Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
Trim39Q9ESN2 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Trim39Q9ESN2 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Trim39Q9ESN2 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Trim39Q9ESN2 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Trim39Q9ESN2 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Trim39Q9ESN2 Gm3604-201ENSMUST00000107989 1677 ntTSL 5 BASIC5.37□□□□□ -1.55
Trim39Q9ESN2 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Trim39Q9ESN2 AW046200-203ENSMUST00000211787 2479 ntBASIC5.37□□□□□ -1.55
Trim39Q9ESN2 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Trim39Q9ESN2 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Trim39Q9ESN2 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Trim39Q9ESN2 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
Trim39Q9ESN2 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC5.37□□□□□ -1.55
Trim39Q9ESN2 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Trim39Q9ESN2 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Trim39Q9ESN2 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Trim39Q9ESN2 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC5.37□□□□□ -1.55
Trim39Q9ESN2 Gm38299-201ENSMUST00000193214 3789 ntBASIC5.37□□□□□ -1.55
Trim39Q9ESN2 Gm11582-201ENSMUST00000121041 236 ntBASIC5.37□□□□□ -1.55
Trim39Q9ESN2 Gm26346-201ENSMUST00000157525 329 ntBASIC5.37□□□□□ -1.55
Trim39Q9ESN2 Gm24784-201ENSMUST00000157640 62 ntBASIC5.37□□□□□ -1.55
Trim39Q9ESN2 Gm23779-201ENSMUST00000157938 64 ntBASIC5.37□□□□□ -1.55
Trim39Q9ESN2 Gm25555-201ENSMUST00000158078 111 ntBASIC5.37□□□□□ -1.55
Trim39Q9ESN2 Gm25362-201ENSMUST00000158854 105 ntBASIC5.37□□□□□ -1.55
Trim39Q9ESN2 Gm16102-201ENSMUST00000160955 420 ntBASIC5.37□□□□□ -1.55
Trim39Q9ESN2 Gm3027-201ENSMUST00000167579 451 ntBASIC5.37□□□□□ -1.55
Trim39Q9ESN2 Gm3104-201ENSMUST00000171004 473 ntBASIC5.37□□□□□ -1.55
Trim39Q9ESN2 Gm25065-201ENSMUST00000177914 132 ntBASIC5.37□□□□□ -1.55
Trim39Q9ESN2 Gm22448-201ENSMUST00000179254 107 ntBASIC5.37□□□□□ -1.55
Trim39Q9ESN2 Gm25939-201ENSMUST00000179876 191 ntBASIC5.37□□□□□ -1.55
Trim39Q9ESN2 Gm25891-201ENSMUST00000180050 132 ntBASIC5.37□□□□□ -1.55
Trim39Q9ESN2 Gm28967-201ENSMUST00000187351 281 ntBASIC5.37□□□□□ -1.55
Trim39Q9ESN2 Gm37503-201ENSMUST00000192088 319 ntBASIC5.37□□□□□ -1.55
Trim39Q9ESN2 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC5.37□□□□□ -1.55
Trim39Q9ESN2 Gm45395-201ENSMUST00000209891 559 ntBASIC5.37□□□□□ -1.55
Trim39Q9ESN2 Gm46327-201ENSMUST00000218240 365 ntBASIC5.37□□□□□ -1.55
Trim39Q9ESN2 AC126685.1-201ENSMUST00000221001 121 ntBASIC5.37□□□□□ -1.55
Trim39Q9ESN2 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC5.37□□□□□ -1.55
Trim39Q9ESN2 AC154576.1-201ENSMUST00000225864 563 ntBASIC5.37□□□□□ -1.55
Trim39Q9ESN2 AC163664.2-201ENSMUST00000228894 459 ntBASIC5.37□□□□□ -1.55
Trim39Q9ESN2 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Trim39Q9ESN2 Gm24200-201ENSMUST00000082955 157 ntBASIC5.37□□□□□ -1.55
Trim39Q9ESN2 Gm23848-201ENSMUST00000083826 106 ntBASIC5.37□□□□□ -1.55
Trim39Q9ESN2 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC5.37□□□□□ -1.55
Trim39Q9ESN2 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Trim39Q9ESN2 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Trim39Q9ESN2 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Trim39Q9ESN2 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Trim39Q9ESN2 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Trim39Q9ESN2 Gm20345-201ENSMUST00000175839 2414 ntBASIC5.37□□□□□ -1.55
Trim39Q9ESN2 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
Trim39Q9ESN2 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC5.37□□□□□ -1.55
Trim39Q9ESN2 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC5.37□□□□□ -1.55
Trim39Q9ESN2 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Trim39Q9ESN2 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Trim39Q9ESN2 Gm42869-201ENSMUST00000199953 2121 ntBASIC5.36□□□□□ -1.55
Trim39Q9ESN2 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Trim39Q9ESN2 Gm37766-201ENSMUST00000192244 2567 ntBASIC5.36□□□□□ -1.55
Trim39Q9ESN2 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Trim39Q9ESN2 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Trim39Q9ESN2 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Trim39Q9ESN2 Gm37101-201ENSMUST00000191656 3660 ntBASIC5.36□□□□□ -1.55
Trim39Q9ESN2 Tex48-201ENSMUST00000102861 677 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Trim39Q9ESN2 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Trim39Q9ESN2 Gm24120-201ENSMUST00000103978 129 ntBASIC5.36□□□□□ -1.55
Trim39Q9ESN2 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC5.36□□□□□ -1.55
Trim39Q9ESN2 Gm14013-201ENSMUST00000119006 270 ntBASIC5.36□□□□□ -1.55
Trim39Q9ESN2 Gm13518-201ENSMUST00000120018 233 ntBASIC5.36□□□□□ -1.55
Trim39Q9ESN2 Gm15618-201ENSMUST00000121610 452 ntBASIC5.36□□□□□ -1.55
Trim39Q9ESN2 Mir1900-201ENSMUST00000122714 78 ntBASIC5.36□□□□□ -1.55
Trim39Q9ESN2 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC5.36□□□□□ -1.55
Trim39Q9ESN2 Gm25117-201ENSMUST00000157194 144 ntBASIC5.36□□□□□ -1.55
Trim39Q9ESN2 Gm23903-201ENSMUST00000157566 131 ntBASIC5.36□□□□□ -1.55
Trim39Q9ESN2 Gm25363-201ENSMUST00000158850 245 ntBASIC5.36□□□□□ -1.55
Trim39Q9ESN2 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC5.36□□□□□ -1.55
Trim39Q9ESN2 Gm7953-201ENSMUST00000168278 469 ntBASIC5.36□□□□□ -1.55
Trim39Q9ESN2 Gm20620-201ENSMUST00000177528 168 ntBASIC5.36□□□□□ -1.55
Trim39Q9ESN2 Gm24713-201ENSMUST00000178850 107 ntBASIC5.36□□□□□ -1.55
Trim39Q9ESN2 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Trim39Q9ESN2 Gm25361-201ENSMUST00000179358 76 ntBASIC5.36□□□□□ -1.55
Trim39Q9ESN2 Gm24863-201ENSMUST00000179499 107 ntBASIC5.36□□□□□ -1.55
Trim39Q9ESN2 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Trim39Q9ESN2 Gm25448-201ENSMUST00000180065 107 ntBASIC5.36□□□□□ -1.55
Trim39Q9ESN2 Gm24518-201ENSMUST00000180275 94 ntBASIC5.36□□□□□ -1.55
Trim39Q9ESN2 Gm27004-201ENSMUST00000183300 727 ntBASIC5.36□□□□□ -1.55
Trim39Q9ESN2 Gm37817-201ENSMUST00000195276 434 ntBASIC5.36□□□□□ -1.55
Trim39Q9ESN2 Gm42672-201ENSMUST00000197821 352 ntBASIC5.36□□□□□ -1.55
Trim39Q9ESN2 Gm2602-201ENSMUST00000202112 571 ntBASIC5.36□□□□□ -1.55
Trim39Q9ESN2 Gm44475-201ENSMUST00000204041 424 ntBASIC5.36□□□□□ -1.55
Trim39Q9ESN2 Gm18850-201ENSMUST00000211578 388 ntBASIC5.36□□□□□ -1.55
Trim39Q9ESN2 Gm45616-201ENSMUST00000211711 319 ntBASIC5.36□□□□□ -1.55
Trim39Q9ESN2 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Trim39Q9ESN2 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC5.36□□□□□ -1.55
Trim39Q9ESN2 AC090496.1-201ENSMUST00000226020 260 ntBASIC5.36□□□□□ -1.55
Trim39Q9ESN2 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Trim39Q9ESN2 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Trim39Q9ESN2 Gm22169-201ENSMUST00000083229 107 ntBASIC5.36□□□□□ -1.55
Trim39Q9ESN2 Gm26263-201ENSMUST00000083281 164 ntBASIC5.36□□□□□ -1.55
Trim39Q9ESN2 Olfr713-201ENSMUST00000098139 975 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 100.5 ms