST00000178682 94 ntBASIC5.75□□□□□ -1.49
Col6a1Q04857 Gm21816-201ENSMUST00000179255 360 ntBASIC5.75□□□□□ -1.49
Col6a1Q04857 Gm22951-201ENSMUST00000179471 107 ntBASIC5.75□□□□□ -1.49
Col6a1Q04857 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a1Q04857 Gm27690-201ENSMUST00000184596 126 ntBASIC5.75□□□□□ -1.49
Col6a1Q04857 Trbv12-3-201ENSMUST00000192675 372 ntBASIC5.75□□□□□ -1.49
Col6a1Q04857 Gm5660-201ENSMUST00000197453 1149 ntBASIC5.75□□□□□ -1.49
Col6a1Q04857 Gm45523-201ENSMUST00000210712 799 ntBASIC5.75□□□□□ -1.49
Col6a1Q04857 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC5.75□□□□□ -1.49
Col6a1Q04857 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Col6a1Q04857 AC158803.3-201ENSMUST00000220024 211 ntBASIC5.75□□□□□ -1.49
Col6a1Q04857 AC154640.2-201ENSMUST00000226324 472 ntBASIC5.75□□□□□ -1.49
Col6a1Q04857 AC127371.1-201ENSMUST00000228516 312 ntBASIC5.75□□□□□ -1.49
Col6a1Q04857 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a1Q04857 Gm42798-201ENSMUST00000200853 3972 ntBASIC5.75□□□□□ -1.49
Col6a1Q04857 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a1Q04857 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a1Q04857 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC5.75□□□□□ -1.49
Col6a1Q04857 Gm43718-201ENSMUST00000197524 1857 ntBASIC5.75□□□□□ -1.49
Col6a1Q04857 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a1Q04857 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a1Q04857 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a1Q04857 Gm5653-201ENSMUST00000223393 1337 ntBASIC5.74□□□□□ -1.49
Col6a1Q04857 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col6a1Q04857 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC5.74□□□□□ -1.49
Col6a1Q04857 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
Col6a1Q04857 AC131720.1-201ENSMUST00000218629 2132 ntBASIC5.74□□□□□ -1.49
Col6a1Q04857 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC5.74□□□□□ -1.49
Col6a1Q04857 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC5.74□□□□□ -1.49
Col6a1Q04857 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col6a1Q04857 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC5.74□□□□□ -1.49
Col6a1Q04857 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col6a1Q04857 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Col6a1Q04857 Mir1193-201ENSMUST00000116761 121 ntBASIC5.74□□□□□ -1.49
Col6a1Q04857 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC5.74□□□□□ -1.49
Col6a1Q04857 Gm7429-201ENSMUST00000118664 348 ntBASIC5.74□□□□□ -1.49
Col6a1Q04857 Gm15905-201ENSMUST00000137042 298 ntBASIC5.74□□□□□ -1.49
Col6a1Q04857 Gm2020-201ENSMUST00000145242 579 ntBASIC5.74□□□□□ -1.49
Col6a1Q04857 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col6a1Q04857 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col6a1Q04857 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC5.74□□□□□ -1.49
Col6a1Q04857 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC5.74□□□□□ -1.49
Col6a1Q04857 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC5.74□□□□□ -1.49
Col6a1Q04857 Gm7094-201ENSMUST00000178379 366 ntBASIC5.74□□□□□ -1.49
Col6a1Q04857 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC5.74□□□□□ -1.49
Col6a1Q04857 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC5.74□□□□□ -1.49
Col6a1Q04857 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC5.74□□□□□ -1.49
Col6a1Q04857 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC5.74□□□□□ -1.49
Col6a1Q04857 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC5.74□□□□□ -1.49
Col6a1Q04857 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC5.74□□□□□ -1.49
Col6a1Q04857 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC5.74□□□□□ -1.49
Col6a1Q04857 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col6a1Q04857 Gm24306-201ENSMUST00000180229 79 ntBASIC5.74□□□□□ -1.49
Col6a1Q04857 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Col6a1Q04857 Gm26866-201ENSMUST00000180414 802 ntBASIC5.74□□□□□ -1.49
Col6a1Q04857 Zfp-ps-201ENSMUST00000185025 478 ntBASIC5.74□□□□□ -1.49
Col6a1Q04857 Gm27760-201ENSMUST00000185048 114 ntBASIC5.74□□□□□ -1.49
Col6a1Q04857 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC5.74□□□□□ -1.49
Col6a1Q04857 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC5.74□□□□□ -1.49
Col6a1Q04857 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC5.74□□□□□ -1.49
Col6a1Q04857 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC5.74□□□□□ -1.49
Col6a1Q04857 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC5.74□□□□□ -1.49
Col6a1Q04857 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC5.74□□□□□ -1.49
Col6a1Q04857 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col6a1Q04857 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC5.74□□□□□ -1.49
Col6a1Q04857 Nras-ps2-201ENSMUST00000195269 178 ntBASIC5.74□□□□□ -1.49
Col6a1Q04857 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC5.74□□□□□ -1.49
Col6a1Q04857 Gm43315-201ENSMUST00000198120 313 ntBASIC5.74□□□□□ -1.49
Col6a1Q04857 Gm43444-201ENSMUST00000198123 291 ntBASIC5.74□□□□□ -1.49
Col6a1Q04857 Gm44463-201ENSMUST00000198895 137 ntBASIC5.74□□□□□ -1.49
Col6a1Q04857 Gm6051-201ENSMUST00000201529 352 ntBASIC5.74□□□□□ -1.49
Col6a1Q04857 4930434O05Rik-201ENSMUST00000203259 387 ntBASIC5.74□□□□□ -1.49
Col6a1Q04857 Gm36633-201ENSMUST00000205873 647 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col6a1Q04857 Gm44611-201ENSMUST00000207507 355 ntBASIC5.74□□□□□ -1.49
Col6a1Q04857 Gm45422-201ENSMUST00000211476 246 ntBASIC5.74□□□□□ -1.49
Col6a1Q04857 Gm2059-201ENSMUST00000212025 287 ntBASIC5.74□□□□□ -1.49
Col6a1Q04857 AC183268.2-201ENSMUST00000214513 446 ntBASIC5.74□□□□□ -1.49
Col6a1Q04857 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC5.74□□□□□ -1.49
Col6a1Q04857 Gm46327-201ENSMUST00000218240 365 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms