Protein–RNA interactions for Protein: P28357

Hoxd9, Homeobox protein Hox-D9, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd9P28357 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxd9P28357 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxd9P28357 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Hoxd9P28357 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxd9P28357 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Hoxd9P28357 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Hoxd9P28357 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
Hoxd9P28357 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Hoxd9P28357 CT025604.1-201ENSMUST00000221111 3436 ntBASIC5.41□□□□□ -1.54
Hoxd9P28357 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Hoxd9P28357 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Hoxd9P28357 Gm38067-201ENSMUST00000192346 1911 ntBASIC5.41□□□□□ -1.54
Hoxd9P28357 AC121870.1-201ENSMUST00000216279 4879 ntBASIC5.41□□□□□ -1.54
Hoxd9P28357 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Hoxd9P28357 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Hoxd9P28357 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Hoxd9P28357 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Hoxd9P28357 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
Hoxd9P28357 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC5.41□□□□□ -1.54
Hoxd9P28357 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC5.41□□□□□ -1.54
Hoxd9P28357 Gm14049-201ENSMUST00000121009 636 ntBASIC5.41□□□□□ -1.54
Hoxd9P28357 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC5.41□□□□□ -1.54
Hoxd9P28357 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC5.41□□□□□ -1.54
Hoxd9P28357 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC5.41□□□□□ -1.54
Hoxd9P28357 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC5.41□□□□□ -1.54
Hoxd9P28357 Gm22037-201ENSMUST00000157280 296 ntBASIC5.41□□□□□ -1.54
Hoxd9P28357 Mir1945-201ENSMUST00000157919 78 ntBASIC5.41□□□□□ -1.54
Hoxd9P28357 Gm24395-201ENSMUST00000158139 125 ntBASIC5.41□□□□□ -1.54
Hoxd9P28357 Ear-ps4-201ENSMUST00000166834 450 ntBASIC5.41□□□□□ -1.54
Hoxd9P28357 Gm24819-201ENSMUST00000175094 166 ntBASIC5.41□□□□□ -1.54
Hoxd9P28357 Mir3097-201ENSMUST00000175356 67 ntBASIC5.41□□□□□ -1.54
Hoxd9P28357 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Hoxd9P28357 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC5.41□□□□□ -1.54
Hoxd9P28357 Gm29014-201ENSMUST00000191422 326 ntBASIC5.41□□□□□ -1.54
Hoxd9P28357 Gm18964-201ENSMUST00000193013 563 ntBASIC5.41□□□□□ -1.54
Hoxd9P28357 Gm44431-201ENSMUST00000203500 413 ntBASIC5.41□□□□□ -1.54
Hoxd9P28357 Gm17988-201ENSMUST00000208796 535 ntBASIC5.41□□□□□ -1.54
Hoxd9P28357 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Hoxd9P28357 AC158803.1-201ENSMUST00000219495 316 ntBASIC5.41□□□□□ -1.54
Hoxd9P28357 AC125531.1-201ENSMUST00000219849 221 ntBASIC5.41□□□□□ -1.54
Hoxd9P28357 Gm18921-201ENSMUST00000221798 366 ntBASIC5.41□□□□□ -1.54
Hoxd9P28357 Gm7042-201ENSMUST00000223027 384 ntBASIC5.41□□□□□ -1.54
Hoxd9P28357 AC126554.2-201ENSMUST00000223259 400 ntBASIC5.41□□□□□ -1.54
Hoxd9P28357 AC125405.1-201ENSMUST00000226406 589 ntBASIC5.41□□□□□ -1.54
Hoxd9P28357 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Hoxd9P28357 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC5.41□□□□□ -1.54
Hoxd9P28357 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Hoxd9P28357 Olfr1085-203ENSMUST00000214566 5129 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Hoxd9P28357 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Hoxd9P28357 Gm37686-201ENSMUST00000194099 2309 ntBASIC5.41□□□□□ -1.54
Hoxd9P28357 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Hoxd9P28357 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Hoxd9P28357 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Hoxd9P28357 Gm37221-201ENSMUST00000194472 3007 ntBASIC5.4□□□□□ -1.54
Hoxd9P28357 Gm38036-201ENSMUST00000194586 3564 ntBASIC5.4□□□□□ -1.54
Hoxd9P28357 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Hoxd9P28357 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Hoxd9P28357 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Hoxd9P28357 Gm13119-201ENSMUST00000094526 2094 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Hoxd9P28357 C87499-202ENSMUST00000107142 672 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
Hoxd9P28357 Gm22194-201ENSMUST00000116869 95 ntBASIC5.4□□□□□ -1.54
Hoxd9P28357 Gm14359-201ENSMUST00000118883 424 ntBASIC5.4□□□□□ -1.54
Hoxd9P28357 Gm8430-201ENSMUST00000119780 471 ntBASIC5.4□□□□□ -1.54
Hoxd9P28357 Gm16423-201ENSMUST00000120078 947 ntBASIC5.4□□□□□ -1.54
Hoxd9P28357 Gm14287-201ENSMUST00000121060 117 ntBASIC5.4□□□□□ -1.54
Hoxd9P28357 Gm13007-201ENSMUST00000121866 365 ntBASIC5.4□□□□□ -1.54
Hoxd9P28357 Gm15986-201ENSMUST00000122153 400 ntBASIC5.4□□□□□ -1.54
Hoxd9P28357 Gm22959-201ENSMUST00000122514 303 ntBASIC5.4□□□□□ -1.54
Hoxd9P28357 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC5.4□□□□□ -1.54
Hoxd9P28357 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC5.4□□□□□ -1.54
Hoxd9P28357 Gm7953-201ENSMUST00000168278 469 ntBASIC5.4□□□□□ -1.54
Hoxd9P28357 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Hoxd9P28357 Gm17020-201ENSMUST00000172274 274 ntBASIC5.4□□□□□ -1.54
Hoxd9P28357 Mir3572-201ENSMUST00000175549 86 ntBASIC5.4□□□□□ -1.54
Hoxd9P28357 Gm27854-201ENSMUST00000175578 244 ntBASIC5.4□□□□□ -1.54
Hoxd9P28357 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC5.4□□□□□ -1.54
Hoxd9P28357 Gm23402-201ENSMUST00000178130 107 ntBASIC5.4□□□□□ -1.54
Hoxd9P28357 Gm26189-201ENSMUST00000179879 107 ntBASIC5.4□□□□□ -1.54
Hoxd9P28357 Gm27030-201ENSMUST00000182551 464 ntBASIC5.4□□□□□ -1.54
Hoxd9P28357 Gm27960-201ENSMUST00000183445 184 ntBASIC5.4□□□□□ -1.54
Hoxd9P28357 Mir7653-201ENSMUST00000184358 61 ntBASIC5.4□□□□□ -1.54
Hoxd9P28357 Gm27679-201ENSMUST00000184612 84 ntBASIC5.4□□□□□ -1.54
Hoxd9P28357 Gm28640-201ENSMUST00000190918 550 ntBASIC5.4□□□□□ -1.54
Hoxd9P28357 Gm37338-201ENSMUST00000191986 127 ntBASIC5.4□□□□□ -1.54
Hoxd9P28357 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC5.4□□□□□ -1.54
Hoxd9P28357 Gm29785-201ENSMUST00000217033 383 ntBASIC5.4□□□□□ -1.54
Hoxd9P28357 AC134254.2-201ENSMUST00000221262 170 ntBASIC5.4□□□□□ -1.54
Hoxd9P28357 Gm4012-201ENSMUST00000221504 581 ntBASIC5.4□□□□□ -1.54
Hoxd9P28357 AC153794.2-201ENSMUST00000222650 550 ntBASIC5.4□□□□□ -1.54
Hoxd9P28357 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Hoxd9P28357 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC5.4□□□□□ -1.54
Hoxd9P28357 Gm26228-201ENSMUST00000082512 107 ntBASIC5.4□□□□□ -1.54
Hoxd9P28357 Gm25080-201ENSMUST00000082526 107 ntBASIC5.4□□□□□ -1.54
Hoxd9P28357 Gm25518-201ENSMUST00000083864 107 ntBASIC5.4□□□□□ -1.54
Hoxd9P28357 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC5.4□□□□□ -1.55
Hoxd9P28357 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Hoxd9P28357 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Hoxd9P28357 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC5.4□□□□□ -1.55
Hoxd9P28357 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.55
Hoxd9P28357 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms