Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Trim28Q62318 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC5.6□□□□□ -1.51
Trim28Q62318 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC5.6□□□□□ -1.51
Trim28Q62318 Gm44543-201ENSMUST00000209136 396 ntBASIC5.6□□□□□ -1.51
Trim28Q62318 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC5.6□□□□□ -1.51
Trim28Q62318 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC5.6□□□□□ -1.51
Trim28Q62318 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC5.6□□□□□ -1.51
Trim28Q62318 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC5.6□□□□□ -1.51
Trim28Q62318 AC139376.1-201ENSMUST00000220056 1250 ntBASIC5.6□□□□□ -1.51
Trim28Q62318 Gm2544-201ENSMUST00000222702 756 ntBASIC5.6□□□□□ -1.51
Trim28Q62318 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC5.6□□□□□ -1.51
Trim28Q62318 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Trim28Q62318 Mir202-201ENSMUST00000083568 72 ntBASIC5.6□□□□□ -1.51
Trim28Q62318 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Trim28Q62318 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC5.6□□□□□ -1.51
Trim28Q62318 Gm43605-201ENSMUST00000199663 3426 ntBASIC5.6□□□□□ -1.51
Trim28Q62318 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC5.6□□□□□ -1.51
Trim28Q62318 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC5.6□□□□□ -1.51
Trim28Q62318 Cd53-201ENSMUST00000038845 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Trim28Q62318 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Trim28Q62318 Gm30292-201ENSMUST00000194198 3000 ntTSL 3 BASIC5.59□□□□□ -1.51
Trim28Q62318 Olfr672-202ENSMUST00000213942 1490 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
Trim28Q62318 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Trim28Q62318 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
Trim28Q62318 Mpp5-201ENSMUST00000082024 5470 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Trim28Q62318 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Trim28Q62318 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC5.59□□□□□ -1.51
Trim28Q62318 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC5.59□□□□□ -1.51
Trim28Q62318 Gm11781-201ENSMUST00000118328 472 ntBASIC5.59□□□□□ -1.51
Trim28Q62318 Gm14516-201ENSMUST00000120012 252 ntBASIC5.59□□□□□ -1.51
Trim28Q62318 Gm14725-201ENSMUST00000120324 828 ntBASIC5.59□□□□□ -1.51
Trim28Q62318 Gm14939-201ENSMUST00000120347 680 ntBASIC5.59□□□□□ -1.51
Trim28Q62318 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC5.59□□□□□ -1.51
Trim28Q62318 Gm26373-201ENSMUST00000157833 103 ntBASIC5.59□□□□□ -1.51
Trim28Q62318 Gm23034-201ENSMUST00000158001 147 ntBASIC5.59□□□□□ -1.51
Trim28Q62318 Gm10074-201ENSMUST00000174543 249 ntBASIC5.59□□□□□ -1.51
Trim28Q62318 Gm26219-201ENSMUST00000175216 71 ntBASIC5.59□□□□□ -1.51
Trim28Q62318 Gm23379-201ENSMUST00000180026 107 ntBASIC5.59□□□□□ -1.51
Trim28Q62318 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Trim28Q62318 Gm27538-201ENSMUST00000185065 294 ntBASIC5.59□□□□□ -1.51
Trim28Q62318 Gm43505-201ENSMUST00000200579 139 ntBASIC5.59□□□□□ -1.51
Trim28Q62318 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Trim28Q62318 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC5.59□□□□□ -1.51
Trim28Q62318 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC5.59□□□□□ -1.51
Trim28Q62318 Gm4057-201ENSMUST00000221407 368 ntBASIC5.59□□□□□ -1.51
Trim28Q62318 Gm9628-201ENSMUST00000222169 725 ntBASIC5.59□□□□□ -1.51
Trim28Q62318 AC158521.1-201ENSMUST00000225295 660 ntBASIC5.59□□□□□ -1.51
Trim28Q62318 CT030182.3-201ENSMUST00000225986 582 ntBASIC5.59□□□□□ -1.51
Trim28Q62318 Gm26165-201ENSMUST00000083791 138 ntBASIC5.59□□□□□ -1.51
Trim28Q62318 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Trim28Q62318 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
Trim28Q62318 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Trim28Q62318 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Trim28Q62318 March1-203ENSMUST00000098708 4000 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
Trim28Q62318 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.52
Trim28Q62318 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
Trim28Q62318 Gm45804-201ENSMUST00000212137 3435 ntBASIC5.58□□□□□ -1.52
Trim28Q62318 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Trim28Q62318 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
Trim28Q62318 Gm19301-201ENSMUST00000174283 2210 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Trim28Q62318 Gm43921-201ENSMUST00000204296 1792 ntBASIC5.58□□□□□ -1.52
Trim28Q62318 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Trim28Q62318 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Trim28Q62318 Gm22269-201ENSMUST00000104002 130 ntBASIC5.58□□□□□ -1.52
Trim28Q62318 Gm14981-201ENSMUST00000117325 943 ntBASIC5.58□□□□□ -1.52
Trim28Q62318 Gm12173-201ENSMUST00000117622 273 ntBASIC5.58□□□□□ -1.52
Trim28Q62318 Gm14656-201ENSMUST00000120342 502 ntBASIC5.58□□□□□ -1.52
Trim28Q62318 Gm25104-201ENSMUST00000122476 163 ntBASIC5.58□□□□□ -1.52
Trim28Q62318 Gm16362-201ENSMUST00000135189 214 ntBASIC5.58□□□□□ -1.52
Trim28Q62318 Gm23981-201ENSMUST00000157136 106 ntBASIC5.58□□□□□ -1.52
Trim28Q62318 Gm6245-201ENSMUST00000164699 768 ntBASIC5.58□□□□□ -1.52
Trim28Q62318 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC5.58□□□□□ -1.52
Trim28Q62318 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC5.58□□□□□ -1.52
Trim28Q62318 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Trim28Q62318 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Trim28Q62318 Gm28094-201ENSMUST00000185262 390 ntBASIC5.58□□□□□ -1.52
Trim28Q62318 Gm7142-201ENSMUST00000194232 586 ntBASIC5.58□□□□□ -1.52
Trim28Q62318 Gm36259-201ENSMUST00000197340 392 ntBASIC5.58□□□□□ -1.52
Trim28Q62318 Gm35702-201ENSMUST00000198653 511 ntBASIC5.58□□□□□ -1.52
Trim28Q62318 AC161456.1-201ENSMUST00000206771 887 ntBASIC5.58□□□□□ -1.52
Trim28Q62318 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC5.58□□□□□ -1.52
Trim28Q62318 Gm8125-201ENSMUST00000216602 738 ntBASIC5.58□□□□□ -1.52
Trim28Q62318 CT030242.2-201ENSMUST00000221588 148 ntBASIC5.58□□□□□ -1.52
Trim28Q62318 AC132315.1-201ENSMUST00000221771 390 ntBASIC5.58□□□□□ -1.52
Trim28Q62318 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC5.58□□□□□ -1.52
Trim28Q62318 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim28Q62318 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Trim28Q62318 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim28Q62318 n-R5s85-201ENSMUST00000083453 113 ntBASIC5.58□□□□□ -1.52
Trim28Q62318 Gm23516-201ENSMUST00000093728 107 ntBASIC5.58□□□□□ -1.52
Trim28Q62318 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC5.58□□□□□ -1.52
Trim28Q62318 Gm37661-201ENSMUST00000191863 1550 ntBASIC5.58□□□□□ -1.52
Trim28Q62318 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Trim28Q62318 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Trim28Q62318 Dpp10-202ENSMUST00000112606 15297 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim28Q62318 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim28Q62318 Olfr1195-202ENSMUST00000213545 2585 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Trim28Q62318 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Trim28Q62318 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Trim28Q62318 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms