Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Gm25480-201ENSMUST00000083217 133 ntBASIC3.58□□□□□ -1.84
Ccdc3Q9D6Y1 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Ccdc3Q9D6Y1 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Ccdc3Q9D6Y1 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
Ccdc3Q9D6Y1 Gm37655-201ENSMUST00000193968 4123 ntBASIC3.58□□□□□ -1.84
Ccdc3Q9D6Y1 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Ccdc3Q9D6Y1 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Ccdc3Q9D6Y1 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Ccdc3Q9D6Y1 Gm38212-201ENSMUST00000194081 2756 ntBASIC3.57□□□□□ -1.84
Ccdc3Q9D6Y1 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Ccdc3Q9D6Y1 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.57□□□□□ -1.84
Ccdc3Q9D6Y1 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
Ccdc3Q9D6Y1 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC3.57□□□□□ -1.84
Ccdc3Q9D6Y1 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Ccdc3Q9D6Y1 Gm23697-201ENSMUST00000103897 110 ntBASIC3.57□□□□□ -1.84
Ccdc3Q9D6Y1 Gm5943-201ENSMUST00000119458 459 ntBASIC3.57□□□□□ -1.84
Ccdc3Q9D6Y1 Gm13788-201ENSMUST00000120767 601 ntBASIC3.57□□□□□ -1.84
Ccdc3Q9D6Y1 Gm23123-201ENSMUST00000157648 144 ntBASIC3.57□□□□□ -1.84
Ccdc3Q9D6Y1 Gm24534-201ENSMUST00000157949 291 ntBASIC3.57□□□□□ -1.84
Ccdc3Q9D6Y1 Gm26355-201ENSMUST00000158220 105 ntBASIC3.57□□□□□ -1.84
Ccdc3Q9D6Y1 Gm24727-201ENSMUST00000158231 144 ntBASIC3.57□□□□□ -1.84
Ccdc3Q9D6Y1 Gm25835-201ENSMUST00000158917 144 ntBASIC3.57□□□□□ -1.84
Ccdc3Q9D6Y1 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
Ccdc3Q9D6Y1 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
Ccdc3Q9D6Y1 Gm10074-201ENSMUST00000174543 249 ntBASIC3.57□□□□□ -1.84
Ccdc3Q9D6Y1 Gm23633-201ENSMUST00000175293 119 ntBASIC3.57□□□□□ -1.84
Ccdc3Q9D6Y1 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC3.57□□□□□ -1.84
Ccdc3Q9D6Y1 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC3.57□□□□□ -1.84
Ccdc3Q9D6Y1 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
Ccdc3Q9D6Y1 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC3.57□□□□□ -1.84
Ccdc3Q9D6Y1 Gm28920-201ENSMUST00000189957 699 ntBASIC3.57□□□□□ -1.84
Ccdc3Q9D6Y1 Gm37887-201ENSMUST00000192752 2716 ntBASIC3.57□□□□□ -1.84
Ccdc3Q9D6Y1 Trbv8-201ENSMUST00000194020 285 ntBASIC3.57□□□□□ -1.84
Ccdc3Q9D6Y1 Gm37006-201ENSMUST00000195253 2674 ntBASIC3.57□□□□□ -1.84
Ccdc3Q9D6Y1 Gm44120-201ENSMUST00000203022 3023 ntBASIC3.57□□□□□ -1.84
Ccdc3Q9D6Y1 Gm44972-201ENSMUST00000206419 406 ntBASIC3.57□□□□□ -1.84
Ccdc3Q9D6Y1 Gm44824-201ENSMUST00000207021 229 ntBASIC3.57□□□□□ -1.84
Ccdc3Q9D6Y1 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC3.57□□□□□ -1.84
Ccdc3Q9D6Y1 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC3.57□□□□□ -1.84
Ccdc3Q9D6Y1 AC147615.2-201ENSMUST00000219876 2154 ntBASIC3.57□□□□□ -1.84
Ccdc3Q9D6Y1 AC138401.2-201ENSMUST00000220461 365 ntBASIC3.57□□□□□ -1.84
Ccdc3Q9D6Y1 Gm21007-201ENSMUST00000221024 326 ntBASIC3.57□□□□□ -1.84
Ccdc3Q9D6Y1 CT010506.3-201ENSMUST00000223699 410 ntBASIC3.57□□□□□ -1.84
Ccdc3Q9D6Y1 AC158981.3-201ENSMUST00000226844 1024 ntBASIC3.57□□□□□ -1.84
Ccdc3Q9D6Y1 Creg1-201ENSMUST00000040298 425 ntTSL 3 BASIC3.57□□□□□ -1.84
Ccdc3Q9D6Y1 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Ccdc3Q9D6Y1 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Ccdc3Q9D6Y1 Olfr725-201ENSMUST00000089844 1110 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Ccdc3Q9D6Y1 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Ccdc3Q9D6Y1 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Ccdc3Q9D6Y1 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Ccdc3Q9D6Y1 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Ccdc3Q9D6Y1 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Ccdc3Q9D6Y1 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Ccdc3Q9D6Y1 Gm44435-201ENSMUST00000204379 4119 ntBASIC3.56□□□□□ -1.84
Ccdc3Q9D6Y1 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
Ccdc3Q9D6Y1 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Ccdc3Q9D6Y1 Olfr826-202ENSMUST00000203720 1535 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Ccdc3Q9D6Y1 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Ccdc3Q9D6Y1 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Ccdc3Q9D6Y1 Gm37407-201ENSMUST00000194793 1316 ntBASIC3.56□□□□□ -1.84
Ccdc3Q9D6Y1 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Ccdc3Q9D6Y1 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Ccdc3Q9D6Y1 Gm12757-201ENSMUST00000119465 800 ntBASIC3.56□□□□□ -1.84
Ccdc3Q9D6Y1 Gm9043-201ENSMUST00000119677 314 ntBASIC3.56□□□□□ -1.84
Ccdc3Q9D6Y1 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC3.56□□□□□ -1.84
Ccdc3Q9D6Y1 Gm25606-201ENSMUST00000158363 95 ntBASIC3.56□□□□□ -1.84
Ccdc3Q9D6Y1 Gm25535-201ENSMUST00000175364 125 ntBASIC3.56□□□□□ -1.84
Ccdc3Q9D6Y1 Vmn2r-ps121-201ENSMUST00000176230 802 ntBASIC3.56□□□□□ -1.84
Ccdc3Q9D6Y1 Gm28010-201ENSMUST00000179485 126 ntBASIC3.56□□□□□ -1.84
Ccdc3Q9D6Y1 Mir7578-201ENSMUST00000183455 82 ntBASIC3.56□□□□□ -1.84
Ccdc3Q9D6Y1 Gm28655-201ENSMUST00000191538 692 ntBASIC3.56□□□□□ -1.84
Ccdc3Q9D6Y1 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC3.56□□□□□ -1.84
Ccdc3Q9D6Y1 Gm43841-201ENSMUST00000199491 586 ntBASIC3.56□□□□□ -1.84
Ccdc3Q9D6Y1 Gm2189-201ENSMUST00000201419 429 ntBASIC3.56□□□□□ -1.84
Ccdc3Q9D6Y1 Gm44475-201ENSMUST00000204041 424 ntBASIC3.56□□□□□ -1.84
Ccdc3Q9D6Y1 Gm44703-201ENSMUST00000205724 248 ntBASIC3.56□□□□□ -1.84
Ccdc3Q9D6Y1 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC3.56□□□□□ -1.84
Ccdc3Q9D6Y1 Gm18903-201ENSMUST00000215343 480 ntBASIC3.56□□□□□ -1.84
Ccdc3Q9D6Y1 CT025680.1-201ENSMUST00000217375 375 ntBASIC3.56□□□□□ -1.84
Ccdc3Q9D6Y1 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC3.56□□□□□ -1.84
Ccdc3Q9D6Y1 AC162934.1-201ENSMUST00000222880 309 ntBASIC3.56□□□□□ -1.84
Ccdc3Q9D6Y1 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC3.56□□□□□ -1.84
Ccdc3Q9D6Y1 AC154510.1-201ENSMUST00000223925 737 ntBASIC3.56□□□□□ -1.84
Ccdc3Q9D6Y1 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Ccdc3Q9D6Y1 Olfr488-201ENSMUST00000072968 945 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Ccdc3Q9D6Y1 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Ccdc3Q9D6Y1 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Ccdc3Q9D6Y1 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Ccdc3Q9D6Y1 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Ccdc3Q9D6Y1 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Ccdc3Q9D6Y1 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Ccdc3Q9D6Y1 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Ccdc3Q9D6Y1 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
Ccdc3Q9D6Y1 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Ccdc3Q9D6Y1 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Ccdc3Q9D6Y1 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Ccdc3Q9D6Y1 Gm15148-201ENSMUST00000117602 156 ntBASIC3.55□□□□□ -1.84
Ccdc3Q9D6Y1 Gm11746-201ENSMUST00000119843 821 ntBASIC3.55□□□□□ -1.84
Ccdc3Q9D6Y1 Gm12873-201ENSMUST00000119988 422 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 105 ms