Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Col8a1Q00780 Gm40020-201ENSMUST00000215677 1635 ntBASIC4.56□□□□□ -1.68
Col8a1Q00780 AC132852.2-201ENSMUST00000216052 2794 ntBASIC4.56□□□□□ -1.68
Col8a1Q00780 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Col8a1Q00780 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC4.56□□□□□ -1.68
Col8a1Q00780 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC4.56□□□□□ -1.68
Col8a1Q00780 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Col8a1Q00780 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
Col8a1Q00780 Olfr1305-202ENSMUST00000213405 1815 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Col8a1Q00780 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Col8a1Q00780 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
Col8a1Q00780 Gm7451-201ENSMUST00000208382 1392 ntBASIC4.55□□□□□ -1.68
Col8a1Q00780 Gm37205-201ENSMUST00000194820 2736 ntBASIC4.55□□□□□ -1.68
Col8a1Q00780 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC4.55□□□□□ -1.68
Col8a1Q00780 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Col8a1Q00780 Gm38451-201ENSMUST00000208329 2646 ntBASIC4.55□□□□□ -1.68
Col8a1Q00780 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Col8a1Q00780 AC124569.3-201ENSMUST00000224860 1621 ntBASIC4.55□□□□□ -1.68
Col8a1Q00780 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Col8a1Q00780 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Col8a1Q00780 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Col8a1Q00780 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
Col8a1Q00780 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Col8a1Q00780 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Col8a1Q00780 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Col8a1Q00780 Gm14750-201ENSMUST00000118262 516 ntBASIC4.55□□□□□ -1.68
Col8a1Q00780 Gm12543-201ENSMUST00000120410 543 ntBASIC4.55□□□□□ -1.68
Col8a1Q00780 Gm25176-201ENSMUST00000122640 125 ntBASIC4.55□□□□□ -1.68
Col8a1Q00780 Gm25706-201ENSMUST00000157828 247 ntBASIC4.55□□□□□ -1.68
Col8a1Q00780 Gm23069-201ENSMUST00000158240 311 ntBASIC4.55□□□□□ -1.68
Col8a1Q00780 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Col8a1Q00780 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC4.55□□□□□ -1.68
Col8a1Q00780 Gm27037-201ENSMUST00000182270 960 ntBASIC4.55□□□□□ -1.68
Col8a1Q00780 Gm29086-201ENSMUST00000186774 222 ntBASIC4.55□□□□□ -1.68
Col8a1Q00780 Gm29085-201ENSMUST00000187108 225 ntBASIC4.55□□□□□ -1.68
Col8a1Q00780 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC4.55□□□□□ -1.68
Col8a1Q00780 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC4.55□□□□□ -1.68
Col8a1Q00780 Npn2-202ENSMUST00000189275 235 ntBASIC4.55□□□□□ -1.68
Col8a1Q00780 Gm43779-201ENSMUST00000196691 829 ntBASIC4.55□□□□□ -1.68
Col8a1Q00780 Gm42539-201ENSMUST00000197009 308 ntBASIC4.55□□□□□ -1.68
Col8a1Q00780 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC4.55□□□□□ -1.68
Col8a1Q00780 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Col8a1Q00780 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Col8a1Q00780 CT010506.2-201ENSMUST00000225618 183 ntBASIC4.55□□□□□ -1.68
Col8a1Q00780 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC4.55□□□□□ -1.68
Col8a1Q00780 Olfr881-201ENSMUST00000074611 948 ntBASIC4.55□□□□□ -1.68
Col8a1Q00780 Gm23796-201ENSMUST00000084011 160 ntBASIC4.55□□□□□ -1.68
Col8a1Q00780 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC4.55□□□□□ -1.68
Col8a1Q00780 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Col8a1Q00780 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Col8a1Q00780 AL591843.1-201ENSMUST00000223686 3082 ntBASIC4.55□□□□□ -1.68
Col8a1Q00780 Gm18360-201ENSMUST00000173327 1524 ntBASIC4.55□□□□□ -1.68
Col8a1Q00780 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Col8a1Q00780 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC4.55□□□□□ -1.68
Col8a1Q00780 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Col8a1Q00780 CT025604.1-201ENSMUST00000221111 3436 ntBASIC4.55□□□□□ -1.68
Col8a1Q00780 Gm13712-201ENSMUST00000117484 2295 ntBASIC4.55□□□□□ -1.68
Col8a1Q00780 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Col8a1Q00780 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Col8a1Q00780 Gm44847-201ENSMUST00000207104 1991 ntBASIC4.54□□□□□ -1.68
Col8a1Q00780 Gm44708-201ENSMUST00000205580 2237 ntBASIC4.54□□□□□ -1.68
Col8a1Q00780 Olfr1489-202ENSMUST00000217182 11140 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Col8a1Q00780 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Col8a1Q00780 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
Col8a1Q00780 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
Col8a1Q00780 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
Col8a1Q00780 Gm37221-201ENSMUST00000194472 3007 ntBASIC4.54□□□□□ -1.68
Col8a1Q00780 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC4.54□□□□□ -1.68
Col8a1Q00780 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
Col8a1Q00780 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Col8a1Q00780 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Col8a1Q00780 Olfr228-202ENSMUST00000217292 1854 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Col8a1Q00780 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC4.54□□□□□ -1.68
Col8a1Q00780 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Col8a1Q00780 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Col8a1Q00780 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
Col8a1Q00780 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC4.54□□□□□ -1.68
Col8a1Q00780 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Col8a1Q00780 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC4.54□□□□□ -1.68
Col8a1Q00780 Gm37766-201ENSMUST00000192244 2567 ntBASIC4.54□□□□□ -1.68
Col8a1Q00780 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Col8a1Q00780 Mir450-2-201ENSMUST00000102444 69 ntBASIC4.54□□□□□ -1.68
Col8a1Q00780 Gm15297-201ENSMUST00000117795 290 ntBASIC4.54□□□□□ -1.68
Col8a1Q00780 Gm12884-201ENSMUST00000120371 325 ntBASIC4.54□□□□□ -1.68
Col8a1Q00780 Gm15168-201ENSMUST00000121057 316 ntBASIC4.54□□□□□ -1.68
Col8a1Q00780 Gm15840-201ENSMUST00000122099 943 ntBASIC4.54□□□□□ -1.68
Col8a1Q00780 Gm13214-201ENSMUST00000122137 408 ntBASIC4.54□□□□□ -1.68
Col8a1Q00780 Gm25784-201ENSMUST00000122524 81 ntBASIC4.54□□□□□ -1.68
Col8a1Q00780 Gm15905-201ENSMUST00000137042 298 ntBASIC4.54□□□□□ -1.68
Col8a1Q00780 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC4.54□□□□□ -1.68
Col8a1Q00780 Mir1945-201ENSMUST00000157919 78 ntBASIC4.54□□□□□ -1.68
Col8a1Q00780 Gm22839-201ENSMUST00000158436 304 ntBASIC4.54□□□□□ -1.68
Col8a1Q00780 Gm16566-201ENSMUST00000160387 910 ntBASIC4.54□□□□□ -1.68
Col8a1Q00780 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC4.54□□□□□ -1.68
Col8a1Q00780 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC4.54□□□□□ -1.68
Col8a1Q00780 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC4.54□□□□□ -1.68
Col8a1Q00780 Gm22367-201ENSMUST00000178930 132 ntBASIC4.54□□□□□ -1.68
Col8a1Q00780 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
Col8a1Q00780 Gm24306-201ENSMUST00000180229 79 ntBASIC4.54□□□□□ -1.68
Col8a1Q00780 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 105.9 ms