Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm29161-201ENSMUST00000188250 699 ntBASIC5.16□□□□□ -1.58
Cux1P53564 Gm44972-201ENSMUST00000206419 406 ntBASIC5.16□□□□□ -1.58
Cux1P53564 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC5.16□□□□□ -1.58
Cux1P53564 Gm4928-201ENSMUST00000219622 850 ntBASIC5.16□□□□□ -1.58
Cux1P53564 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC5.16□□□□□ -1.58
Cux1P53564 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Cux1P53564 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC5.16□□□□□ -1.58
Cux1P53564 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Cux1P53564 Gm37006-201ENSMUST00000195253 2674 ntBASIC5.16□□□□□ -1.58
Cux1P53564 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Cux1P53564 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Cux1P53564 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
Cux1P53564 AC153150.1-201ENSMUST00000226065 3782 ntBASIC5.15□□□□□ -1.58
Cux1P53564 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Cux1P53564 Gm14649-201ENSMUST00000121814 324 ntBASIC5.15□□□□□ -1.58
Cux1P53564 Gm12082-201ENSMUST00000138164 600 ntTSL 3 BASIC5.15□□□□□ -1.58
Cux1P53564 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC5.15□□□□□ -1.58
Cux1P53564 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC5.15□□□□□ -1.58
Cux1P53564 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC5.15□□□□□ -1.58
Cux1P53564 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC5.15□□□□□ -1.58
Cux1P53564 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC5.15□□□□□ -1.58
Cux1P53564 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC5.15□□□□□ -1.58
Cux1P53564 Igkv9-128-201ENSMUST00000196602 353 ntBASIC5.15□□□□□ -1.58
Cux1P53564 Gm42919-201ENSMUST00000197753 1284 ntBASIC5.15□□□□□ -1.58
Cux1P53564 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Cux1P53564 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Cux1P53564 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Cux1P53564 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Cux1P53564 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
Cux1P53564 AC160931.3-201ENSMUST00000222111 2267 ntBASIC5.14□□□□□ -1.59
Cux1P53564 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC5.14□□□□□ -1.59
Cux1P53564 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Cux1P53564 Gm14788-201ENSMUST00000119457 375 ntBASIC5.14□□□□□ -1.59
Cux1P53564 Gm23791-201ENSMUST00000122553 293 ntBASIC5.14□□□□□ -1.59
Cux1P53564 Gm22988-201ENSMUST00000122759 144 ntBASIC5.14□□□□□ -1.59
Cux1P53564 Gm24734-201ENSMUST00000158860 262 ntBASIC5.14□□□□□ -1.59
Cux1P53564 Mir5127-201ENSMUST00000175295 71 ntBASIC5.14□□□□□ -1.59
Cux1P53564 Gm7870-201ENSMUST00000184467 616 ntBASIC5.14□□□□□ -1.59
Cux1P53564 Gm45344-201ENSMUST00000211610 341 ntBASIC5.14□□□□□ -1.59
Cux1P53564 Gm45322-201ENSMUST00000211642 1361 ntBASIC5.14□□□□□ -1.59
Cux1P53564 Gm44049-201ENSMUST00000204905 2984 ntBASIC5.14□□□□□ -1.59
Cux1P53564 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
Cux1P53564 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Cux1P53564 Olfr1471-205ENSMUST00000217482 1545 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Cux1P53564 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC5.14□□□□□ -1.59
Cux1P53564 Gm12156-201ENSMUST00000119188 554 ntBASIC5.13□□□□□ -1.59
Cux1P53564 Gm15986-201ENSMUST00000122153 400 ntBASIC5.13□□□□□ -1.59
Cux1P53564 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Cux1P53564 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Cux1P53564 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC5.13□□□□□ -1.59
Cux1P53564 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC5.13□□□□□ -1.59
Cux1P53564 AC118230.1-201ENSMUST00000220196 656 ntBASIC5.13□□□□□ -1.59
Cux1P53564 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Cux1P53564 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC5.13□□□□□ -1.59
Cux1P53564 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Cux1P53564 Gm18719-201ENSMUST00000196696 1413 ntBASIC5.13□□□□□ -1.59
Cux1P53564 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Cux1P53564 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Cux1P53564 Gm9343-201ENSMUST00000209016 2609 ntBASIC5.13□□□□□ -1.59
Cux1P53564 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Cux1P53564 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Cux1P53564 Gm13443-201ENSMUST00000120770 555 ntBASIC5.13□□□□□ -1.59
Cux1P53564 Gm26088-201ENSMUST00000157896 131 ntBASIC5.13□□□□□ -1.59
Cux1P53564 Mir6398-201ENSMUST00000184541 102 ntBASIC5.13□□□□□ -1.59
Cux1P53564 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Cux1P53564 Gm18644-201ENSMUST00000211458 815 ntBASIC5.13□□□□□ -1.59
Cux1P53564 Gm6195-201ENSMUST00000063059 357 ntBASIC5.13□□□□□ -1.59
Cux1P53564 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Cux1P53564 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
Cux1P53564 Gm17187-201ENSMUST00000164622 410 ntBASIC5.12□□□□□ -1.59
Cux1P53564 Gm17421-201ENSMUST00000167845 674 ntBASIC5.12□□□□□ -1.59
Cux1P53564 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Cux1P53564 Gm18867-201ENSMUST00000198022 1179 ntBASIC5.12□□□□□ -1.59
Cux1P53564 Gm43443-201ENSMUST00000202337 2393 ntBASIC5.12□□□□□ -1.59
Cux1P53564 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC5.12□□□□□ -1.59
Cux1P53564 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Cux1P53564 Gm18225-201ENSMUST00000216708 742 ntBASIC5.12□□□□□ -1.59
Cux1P53564 AC117588.3-201ENSMUST00000228517 325 ntBASIC5.12□□□□□ -1.59
Cux1P53564 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Cux1P53564 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
Cux1P53564 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Cux1P53564 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Cux1P53564 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
Cux1P53564 Gm28710-202ENSMUST00000211738 2987 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Cux1P53564 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Cux1P53564 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Cux1P53564 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Cux1P53564 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Cux1P53564 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
Cux1P53564 Gm13788-201ENSMUST00000120767 601 ntBASIC5.11□□□□□ -1.59
Cux1P53564 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Cux1P53564 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC5.11□□□□□ -1.59
Cux1P53564 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC5.11□□□□□ -1.59
Cux1P53564 AC159885.1-201ENSMUST00000222221 199 ntBASIC5.11□□□□□ -1.59
Cux1P53564 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Cux1P53564 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Cux1P53564 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC5.11□□□□□ -1.59
Cux1P53564 Gm5362-201ENSMUST00000211968 3085 ntBASIC5.1□□□□□ -1.59
Cux1P53564 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
Cux1P53564 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms