Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC3.86□□□□□ -1.79
Upf3bQ3ULL6 Gm7588-201ENSMUST00000216866 571 ntBASIC3.86□□□□□ -1.79
Upf3bQ3ULL6 Gm4036-201ENSMUST00000220842 626 ntBASIC3.86□□□□□ -1.79
Upf3bQ3ULL6 AC102815.1-201ENSMUST00000226662 1061 ntBASIC3.86□□□□□ -1.79
Upf3bQ3ULL6 Diaph3-206ENSMUST00000226745 713 ntBASIC3.86□□□□□ -1.79
Upf3bQ3ULL6 AC121898.1-201ENSMUST00000227599 288 ntBASIC3.86□□□□□ -1.79
Upf3bQ3ULL6 Olfr1112-201ENSMUST00000053050 957 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Upf3bQ3ULL6 Gm6462-201ENSMUST00000081488 304 ntBASIC3.86□□□□□ -1.79
Upf3bQ3ULL6 Gm25581-201ENSMUST00000083410 164 ntBASIC3.86□□□□□ -1.79
Upf3bQ3ULL6 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Upf3bQ3ULL6 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Upf3bQ3ULL6 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Upf3bQ3ULL6 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Upf3bQ3ULL6 Gm37652-201ENSMUST00000195290 2095 ntBASIC3.85□□□□□ -1.79
Upf3bQ3ULL6 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Upf3bQ3ULL6 Gm44164-201ENSMUST00000203605 2561 ntBASIC3.85□□□□□ -1.79
Upf3bQ3ULL6 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Upf3bQ3ULL6 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC3.85□□□□□ -1.79
Upf3bQ3ULL6 Gm24792-201ENSMUST00000104286 128 ntBASIC3.85□□□□□ -1.79
Upf3bQ3ULL6 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Upf3bQ3ULL6 Gm6797-201ENSMUST00000119440 512 ntBASIC3.85□□□□□ -1.79
Upf3bQ3ULL6 Gm11830-201ENSMUST00000120175 561 ntBASIC3.85□□□□□ -1.79
Upf3bQ3ULL6 Gm11233-201ENSMUST00000122357 634 ntBASIC3.85□□□□□ -1.79
Upf3bQ3ULL6 Gm25105-201ENSMUST00000122477 130 ntBASIC3.85□□□□□ -1.79
Upf3bQ3ULL6 Gm23257-201ENSMUST00000158322 132 ntBASIC3.85□□□□□ -1.79
Upf3bQ3ULL6 Gm27033-201ENSMUST00000183226 544 ntBASIC3.85□□□□□ -1.79
Upf3bQ3ULL6 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC3.85□□□□□ -1.79
Upf3bQ3ULL6 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC3.85□□□□□ -1.79
Upf3bQ3ULL6 Mir1892-201ENSMUST00000197752 80 ntBASIC3.85□□□□□ -1.79
Upf3bQ3ULL6 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Upf3bQ3ULL6 Gm44059-201ENSMUST00000204048 351 ntBASIC3.85□□□□□ -1.79
Upf3bQ3ULL6 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Upf3bQ3ULL6 Gm45327-201ENSMUST00000211612 565 ntBASIC3.85□□□□□ -1.79
Upf3bQ3ULL6 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC3.85□□□□□ -1.79
Upf3bQ3ULL6 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC3.85□□□□□ -1.79
Upf3bQ3ULL6 AC132237.2-201ENSMUST00000221702 1209 ntBASIC3.85□□□□□ -1.79
Upf3bQ3ULL6 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC3.85□□□□□ -1.79
Upf3bQ3ULL6 AC155237.2-201ENSMUST00000228487 478 ntBASIC3.85□□□□□ -1.79
Upf3bQ3ULL6 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
Upf3bQ3ULL6 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC3.85□□□□□ -1.79
Upf3bQ3ULL6 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
Upf3bQ3ULL6 Olfr798-201ENSMUST00000079810 936 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Upf3bQ3ULL6 Gm25480-201ENSMUST00000083217 133 ntBASIC3.85□□□□□ -1.79
Upf3bQ3ULL6 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Upf3bQ3ULL6 Gm7646-201ENSMUST00000198590 1346 ntBASIC3.85□□□□□ -1.79
Upf3bQ3ULL6 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC3.85□□□□□ -1.79
Upf3bQ3ULL6 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Upf3bQ3ULL6 Gm7957-201ENSMUST00000207404 2602 ntBASIC3.85□□□□□ -1.79
Upf3bQ3ULL6 Gm18432-201ENSMUST00000195568 1451 ntBASIC3.85□□□□□ -1.79
Upf3bQ3ULL6 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
Upf3bQ3ULL6 Gm7470-201ENSMUST00000194219 2095 ntBASIC3.85□□□□□ -1.79
Upf3bQ3ULL6 Gm37777-201ENSMUST00000195546 3366 ntBASIC3.85□□□□□ -1.79
Upf3bQ3ULL6 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
Upf3bQ3ULL6 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Upf3bQ3ULL6 AC159193.2-201ENSMUST00000220865 4251 ntBASIC3.84□□□□□ -1.79
Upf3bQ3ULL6 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Upf3bQ3ULL6 Gm15018-201ENSMUST00000117090 633 ntBASIC3.84□□□□□ -1.79
Upf3bQ3ULL6 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC3.84□□□□□ -1.79
Upf3bQ3ULL6 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC3.84□□□□□ -1.79
Upf3bQ3ULL6 Gm14559-201ENSMUST00000121745 496 ntBASIC3.84□□□□□ -1.79
Upf3bQ3ULL6 Gm24739-201ENSMUST00000158855 292 ntBASIC3.84□□□□□ -1.79
Upf3bQ3ULL6 Gm9890-201ENSMUST00000171867 537 ntBASIC3.84□□□□□ -1.79
Upf3bQ3ULL6 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Upf3bQ3ULL6 Mir6975-201ENSMUST00000184879 61 ntBASIC3.84□□□□□ -1.79
Upf3bQ3ULL6 Gm27427-201ENSMUST00000185134 193 ntBASIC3.84□□□□□ -1.79
Upf3bQ3ULL6 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Upf3bQ3ULL6 Gm38356-201ENSMUST00000194313 408 ntBASIC3.84□□□□□ -1.79
Upf3bQ3ULL6 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC3.84□□□□□ -1.79
Upf3bQ3ULL6 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC3.84□□□□□ -1.79
Upf3bQ3ULL6 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC3.84□□□□□ -1.79
Upf3bQ3ULL6 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Upf3bQ3ULL6 Gm34779-201ENSMUST00000210036 263 ntBASIC3.84□□□□□ -1.79
Upf3bQ3ULL6 Gm8748-201ENSMUST00000211125 587 ntBASIC3.84□□□□□ -1.79
Upf3bQ3ULL6 Gm34005-201ENSMUST00000215834 282 ntBASIC3.84□□□□□ -1.79
Upf3bQ3ULL6 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC3.84□□□□□ -1.79
Upf3bQ3ULL6 Gm18120-201ENSMUST00000220079 511 ntBASIC3.84□□□□□ -1.79
Upf3bQ3ULL6 Gm7119-201ENSMUST00000221345 695 ntBASIC3.84□□□□□ -1.79
Upf3bQ3ULL6 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC3.84□□□□□ -1.79
Upf3bQ3ULL6 AC158142.3-201ENSMUST00000226230 675 ntBASIC3.84□□□□□ -1.79
Upf3bQ3ULL6 AC133101.1-201ENSMUST00000226939 1199 ntBASIC3.84□□□□□ -1.79
Upf3bQ3ULL6 AC115291.2-201ENSMUST00000228335 437 ntBASIC3.84□□□□□ -1.79
Upf3bQ3ULL6 AC126690.1-201ENSMUST00000228898 397 ntBASIC3.84□□□□□ -1.79
Upf3bQ3ULL6 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Upf3bQ3ULL6 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Upf3bQ3ULL6 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Upf3bQ3ULL6 Olfr1098-201ENSMUST00000099872 948 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Upf3bQ3ULL6 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Upf3bQ3ULL6 Gm34069-201ENSMUST00000214060 2441 ntTSL 5 BASIC3.84□□□□□ -1.8
Upf3bQ3ULL6 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
Upf3bQ3ULL6 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Upf3bQ3ULL6 AC151831.1-201ENSMUST00000227609 4033 ntBASIC3.83□□□□□ -1.8
Upf3bQ3ULL6 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Upf3bQ3ULL6 Gm25420-201ENSMUST00000104216 127 ntBASIC3.83□□□□□ -1.8
Upf3bQ3ULL6 Gm14050-201ENSMUST00000117052 346 ntBASIC3.83□□□□□ -1.8
Upf3bQ3ULL6 Gm13314-201ENSMUST00000118742 335 ntBASIC3.83□□□□□ -1.8
Upf3bQ3ULL6 Gm12118-201ENSMUST00000119766 532 ntBASIC3.83□□□□□ -1.8
Upf3bQ3ULL6 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC3.83□□□□□ -1.8
Upf3bQ3ULL6 Gm12578-201ENSMUST00000121244 417 ntBASIC3.83□□□□□ -1.8
Upf3bQ3ULL6 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Upf3bQ3ULL6 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 119.6 ms