Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Sox3P53784 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
Sox3P53784 Gm42552-201ENSMUST00000196754 4497 ntBASIC3.72□□□□□ -1.81
Sox3P53784 Gm3623-201ENSMUST00000173643 2747 ntBASIC3.72□□□□□ -1.81
Sox3P53784 Wdr49-203ENSMUST00000204341 1344 ntTSL 5 BASIC3.71□□□□□ -1.81
Sox3P53784 4931412I15Rik-201ENSMUST00000207844 1448 ntBASIC3.71□□□□□ -1.82
Sox3P53784 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
Sox3P53784 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Sox3P53784 Cd53-201ENSMUST00000038845 1742 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Sox3P53784 Mir673-201ENSMUST00000102361 91 ntBASIC3.71□□□□□ -1.82
Sox3P53784 Gm26387-201ENSMUST00000104238 132 ntBASIC3.71□□□□□ -1.82
Sox3P53784 Gm14816-201ENSMUST00000117174 294 ntBASIC3.71□□□□□ -1.82
Sox3P53784 Gm14927-201ENSMUST00000120283 454 ntBASIC3.71□□□□□ -1.82
Sox3P53784 Gm12412-201ENSMUST00000121867 328 ntBASIC3.71□□□□□ -1.82
Sox3P53784 Gm12885-201ENSMUST00000122246 328 ntBASIC3.71□□□□□ -1.82
Sox3P53784 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Sox3P53784 Gm22380-201ENSMUST00000157479 95 ntBASIC3.71□□□□□ -1.82
Sox3P53784 Gm22889-201ENSMUST00000158639 58 ntBASIC3.71□□□□□ -1.82
Sox3P53784 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Sox3P53784 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Sox3P53784 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC3.71□□□□□ -1.82
Sox3P53784 Mir7676-1-201ENSMUST00000183491 62 ntBASIC3.71□□□□□ -1.82
Sox3P53784 Mir7676-2-201ENSMUST00000183523 62 ntBASIC3.71□□□□□ -1.82
Sox3P53784 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC3.71□□□□□ -1.82
Sox3P53784 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC3.71□□□□□ -1.82
Sox3P53784 Gm29610-201ENSMUST00000187749 453 ntBASIC3.71□□□□□ -1.82
Sox3P53784 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC3.71□□□□□ -1.82
Sox3P53784 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC3.71□□□□□ -1.82
Sox3P53784 Gm7142-201ENSMUST00000194232 586 ntBASIC3.71□□□□□ -1.82
Sox3P53784 Gm43217-201ENSMUST00000199513 367 ntBASIC3.71□□□□□ -1.82
Sox3P53784 Gm43424-201ENSMUST00000200484 253 ntBASIC3.71□□□□□ -1.82
Sox3P53784 Gm32381-201ENSMUST00000203192 476 ntBASIC3.71□□□□□ -1.82
Sox3P53784 Gm44088-201ENSMUST00000204595 237 ntBASIC3.71□□□□□ -1.82
Sox3P53784 Gm45735-201ENSMUST00000212779 319 ntBASIC3.71□□□□□ -1.82
Sox3P53784 AC161250.1-201ENSMUST00000213426 1111 ntBASIC3.71□□□□□ -1.82
Sox3P53784 AC153532.1-201ENSMUST00000218126 1111 ntBASIC3.71□□□□□ -1.82
Sox3P53784 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC3.71□□□□□ -1.82
Sox3P53784 AC129219.3-201ENSMUST00000223790 196 ntBASIC3.71□□□□□ -1.82
Sox3P53784 AC154727.1-201ENSMUST00000226537 499 ntBASIC3.71□□□□□ -1.82
Sox3P53784 AC099612.2-201ENSMUST00000226824 721 ntBASIC3.71□□□□□ -1.82
Sox3P53784 Olfr855-201ENSMUST00000061693 992 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Sox3P53784 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Sox3P53784 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Sox3P53784 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Sox3P53784 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
Sox3P53784 Gm26696-201ENSMUST00000181941 2848 ntBASIC3.71□□□□□ -1.82
Sox3P53784 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
Sox3P53784 Gm28359-201ENSMUST00000187470 1322 ntBASIC3.7□□□□□ -1.82
Sox3P53784 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Sox3P53784 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Sox3P53784 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Sox3P53784 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Sox3P53784 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
Sox3P53784 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Sox3P53784 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
Sox3P53784 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Sox3P53784 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Sox3P53784 Gm13607-201ENSMUST00000117875 539 ntBASIC3.7□□□□□ -1.82
Sox3P53784 Gm13478-201ENSMUST00000118312 413 ntBASIC3.7□□□□□ -1.82
Sox3P53784 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC3.7□□□□□ -1.82
Sox3P53784 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC3.7□□□□□ -1.82
Sox3P53784 Gm25105-201ENSMUST00000122477 130 ntBASIC3.7□□□□□ -1.82
Sox3P53784 Gm22480-201ENSMUST00000122568 128 ntBASIC3.7□□□□□ -1.82
Sox3P53784 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Sox3P53784 Gm23960-201ENSMUST00000157206 131 ntBASIC3.7□□□□□ -1.82
Sox3P53784 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Sox3P53784 Gm27392-201ENSMUST00000185041 101 ntBASIC3.7□□□□□ -1.82
Sox3P53784 Gm29554-201ENSMUST00000187922 821 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Sox3P53784 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC3.7□□□□□ -1.82
Sox3P53784 Gm28625-201ENSMUST00000188309 205 ntBASIC3.7□□□□□ -1.82
Sox3P53784 Gm9775-201ENSMUST00000189402 331 ntBASIC3.7□□□□□ -1.82
Sox3P53784 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Sox3P53784 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC3.7□□□□□ -1.82
Sox3P53784 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC3.7□□□□□ -1.82
Sox3P53784 Gm36943-201ENSMUST00000194422 282 ntBASIC3.7□□□□□ -1.82
Sox3P53784 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC3.7□□□□□ -1.82
Sox3P53784 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC3.7□□□□□ -1.82
Sox3P53784 Gm35702-201ENSMUST00000198653 511 ntBASIC3.7□□□□□ -1.82
Sox3P53784 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC3.7□□□□□ -1.82
Sox3P53784 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC3.7□□□□□ -1.82
Sox3P53784 Gm44600-201ENSMUST00000208540 111 ntBASIC3.7□□□□□ -1.82
Sox3P53784 Gm45344-201ENSMUST00000211610 341 ntBASIC3.7□□□□□ -1.82
Sox3P53784 Gm19219-201ENSMUST00000215863 724 ntBASIC3.7□□□□□ -1.82
Sox3P53784 Olfr1291-ps1-202ENSMUST00000219064 897 ntBASIC3.7□□□□□ -1.82
Sox3P53784 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC3.7□□□□□ -1.82
Sox3P53784 AC173482.1-201ENSMUST00000224494 3815 ntBASIC3.7□□□□□ -1.82
Sox3P53784 AC117656.3-205ENSMUST00000224606 1205 ntBASIC3.7□□□□□ -1.82
Sox3P53784 AC137871.2-201ENSMUST00000226482 289 ntBASIC3.7□□□□□ -1.82
Sox3P53784 E330017A01Rik-201ENSMUST00000053249 1108 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Sox3P53784 Olfr844-201ENSMUST00000054106 930 ntBASIC3.7□□□□□ -1.82
Sox3P53784 Gm10237-201ENSMUST00000078393 273 ntBASIC3.7□□□□□ -1.82
Sox3P53784 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Sox3P53784 AC101945.4-201ENSMUST00000228464 1976 ntBASIC3.7□□□□□ -1.82
Sox3P53784 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Sox3P53784 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Sox3P53784 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Sox3P53784 Gm37478-201ENSMUST00000193624 3495 ntBASIC3.69□□□□□ -1.82
Sox3P53784 Gm45033-201ENSMUST00000206710 3167 ntBASIC3.69□□□□□ -1.82
Sox3P53784 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC3.69□□□□□ -1.82
Sox3P53784 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms