Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
Gabpb1Q00420 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC4.01□□□□□ -1.77
Gabpb1Q00420 Olfr996-201ENSMUST00000077075 1068 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Gabpb1Q00420 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
Gabpb1Q00420 Gm44682-201ENSMUST00000208501 2614 ntBASIC4.01□□□□□ -1.77
Gabpb1Q00420 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Gabpb1Q00420 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Gabpb1Q00420 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Gabpb1Q00420 Gm13340-201ENSMUST00000117219 1545 ntBASIC4□□□□□ -1.77
Gabpb1Q00420 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
Gabpb1Q00420 Gm37674-201ENSMUST00000194177 1834 ntBASIC4□□□□□ -1.77
Gabpb1Q00420 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
Gabpb1Q00420 AC153969.1-201ENSMUST00000214047 2605 ntBASIC4□□□□□ -1.77
Gabpb1Q00420 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC4□□□□□ -1.77
Gabpb1Q00420 Gm38069-201ENSMUST00000195360 2144 ntBASIC4□□□□□ -1.77
Gabpb1Q00420 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Gabpb1Q00420 Gm14816-201ENSMUST00000117174 294 ntBASIC4□□□□□ -1.77
Gabpb1Q00420 Gm11566-201ENSMUST00000118550 203 ntBASIC4□□□□□ -1.77
Gabpb1Q00420 Gm13831-201ENSMUST00000118764 302 ntBASIC4□□□□□ -1.77
Gabpb1Q00420 Gm12252-201ENSMUST00000119517 219 ntBASIC4□□□□□ -1.77
Gabpb1Q00420 Gm11404-201ENSMUST00000120872 494 ntBASIC4□□□□□ -1.77
Gabpb1Q00420 Gm22613-201ENSMUST00000122679 292 ntBASIC4□□□□□ -1.77
Gabpb1Q00420 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC4□□□□□ -1.77
Gabpb1Q00420 Gm5963-201ENSMUST00000143451 236 ntBASIC4□□□□□ -1.77
Gabpb1Q00420 Mup-ps4-201ENSMUST00000151005 539 ntBASIC4□□□□□ -1.77
Gabpb1Q00420 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC4□□□□□ -1.77
Gabpb1Q00420 Gm24850-201ENSMUST00000158029 119 ntBASIC4□□□□□ -1.77
Gabpb1Q00420 Gm23385-201ENSMUST00000158592 295 ntBASIC4□□□□□ -1.77
Gabpb1Q00420 Gm6650-201ENSMUST00000166710 614 ntBASIC4□□□□□ -1.77
Gabpb1Q00420 Mir3104-201ENSMUST00000174911 63 ntBASIC4□□□□□ -1.77
Gabpb1Q00420 Gm25942-201ENSMUST00000180080 110 ntBASIC4□□□□□ -1.77
Gabpb1Q00420 Gm11394-201ENSMUST00000181421 517 ntBASIC4□□□□□ -1.77
Gabpb1Q00420 Mir6933-201ENSMUST00000184982 81 ntBASIC4□□□□□ -1.77
Gabpb1Q00420 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC4□□□□□ -1.77
Gabpb1Q00420 Olfr1055-202ENSMUST00000188023 939 ntBASIC4□□□□□ -1.77
Gabpb1Q00420 Gm29334-201ENSMUST00000190334 357 ntBASIC4□□□□□ -1.77
Gabpb1Q00420 Gm29524-201ENSMUST00000190819 699 ntBASIC4□□□□□ -1.77
Gabpb1Q00420 Gm38098-201ENSMUST00000194115 241 ntBASIC4□□□□□ -1.77
Gabpb1Q00420 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC4□□□□□ -1.77
Gabpb1Q00420 Mir7682-201ENSMUST00000198467 58 ntBASIC4□□□□□ -1.77
Gabpb1Q00420 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC4□□□□□ -1.77
Gabpb1Q00420 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC4□□□□□ -1.77
Gabpb1Q00420 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC4□□□□□ -1.77
Gabpb1Q00420 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Gabpb1Q00420 AC159380.1-201ENSMUST00000218096 121 ntBASIC4□□□□□ -1.77
Gabpb1Q00420 AC152979.4-201ENSMUST00000219893 379 ntBASIC4□□□□□ -1.77
Gabpb1Q00420 Gm19786-201ENSMUST00000222589 580 ntBASIC4□□□□□ -1.77
Gabpb1Q00420 AC117949.2-201ENSMUST00000225900 584 ntBASIC4□□□□□ -1.77
Gabpb1Q00420 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC4□□□□□ -1.77
Gabpb1Q00420 Mir370-201ENSMUST00000083499 79 ntBASIC4□□□□□ -1.77
Gabpb1Q00420 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Gabpb1Q00420 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
Gabpb1Q00420 AC167420.1-201ENSMUST00000222999 2121 ntBASIC4□□□□□ -1.77
Gabpb1Q00420 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Gabpb1Q00420 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Gabpb1Q00420 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Gabpb1Q00420 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Gabpb1Q00420 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC3.99□□□□□ -1.77
Gabpb1Q00420 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Gabpb1Q00420 2310057J18Rik-202ENSMUST00000140558 1445 ntTSL 5 BASIC3.99□□□□□ -1.77
Gabpb1Q00420 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Gabpb1Q00420 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Gabpb1Q00420 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
Gabpb1Q00420 Gm15313-201ENSMUST00000119179 282 ntBASIC3.99□□□□□ -1.77
Gabpb1Q00420 Gm11387-201ENSMUST00000120266 772 ntBASIC3.99□□□□□ -1.77
Gabpb1Q00420 Gm14559-201ENSMUST00000121745 496 ntBASIC3.99□□□□□ -1.77
Gabpb1Q00420 Gm14903-201ENSMUST00000122435 537 ntBASIC3.99□□□□□ -1.77
Gabpb1Q00420 Gm25104-201ENSMUST00000122476 163 ntBASIC3.99□□□□□ -1.77
Gabpb1Q00420 Gm16327-201ENSMUST00000137146 228 ntBASIC3.99□□□□□ -1.77
Gabpb1Q00420 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC3.99□□□□□ -1.77
Gabpb1Q00420 Gm23231-201ENSMUST00000157299 104 ntBASIC3.99□□□□□ -1.77
Gabpb1Q00420 Gm24014-201ENSMUST00000157728 157 ntBASIC3.99□□□□□ -1.77
Gabpb1Q00420 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Gabpb1Q00420 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC3.99□□□□□ -1.77
Gabpb1Q00420 Gm24969-201ENSMUST00000180331 79 ntBASIC3.99□□□□□ -1.77
Gabpb1Q00420 Mir6393-201ENSMUST00000183709 94 ntBASIC3.99□□□□□ -1.77
Gabpb1Q00420 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC3.99□□□□□ -1.77
Gabpb1Q00420 Gm5372-201ENSMUST00000187540 409 ntBASIC3.99□□□□□ -1.77
Gabpb1Q00420 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Gabpb1Q00420 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Gabpb1Q00420 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC3.99□□□□□ -1.77
Gabpb1Q00420 Gm28724-202ENSMUST00000194218 295 ntBASIC3.99□□□□□ -1.77
Gabpb1Q00420 Gm37989-201ENSMUST00000195202 803 ntBASIC3.99□□□□□ -1.77
Gabpb1Q00420 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC3.99□□□□□ -1.77
Gabpb1Q00420 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Gabpb1Q00420 Gm42516-201ENSMUST00000198691 767 ntBASIC3.99□□□□□ -1.77
Gabpb1Q00420 Gm44404-201ENSMUST00000203979 636 ntBASIC3.99□□□□□ -1.77
Gabpb1Q00420 Gm10988-201ENSMUST00000209150 1088 ntBASIC3.99□□□□□ -1.77
Gabpb1Q00420 AC166343.1-201ENSMUST00000213261 577 ntBASIC3.99□□□□□ -1.77
Gabpb1Q00420 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC3.99□□□□□ -1.77
Gabpb1Q00420 Gm29774-201ENSMUST00000219270 436 ntBASIC3.99□□□□□ -1.77
Gabpb1Q00420 Gm31931-201ENSMUST00000219666 222 ntBASIC3.99□□□□□ -1.77
Gabpb1Q00420 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC3.99□□□□□ -1.77
Gabpb1Q00420 AC133598.4-202ENSMUST00000225267 469 ntBASIC3.99□□□□□ -1.77
Gabpb1Q00420 CT025525.1-201ENSMUST00000226325 1054 ntBASIC3.99□□□□□ -1.77
Gabpb1Q00420 Defb1-201ENSMUST00000051017 872 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Gabpb1Q00420 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Gabpb1Q00420 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Gabpb1Q00420 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
Gabpb1Q00420 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms