Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm7312-201ENSMUST00000118798 469 ntBASIC4.76□□□□□ -1.65
Pcdh1F7BJK1 Gm12053-201ENSMUST00000119022 252 ntBASIC4.76□□□□□ -1.65
Pcdh1F7BJK1 Gm12244-201ENSMUST00000119500 291 ntBASIC4.76□□□□□ -1.65
Pcdh1F7BJK1 Gm7670-201ENSMUST00000121272 641 ntBASIC4.76□□□□□ -1.65
Pcdh1F7BJK1 Crem-224ENSMUST00000147138 436 ntTSL 5 BASIC4.76□□□□□ -1.65
Pcdh1F7BJK1 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Pcdh1F7BJK1 Gm25827-201ENSMUST00000157089 107 ntBASIC4.76□□□□□ -1.65
Pcdh1F7BJK1 Gm23280-201ENSMUST00000157905 139 ntBASIC4.76□□□□□ -1.65
Pcdh1F7BJK1 Gm22724-201ENSMUST00000158091 127 ntBASIC4.76□□□□□ -1.65
Pcdh1F7BJK1 Gm22675-201ENSMUST00000158430 104 ntBASIC4.76□□□□□ -1.65
Pcdh1F7BJK1 Gm24343-201ENSMUST00000158708 111 ntBASIC4.76□□□□□ -1.65
Pcdh1F7BJK1 Gm22530-201ENSMUST00000158820 118 ntBASIC4.76□□□□□ -1.65
Pcdh1F7BJK1 Gm23473-201ENSMUST00000158883 116 ntBASIC4.76□□□□□ -1.65
Pcdh1F7BJK1 Gm16566-201ENSMUST00000160387 910 ntBASIC4.76□□□□□ -1.65
Pcdh1F7BJK1 Gm6264-202ENSMUST00000162896 1217 ntBASIC4.76□□□□□ -1.65
Pcdh1F7BJK1 Ear-ps5-201ENSMUST00000164700 463 ntBASIC4.76□□□□□ -1.65
Pcdh1F7BJK1 Gm22411-201ENSMUST00000175462 126 ntBASIC4.76□□□□□ -1.65
Pcdh1F7BJK1 Gm22002-201ENSMUST00000175622 125 ntBASIC4.76□□□□□ -1.65
Pcdh1F7BJK1 Gm20673-201ENSMUST00000177167 430 ntBASIC4.76□□□□□ -1.65
Pcdh1F7BJK1 Gm7094-201ENSMUST00000178379 366 ntBASIC4.76□□□□□ -1.65
Pcdh1F7BJK1 Gm28008-201ENSMUST00000184021 186 ntBASIC4.76□□□□□ -1.65
Pcdh1F7BJK1 Gm28283-201ENSMUST00000185509 178 ntBASIC4.76□□□□□ -1.65
Pcdh1F7BJK1 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC4.76□□□□□ -1.65
Pcdh1F7BJK1 Gm28058-201ENSMUST00000186421 264 ntBASIC4.76□□□□□ -1.65
Pcdh1F7BJK1 Gm29064-201ENSMUST00000187014 813 ntBASIC4.76□□□□□ -1.65
Pcdh1F7BJK1 Gm5058-201ENSMUST00000187331 463 ntBASIC4.76□□□□□ -1.65
Pcdh1F7BJK1 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC4.76□□□□□ -1.65
Pcdh1F7BJK1 Gm28299-201ENSMUST00000189908 339 ntBASIC4.76□□□□□ -1.65
Pcdh1F7BJK1 Gm37743-201ENSMUST00000194645 376 ntBASIC4.76□□□□□ -1.65
Pcdh1F7BJK1 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC4.76□□□□□ -1.65
Pcdh1F7BJK1 Gm44074-201ENSMUST00000204562 337 ntBASIC4.76□□□□□ -1.65
Pcdh1F7BJK1 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC4.76□□□□□ -1.65
Pcdh1F7BJK1 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC4.76□□□□□ -1.65
Pcdh1F7BJK1 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC4.76□□□□□ -1.65
Pcdh1F7BJK1 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC4.76□□□□□ -1.65
Pcdh1F7BJK1 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Pcdh1F7BJK1 Olfr881-201ENSMUST00000074611 948 ntBASIC4.76□□□□□ -1.65
Pcdh1F7BJK1 Gm25008-201ENSMUST00000083809 81 ntBASIC4.76□□□□□ -1.65
Pcdh1F7BJK1 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Pcdh1F7BJK1 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Pcdh1F7BJK1 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC4.76□□□□□ -1.65
Pcdh1F7BJK1 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Pcdh1F7BJK1 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Pcdh1F7BJK1 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC4.75□□□□□ -1.65
Pcdh1F7BJK1 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Pcdh1F7BJK1 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Pcdh1F7BJK1 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Pcdh1F7BJK1 Gm37558-201ENSMUST00000193684 2983 ntBASIC4.75□□□□□ -1.65
Pcdh1F7BJK1 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Pcdh1F7BJK1 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Pcdh1F7BJK1 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Pcdh1F7BJK1 Epha7-201ENSMUST00000029964 6746 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
Pcdh1F7BJK1 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Pcdh1F7BJK1 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
Pcdh1F7BJK1 Gm13172-201ENSMUST00000118685 256 ntBASIC4.75□□□□□ -1.65
Pcdh1F7BJK1 Gm11625-201ENSMUST00000119535 296 ntBASIC4.75□□□□□ -1.65
Pcdh1F7BJK1 Gm14821-201ENSMUST00000121975 435 ntBASIC4.75□□□□□ -1.65
Pcdh1F7BJK1 Gm23211-201ENSMUST00000122717 308 ntBASIC4.75□□□□□ -1.65
Pcdh1F7BJK1 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC4.75□□□□□ -1.65
Pcdh1F7BJK1 Gm26489-201ENSMUST00000157880 264 ntBASIC4.75□□□□□ -1.65
Pcdh1F7BJK1 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC4.75□□□□□ -1.65
Pcdh1F7BJK1 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Pcdh1F7BJK1 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC4.75□□□□□ -1.65
Pcdh1F7BJK1 Gm25243-201ENSMUST00000174912 207 ntBASIC4.75□□□□□ -1.65
Pcdh1F7BJK1 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC4.75□□□□□ -1.65
Pcdh1F7BJK1 Gm23450-201ENSMUST00000178285 91 ntBASIC4.75□□□□□ -1.65
Pcdh1F7BJK1 Gm24957-201ENSMUST00000179604 132 ntBASIC4.75□□□□□ -1.65
Pcdh1F7BJK1 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC4.75□□□□□ -1.65
Pcdh1F7BJK1 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC4.75□□□□□ -1.65
Pcdh1F7BJK1 Gm18403-201ENSMUST00000192907 529 ntBASIC4.75□□□□□ -1.65
Pcdh1F7BJK1 Gm37715-201ENSMUST00000193206 235 ntBASIC4.75□□□□□ -1.65
Pcdh1F7BJK1 Gm37235-201ENSMUST00000195171 59 ntBASIC4.75□□□□□ -1.65
Pcdh1F7BJK1 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC4.75□□□□□ -1.65
Pcdh1F7BJK1 Chaer1-201ENSMUST00000201649 651 ntTSL 5 BASIC4.75□□□□□ -1.65
Pcdh1F7BJK1 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC4.75□□□□□ -1.65
Pcdh1F7BJK1 AC112956.1-201ENSMUST00000213563 492 ntBASIC4.75□□□□□ -1.65
Pcdh1F7BJK1 AC093926.1-201ENSMUST00000213730 243 ntBASIC4.75□□□□□ -1.65
Pcdh1F7BJK1 AL669916.5-201ENSMUST00000214874 361 ntBASIC4.75□□□□□ -1.65
Pcdh1F7BJK1 AC160031.1-201ENSMUST00000219914 522 ntBASIC4.75□□□□□ -1.65
Pcdh1F7BJK1 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Pcdh1F7BJK1 AC115289.1-201ENSMUST00000224915 522 ntBASIC4.75□□□□□ -1.65
Pcdh1F7BJK1 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC4.75□□□□□ -1.65
Pcdh1F7BJK1 Gm23515-201ENSMUST00000082829 107 ntBASIC4.75□□□□□ -1.65
Pcdh1F7BJK1 Gm23511-201ENSMUST00000083084 164 ntBASIC4.75□□□□□ -1.65
Pcdh1F7BJK1 Mir143-201ENSMUST00000083511 63 ntBASIC4.75□□□□□ -1.65
Pcdh1F7BJK1 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Pcdh1F7BJK1 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Pcdh1F7BJK1 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
Pcdh1F7BJK1 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Pcdh1F7BJK1 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Pcdh1F7BJK1 AC122887.2-201ENSMUST00000219465 1603 ntBASIC4.75□□□□□ -1.65
Pcdh1F7BJK1 Gm43428-201ENSMUST00000200108 3845 ntBASIC4.75□□□□□ -1.65
Pcdh1F7BJK1 Gm3616-201ENSMUST00000174430 2514 ntBASIC4.75□□□□□ -1.65
Pcdh1F7BJK1 Gm3683-201ENSMUST00000175701 2513 ntBASIC4.75□□□□□ -1.65
Pcdh1F7BJK1 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Pcdh1F7BJK1 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Pcdh1F7BJK1 Evi2-202ENSMUST00000170422 3944 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Pcdh1F7BJK1 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Pcdh1F7BJK1 Gm44078-201ENSMUST00000204652 2646 ntBASIC4.75□□□□□ -1.65
Pcdh1F7BJK1 Olfr1057-202ENSMUST00000217435 3249 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 90.7 ms